RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 POTEB2H3BUK9 544 aa11.09□□□□□ -0.63
GDE1-204ENST00000569773 IER5LQ5T953 404 aa11.08□□□□□ -0.64
GDE1-204ENST00000569773 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
GDE1-204ENST00000569773 DPY19L2Q6NUT2 758 aa11.07□□□□□ -0.64
GDE1-204ENST00000569773 SCUBE2Q9NQ36 999 aa11.07□□□□□ -0.64
GDE1-204ENST00000569773 PDCD7Q8N8D1 485 aaKnown RBP11.06□□□□□ -0.64
GDE1-204ENST00000569773 OCEL1Q9H607 264 aa11.04□□□□□ -0.64
GDE1-204ENST00000569773 PLCG2P16885 1265 aa11.02□□□□□ -0.65
GDE1-204ENST00000569773 PCDH10Q9P2E7 1040 aa11.02□□□□□ -0.65
GDE1-204ENST00000569773 NCAPD3P42695 1498 aa11□□□□□ -0.65
GDE1-204ENST00000569773 COLQQ9Y215 455 aaPredicted RBP11□□□□□ -0.65
GDE1-204ENST00000569773 SEC24BO95487 1268 aa10.99□□□□□ -0.65
GDE1-204ENST00000569773 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
GDE1-204ENST00000569773 WDR70Q9NW82 654 aa10.98□□□□□ -0.65
GDE1-204ENST00000569773 MICALL2Q8IY33 904 aa10.97□□□□□ -0.65
GDE1-204ENST00000569773 BCANQ96GW7 911 aa10.97□□□□□ -0.65
GDE1-204ENST00000569773 NCKAP5LQ9HCH0 1330 aa10.97□□□□□ -0.65
GDE1-204ENST00000569773 ATAD2BQ9ULI0 1458 aa10.96□□□□□ -0.65
GDE1-204ENST00000569773 POTEFA5A3E0 1075 aa10.96□□□□□ -0.65
GDE1-204ENST00000569773 POTEMA6NI47 508 aa10.95□□□□□ -0.66
GDE1-204ENST00000569773 BOLA1Q9Y3E2 137 aa10.95□□□□□ -0.66
GDE1-204ENST00000569773 HMGXB3Q12766 1538 aa10.94□□□□□ -0.66
GDE1-204ENST00000569773 LARP6Q9BRS8 491 aaKnown RBP10.94□□□□□ -0.66
GDE1-204ENST00000569773 CRISPLD2Q9H0B8 497 aa10.94□□□□□ -0.66
GDE1-204ENST00000569773 PLSCR2Q9NRY7 297 aa10.94□□□□□ -0.66
GDE1-204ENST00000569773 G3V3G9 751 aa10.93□□□□□ -0.66
GDE1-204ENST00000569773 PDE4AP27815 886 aa10.93□□□□□ -0.66
GDE1-204ENST00000569773 SMARCA2P51531 1590 aa10.93□□□□□ -0.66
GDE1-204ENST00000569773 POTEGQ6S5H5 508 aa10.92□□□□□ -0.66
GDE1-204ENST00000569773 PEG3Q9GZU2 1588 aa10.91□□□□□ -0.66
GDE1-204ENST00000569773 L3MBTL3Q96JM7 780 aaPredicted RBP10.91□□□□□ -0.66
GDE1-204ENST00000569773 TMEM121BQ9BXQ6 578 aaPredicted RBP10.91□□□□□ -0.66
GDE1-204ENST00000569773 POTEJP0CG39 1038 aa10.9□□□□□ -0.66
GDE1-204ENST00000569773 BAZ1AQ9NRL2 1556 aaPredicted RBP10.9□□□□□ -0.67
GDE1-204ENST00000569773 KCNV2Q8TDN2 545 aa10.89□□□□□ -0.67
GDE1-204ENST00000569773 MFSD10Q14728 455 aa10.88□□□□□ -0.67
GDE1-204ENST00000569773 P3H3Q8IVL6 736 aa10.88□□□□□ -0.67
GDE1-204ENST00000569773 DDX27Q96GQ7 796 aaKnown RBP10.88□□□□□ -0.67
GDE1-204ENST00000569773 NBR1Q14596 966 aa10.86□□□□□ -0.67
GDE1-204ENST00000569773 GPHNQ9NQX3 736 aaPredicted RBP10.86□□□□□ -0.67
GDE1-204ENST00000569773 CUX2O14529 1486 aa10.86□□□□□ -0.67
GDE1-204ENST00000569773 E2F4Q16254 413 aa10.85□□□□□ -0.67
GDE1-204ENST00000569773 MROH2BQ7Z745 1585 aa10.83□□□□□ -0.68
GDE1-204ENST00000569773 TMC2Q8TDI7 906 aa10.83□□□□□ -0.68
GDE1-204ENST00000569773 NESP48681 1621 aa10.83□□□□□ -0.68
GDE1-204ENST00000569773 BAZ1BQ9UIG0 1483 aaKnown RBP10.82□□□□□ -0.68
GDE1-204ENST00000569773 PPP1R15BQ5SWA1 713 aa10.82□□□□□ -0.68
GDE1-204ENST00000569773 C2orf72A6NCS6 295 aa10.81□□□□□ -0.68
GDE1-204ENST00000569773 DSG2Q14126 1118 aa10.81□□□□□ -0.68
GDE1-204ENST00000569773 TMEM92Q6UXU6 159 aa10.81□□□□□ -0.68
GDE1-204ENST00000569773 FAM163AQ96GL9 167 aaPredicted RBP10.81□□□□□ -0.68
GDE1-204ENST00000569773 ERCC6Q03468 1493 aa10.8□□□□□ -0.68
GDE1-204ENST00000569773 KIF3CO14782 793 aa10.79□□□□□ -0.68
GDE1-204ENST00000569773 C3orf67Q6ZVT6 689 aa10.79□□□□□ -0.68
GDE1-204ENST00000569773 THOC2Q8NI27 1593 aaKnown RBP10.78□□□□□ -0.68
GDE1-204ENST00000569773 FOXK1P85037 733 aa10.78□□□□□ -0.68
GDE1-204ENST00000569773 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.69
GDE1-204ENST00000569773 CAMK2BQ13554 666 aa10.76□□□□□ -0.69
GDE1-204ENST00000569773 ARHGEF1Q92888 912 aaKnown RBP10.76□□□□□ -0.69
GDE1-204ENST00000569773 KIF21AQ7Z4S6 1674 aa10.76□□□□□ -0.69
GDE1-204ENST00000569773 PLPP6Q8IY26 295 aa10.75□□□□□ -0.69
GDE1-204ENST00000569773 WIZO95785 1651 aa10.72□□□□□ -0.69
GDE1-204ENST00000569773 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
GDE1-204ENST00000569773 EMILIN3Q9NT22 766 aa10.71□□□□□ -0.69
GDE1-204ENST00000569773 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.71□□□□□ -0.69
GDE1-204ENST00000569773 LCE2DQ5TA82 110 aaPredicted RBP10.7□□□□□ -0.7
GDE1-204ENST00000569773 SNPHO15079 494 aa10.69□□□□□ -0.7
GDE1-204ENST00000569773 ARIH1Q9Y4X5 557 aaPredicted RBP10.69□□□□□ -0.7
GDE1-204ENST00000569773 DPYSL4O14531 572 aa10.66□□□□□ -0.7
GDE1-204ENST00000569773 SEMA3EO15041 775 aa10.66□□□□□ -0.7
GDE1-204ENST00000569773 UPF1Q92900 1129 aaKnown RBP eCLIP10.64□□□□□ -0.71
GDE1-204ENST00000569773 PDS5BQ9NTI5 1447 aa10.63□□□□□ -0.71
GDE1-204ENST00000569773 CADPSQ9ULU8 1353 aa10.63□□□□□ -0.71
GDE1-204ENST00000569773 PRKCSHP14314 528 aaPredicted RBP10.61□□□□□ -0.71
GDE1-204ENST00000569773 TPRNQ4KMQ1 711 aa10.61□□□□□ -0.71
GDE1-204ENST00000569773 WDR62O43379 1518 aa10.6□□□□□ -0.71
GDE1-204ENST00000569773 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
GDE1-204ENST00000569773 MAP3K9P80192 1104 aa10.6□□□□□ -0.71
GDE1-204ENST00000569773 OXER1Q8TDS5 423 aa10.59□□□□□ -0.71
GDE1-204ENST00000569773 RSF1Q96T23 1441 aaPredicted RBP10.58□□□□□ -0.72
GDE1-204ENST00000569773 ST18O60284 1047 aa10.58□□□□□ -0.72
GDE1-204ENST00000569773 PDIA6Q15084 440 aa10.58□□□□□ -0.72
GDE1-204ENST00000569773 CDAN1Q8IWY9 1227 aa10.58□□□□□ -0.72
GDE1-204ENST00000569773 MRC2Q9UBG0 1479 aa10.57□□□□□ -0.72
GDE1-204ENST00000569773 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
GDE1-204ENST00000569773 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
GDE1-204ENST00000569773 TOP2AP11388 1531 aaKnown RBP10.56□□□□□ -0.72
GDE1-204ENST00000569773 PRDM2Q13029 1718 aa10.55□□□□□ -0.72
GDE1-204ENST00000569773 TULP1O00294 542 aaPredicted RBP10.55□□□□□ -0.72
GDE1-204ENST00000569773 MLLT3P42568 568 aaPredicted RBP10.55□□□□□ -0.72
GDE1-204ENST00000569773 LMOD2Q6P5Q4 547 aa10.55□□□□□ -0.72
GDE1-204ENST00000569773 CFTRP13569 1480 aa10.55□□□□□ -0.72
GDE1-204ENST00000569773 SLC34A2O95436 690 aa10.54□□□□□ -0.72
GDE1-204ENST00000569773 PTCD2Q8WV60 388 aaKnown RBP10.54□□□□□ -0.72
GDE1-204ENST00000569773 TBC1D12O60347 775 aa10.52□□□□□ -0.73
GDE1-204ENST00000569773 FANCD2Q9BXW9 1451 aa10.52□□□□□ -0.73
GDE1-204ENST00000569773 CEP164Q9UPV0 1460 aa10.52□□□□□ -0.73
GDE1-204ENST00000569773 SMYD5Q6GMV2 418 aa10.51□□□□□ -0.73
GDE1-204ENST00000569773 EVI5O60447 810 aa10.5□□□□□ -0.73
GDE1-204ENST00000569773 PCDHGA4Q9Y5G9 962 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms