RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 CDK11AQ9UQ88 783 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-213ENST00000569687 HECW1Q76N89 1606 aa7.88□□□□□ -1.15
SF3B3-213ENST00000569687 TCOF1Q13428 1488 aaKnown RBP7.87□□□□□ -1.15
SF3B3-213ENST00000569687 LRRIQ1Q96JM4 1722 aa7.86□□□□□ -1.15
SF3B3-213ENST00000569687 RAPGEF6Q8TEU7 1601 aa7.86□□□□□ -1.15
SF3B3-213ENST00000569687 HAP1P54257 671 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-213ENST00000569687 U3KPZ7 1027 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-213ENST00000569687 MAGI3Q5TCQ9 1506 aa7.86□□□□□ -1.15
SF3B3-213ENST00000569687 SUPT6HQ7KZ85 1726 aaKnown RBP7.86□□□□□ -1.15
SF3B3-213ENST00000569687 ERCC6L2Q5T890 1561 aa7.85□□□□□ -1.15
SF3B3-213ENST00000569687 OSCARQ8IYS5 282 aa7.85□□□□□ -1.15
SF3B3-213ENST00000569687 NUP153P49790 1475 aaKnown RBP7.85□□□□□ -1.15
SF3B3-213ENST00000569687 HFM1A2PYH4 1435 aa7.85□□□□□ -1.15
SF3B3-213ENST00000569687 PTPRKQ15262 1439 aa7.85□□□□□ -1.15
SF3B3-213ENST00000569687 PLB1Q6P1J6 1458 aa7.84□□□□□ -1.15
SF3B3-213ENST00000569687 PTPRGP23470 1445 aa7.84□□□□□ -1.15
SF3B3-213ENST00000569687 ABCA8O94911 1581 aa7.84□□□□□ -1.15
SF3B3-213ENST00000569687 ZNF219Q9P2Y4 722 aaPredicted RBP7.83□□□□□ -1.16
SF3B3-213ENST00000569687 AKNAQ7Z591 1439 aa7.83□□□□□ -1.16
SF3B3-213ENST00000569687 NAIPQ13075 1403 aa7.82□□□□□ -1.16
SF3B3-213ENST00000569687 MAPKBP1O60336 1514 aa7.82□□□□□ -1.16
SF3B3-213ENST00000569687 CDK13Q14004 1512 aaKnown RBP7.82□□□□□ -1.16
SF3B3-213ENST00000569687 PTPN23Q9H3S7 1636 aa7.81□□□□□ -1.16
SF3B3-213ENST00000569687 TROQ12816 1431 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-213ENST00000569687 UACAQ9BZF9 1416 aa7.81□□□□□ -1.16
SF3B3-213ENST00000569687 SPDYE4A6NLX3 237 aa7.81□□□□□ -1.16
SF3B3-213ENST00000569687 ROCK1Q13464 1354 aa7.81□□□□□ -1.16
SF3B3-213ENST00000569687 PRKCSHP14314 528 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-213ENST00000569687 ABCC2Q92887 1545 aa7.79□□□□□ -1.16
SF3B3-213ENST00000569687 PLEKHD1A6NEE1 506 aa7.79□□□□□ -1.16
SF3B3-213ENST00000569687 PPP1R15AO75807 674 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-213ENST00000569687 VASPP50552 380 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-213ENST00000569687 BCANQ96GW7 911 aa7.79□□□□□ -1.16
SF3B3-213ENST00000569687 SIN3AQ96ST3 1273 aa7.78□□□□□ -1.16
SF3B3-213ENST00000569687 UHRF1BP1LA0JNW5 1464 aa7.78□□□□□ -1.16
SF3B3-213ENST00000569687 ATP10BO94823 1461 aa7.78□□□□□ -1.16
SF3B3-213ENST00000569687 ARID3CA6NKF2 412 aa7.77□□□□□ -1.17
SF3B3-213ENST00000569687 GPATCH8Q9UKJ3 1502 aaKnown RBP7.77□□□□□ -1.17
SF3B3-213ENST00000569687 ABCC5O15440 1437 aa7.77□□□□□ -1.17
SF3B3-213ENST00000569687 CFDP1Q9UEE9 299 aaPredicted RBP7.76□□□□□ -1.17
SF3B3-213ENST00000569687 IFNLR1Q8IU57 520 aaPredicted RBP7.75□□□□□ -1.17
SF3B3-213ENST00000569687 PROM2Q8N271 834 aa7.75□□□□□ -1.17
SF3B3-213ENST00000569687 RRP7BPQ9NSQ0 103 aa7.75□□□□□ -1.17
SF3B3-213ENST00000569687 DAPK1P53355 1430 aa7.75□□□□□ -1.17
SF3B3-213ENST00000569687 ADCY10Q96PN6 1610 aa7.74□□□□□ -1.17
SF3B3-213ENST00000569687 NEUROD1Q13562 356 aa7.74□□□□□ -1.17
SF3B3-213ENST00000569687 MPHOSPH9Q99550 1183 aa7.74□□□□□ -1.17
SF3B3-213ENST00000569687 CHIC2Q9UKJ5 165 aa7.74□□□□□ -1.17
SF3B3-213ENST00000569687 ZNF644Q9H582 1327 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-213ENST00000569687 ABCC10Q5T3U5 1492 aa7.74□□□□□ -1.17
SF3B3-213ENST00000569687 KDM5BQ9UGL1 1544 aa7.73□□□□□ -1.17
SF3B3-213ENST00000569687 MKRN4PQ13434 485 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-213ENST00000569687 RSPH4AQ5TD94 716 aa7.73□□□□□ -1.17
SF3B3-213ENST00000569687 MIER1Q8N108 512 aa7.73□□□□□ -1.17
SF3B3-213ENST00000569687 TAOK2Q9UL54 1235 aa7.73□□□□□ -1.17
SF3B3-213ENST00000569687 ZCCHC11Q5TAX3 1644 aaKnown RBP7.73□□□□□ -1.17
SF3B3-213ENST00000569687 NCOA1Q15788 1441 aa7.72□□□□□ -1.17
SF3B3-213ENST00000569687 DNMT1P26358 1616 aaKnown RBP7.72□□□□□ -1.17
SF3B3-213ENST00000569687 PKD2Q13563 968 aa7.72□□□□□ -1.17
SF3B3-213ENST00000569687 VSIG10Q8N0Z9 540 aa7.72□□□□□ -1.17
SF3B3-213ENST00000569687 KIF14Q15058 1648 aa7.71□□□□□ -1.17
SF3B3-213ENST00000569687 ADGRL2O95490 1459 aa7.71□□□□□ -1.18
SF3B3-213ENST00000569687 RIMBP3CA6NJZ7 1639 aa7.7□□□□□ -1.18
SF3B3-213ENST00000569687 RIMBP3BA6NNM3 1639 aa7.7□□□□□ -1.18
SF3B3-213ENST00000569687 RIMBP3Q9UFD9 1639 aa7.7□□□□□ -1.18
SF3B3-213ENST00000569687 GCC2Q8IWJ2 1684 aa7.7□□□□□ -1.18
SF3B3-213ENST00000569687 DENND4BO75064 1496 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-213ENST00000569687 TRIM52Q96A61 297 aa7.7□□□□□ -1.18
SF3B3-213ENST00000569687 CAMSAP2Q08AD1 1489 aa7.69□□□□□ -1.18
SF3B3-213ENST00000569687 ITSN2Q9NZM3 1697 aa7.69□□□□□ -1.18
SF3B3-213ENST00000569687 TONSLQ96HA7 1378 aa7.69□□□□□ -1.18
SF3B3-213ENST00000569687 ANKRD30BQ9BXX2 1392 aa7.69□□□□□ -1.18
SF3B3-213ENST00000569687 ANKRD30AQ9BXX3 1397 aa7.69□□□□□ -1.18
SF3B3-213ENST00000569687 CENPBP07199 599 aaPredicted RBP7.68□□□□□ -1.18
SF3B3-213ENST00000569687 TSPY4P0CV99 314 aa7.68□□□□□ -1.18
SF3B3-213ENST00000569687 TSPY10P0CW01 314 aa7.68□□□□□ -1.18
SF3B3-213ENST00000569687 SHANK2Q9UPX8 1470 aa7.68□□□□□ -1.18
SF3B3-213ENST00000569687 MBD5Q9P267 1494 aa7.67□□□□□ -1.18
SF3B3-213ENST00000569687 WDR7Q9Y4E6 1490 aa7.67□□□□□ -1.18
SF3B3-213ENST00000569687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.67□□□□□ -1.18
SF3B3-213ENST00000569687 KDM6BO15054 1643 aa7.67□□□□□ -1.18
SF3B3-213ENST00000569687 ZNF777Q9ULD5 760 aaPredicted RBP7.66□□□□□ -1.18
SF3B3-213ENST00000569687 KIAA1107Q9UPP5 1409 aa7.66□□□□□ -1.18
SF3B3-213ENST00000569687 CDC42BPAQ5VT25 1732 aa7.66□□□□□ -1.18
SF3B3-213ENST00000569687 ARHGEF5Q12774 1597 aa7.65□□□□□ -1.18
SF3B3-213ENST00000569687 TTC37Q6PGP7 1564 aa7.65□□□□□ -1.18
SF3B3-213ENST00000569687 PREX2Q70Z35 1606 aa7.65□□□□□ -1.18
SF3B3-213ENST00000569687 ASXL2Q76L83 1435 aa7.65□□□□□ -1.18
SF3B3-213ENST00000569687 ANKRD50Q9ULJ7 1429 aa7.64□□□□□ -1.19
SF3B3-213ENST00000569687 NPM1P06748 294 aaKnown RBP eCLIP7.64□□□□□ -1.19
SF3B3-213ENST00000569687 HNRNPMP52272 730 aaKnown RBP eCLIP7.64□□□□□ -1.19
SF3B3-213ENST00000569687 L3MBTL2Q969R5 705 aa7.64□□□□□ -1.19
SF3B3-213ENST00000569687 KDM2AQ9Y2K7 1162 aa7.64□□□□□ -1.19
SF3B3-213ENST00000569687 PZPP20742 1482 aa7.63□□□□□ -1.19
SF3B3-213ENST00000569687 RPRD2Q5VT52 1461 aaKnown RBP7.63□□□□□ -1.19
SF3B3-213ENST00000569687 C9orf84Q5VXU9 1444 aa7.63□□□□□ -1.19
SF3B3-213ENST00000569687 CYB5RLQ6IPT4 315 aa7.63□□□□□ -1.19
SF3B3-213ENST00000569687 PLEKHH2Q8IVE3 1493 aa7.62□□□□□ -1.19
SF3B3-213ENST00000569687 PLCH2O75038 1416 aa7.62□□□□□ -1.19
SF3B3-213ENST00000569687 MYO5CQ9NQX4 1742 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms