RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 CFAP74Q9C0B2 1584 aa14.14□□□□□ -0.15
CHD9-219ENST00000569225 MYO5CQ9NQX4 1742 aa14.13□□□□□ -0.15
CHD9-219ENST00000569225 AKNAQ7Z591 1439 aa14.12□□□□□ -0.15
CHD9-219ENST00000569225 PREX2Q70Z35 1606 aa14.11□□□□□ -0.15
CHD9-219ENST00000569225 ZNF777Q9ULD5 760 aaPredicted RBP14.1□□□□□ -0.15
CHD9-219ENST00000569225 ADGRL1O94910 1474 aa14.09□□□□□ -0.15
CHD9-219ENST00000569225 KDM6BO15054 1643 aa14.09□□□□□ -0.15
CHD9-219ENST00000569225 MYOM3Q5VTT5 1437 aa14.08□□□□□ -0.15
CHD9-219ENST00000569225 ITSN2Q9NZM3 1697 aa14.08□□□□□ -0.15
CHD9-219ENST00000569225 PLEKHH2Q8IVE3 1493 aa14.08□□□□□ -0.16
CHD9-219ENST00000569225 DENND4BO75064 1496 aaPredicted RBP14.07□□□□□ -0.16
CHD9-219ENST00000569225 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
CHD9-219ENST00000569225 MIA2Q96PC5 1412 aa14.07□□□□□ -0.16
CHD9-219ENST00000569225 SCAPERQ9BY12 1400 aa14.07□□□□□ -0.16
CHD9-219ENST00000569225 PPARGC1BQ86YN6 1023 aaKnown RBP14.06□□□□□ -0.16
CHD9-219ENST00000569225 CDC42BPBQ9Y5S2 1711 aa14.05□□□□□ -0.16
CHD9-219ENST00000569225 KIAA1107Q9UPP5 1409 aa14.05□□□□□ -0.16
CHD9-219ENST00000569225 COL17A1Q9UMD9 1497 aaPredicted RBP14.05□□□□□ -0.16
CHD9-219ENST00000569225 POGZQ7Z3K3 1410 aa14.04□□□□□ -0.16
CHD9-219ENST00000569225 ABCC1P33527 1531 aa14.03□□□□□ -0.16
CHD9-219ENST00000569225 RAPGEF3O95398 923 aa14.03□□□□□ -0.16
CHD9-219ENST00000569225 FGD6Q6ZV73 1430 aa14.02□□□□□ -0.16
CHD9-219ENST00000569225 SAMD9LQ8IVG5 1584 aa14.02□□□□□ -0.16
CHD9-219ENST00000569225 ZNF518AQ6AHZ1 1483 aa14.02□□□□□ -0.17
CHD9-219ENST00000569225 ZNF644Q9H582 1327 aaPredicted RBP14.02□□□□□ -0.17
CHD9-219ENST00000569225 CAMSAP2Q08AD1 1489 aa14.01□□□□□ -0.17
CHD9-219ENST00000569225 RSPH4AQ5TD94 716 aa14.01□□□□□ -0.17
CHD9-219ENST00000569225 HNRNPMP52272 730 aaKnown RBP eCLIP14□□□□□ -0.17
CHD9-219ENST00000569225 SYCP2Q9BX26 1530 aa14□□□□□ -0.17
CHD9-219ENST00000569225 ARHGEF12Q9NZN5 1544 aa13.99□□□□□ -0.17
CHD9-219ENST00000569225 AFAP1Q8N556 730 aa13.99□□□□□ -0.17
CHD9-219ENST00000569225 TRAPPC8Q9Y2L5 1435 aa13.98□□□□□ -0.17
CHD9-219ENST00000569225 MAGI2Q86UL8 1455 aa13.97□□□□□ -0.17
CHD9-219ENST00000569225 MYT1LQ9UL68 1186 aa13.97□□□□□ -0.17
CHD9-219ENST00000569225 TCOF1Q13428 1488 aaKnown RBP13.97□□□□□ -0.17
CHD9-219ENST00000569225 MBD5Q9P267 1494 aa13.97□□□□□ -0.17
CHD9-219ENST00000569225 FRMPD1Q5SYB0 1578 aa13.97□□□□□ -0.17
CHD9-219ENST00000569225 ZMYM4Q5VZL5 1548 aa13.96□□□□□ -0.17
CHD9-219ENST00000569225 PTPN23Q9H3S7 1636 aa13.96□□□□□ -0.18
CHD9-219ENST00000569225 SPAG9O60271 1321 aaKnown RBP13.96□□□□□ -0.18
CHD9-219ENST00000569225 CCDC141Q6ZP82 1450 aa13.95□□□□□ -0.18
CHD9-219ENST00000569225 FAM50AQ14320 339 aaKnown RBP13.95□□□□□ -0.18
CHD9-219ENST00000569225 RICTORQ6R327 1708 aa13.95□□□□□ -0.18
CHD9-219ENST00000569225 KDM5CP41229 1560 aa13.95□□□□□ -0.18
CHD9-219ENST00000569225 TSPY4P0CV99 314 aa13.95□□□□□ -0.18
CHD9-219ENST00000569225 TSPY10P0CW01 314 aa13.95□□□□□ -0.18
CHD9-219ENST00000569225 ARHGEF5Q12774 1597 aa13.94□□□□□ -0.18
CHD9-219ENST00000569225 MLH3Q9UHC1 1453 aa13.94□□□□□ -0.18
CHD9-219ENST00000569225 ZFYVE16Q7Z3T8 1539 aa13.92□□□□□ -0.18
CHD9-219ENST00000569225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHD9-219ENST00000569225 HECW2Q9P2P5 1572 aa13.91□□□□□ -0.18
CHD9-219ENST00000569225 RRBP1Q9P2E9 1410 aaKnown RBP13.91□□□□□ -0.18
CHD9-219ENST00000569225 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.18
CHD9-219ENST00000569225 ARHGEF40Q8TER5 1519 aa13.9□□□□□ -0.18
CHD9-219ENST00000569225 YEATS2Q9ULM3 1422 aa13.9□□□□□ -0.18
CHD9-219ENST00000569225 ABCC5O15440 1437 aa13.89□□□□□ -0.19
CHD9-219ENST00000569225 DAPK1P53355 1430 aa13.89□□□□□ -0.19
CHD9-219ENST00000569225 C9orf84Q5VXU9 1444 aa13.88□□□□□ -0.19
CHD9-219ENST00000569225 SHANK2Q9UPX8 1470 aa13.88□□□□□ -0.19
CHD9-219ENST00000569225 ATP7AQ04656 1500 aa13.88□□□□□ -0.19
CHD9-219ENST00000569225 ATP10AO60312 1499 aa13.88□□□□□ -0.19
CHD9-219ENST00000569225 DNMT1P26358 1616 aaKnown RBP13.87□□□□□ -0.19
CHD9-219ENST00000569225 INO80Q9ULG1 1556 aaPredicted RBP13.87□□□□□ -0.19
CHD9-219ENST00000569225 MAST1Q9Y2H9 1570 aa13.85□□□□□ -0.19
CHD9-219ENST00000569225 ARID4BQ4LE39 1312 aaPredicted RBP13.85□□□□□ -0.19
CHD9-219ENST00000569225 ANKRD30AQ9BXX3 1397 aa13.84□□□□□ -0.19
CHD9-219ENST00000569225 DIP2CQ9Y2E4 1556 aa13.84□□□□□ -0.19
CHD9-219ENST00000569225 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.2
CHD9-219ENST00000569225 ITGAEP38570 1179 aa13.83□□□□□ -0.2
CHD9-219ENST00000569225 CHIC2Q9UKJ5 165 aa13.82□□□□□ -0.2
CHD9-219ENST00000569225 ABCA6Q8N139 1617 aa13.82□□□□□ -0.2
CHD9-219ENST00000569225 A2MP01023 1474 aa13.82□□□□□ -0.2
CHD9-219ENST00000569225 REREQ9P2R6 1566 aa13.82□□□□□ -0.2
CHD9-219ENST00000569225 CROCC2H7BZ55 1655 aa13.81□□□□□ -0.2
CHD9-219ENST00000569225 DHX29Q7Z478 1369 aaKnown RBP13.81□□□□□ -0.2
CHD9-219ENST00000569225 KIF15Q9NS87 1388 aa13.8□□□□□ -0.2
CHD9-219ENST00000569225 ADGRL2O95490 1459 aa13.8□□□□□ -0.2
CHD9-219ENST00000569225 PLXNC1O60486 1568 aa13.8□□□□□ -0.2
CHD9-219ENST00000569225 ROCK1Q13464 1354 aa13.8□□□□□ -0.2
CHD9-219ENST00000569225 RRP7BPQ9NSQ0 103 aa13.79□□□□□ -0.2
CHD9-219ENST00000569225 NCOA1Q15788 1441 aa13.79□□□□□ -0.2
CHD9-219ENST00000569225 AGLP35573 1532 aa13.79□□□□□ -0.2
CHD9-219ENST00000569225 ADGBQ8N7X0 1667 aa13.78□□□□□ -0.2
CHD9-219ENST00000569225 PTPRKQ15262 1439 aa13.78□□□□□ -0.2
CHD9-219ENST00000569225 DUOX2Q9NRD8 1548 aa13.78□□□□□ -0.2
CHD9-219ENST00000569225 ERBINQ96RT1 1412 aa13.76□□□□□ -0.21
CHD9-219ENST00000569225 KIF3BO15066 747 aa13.74□□□□□ -0.21
CHD9-219ENST00000569225 MLECQ14165 292 aa13.74□□□□□ -0.21
CHD9-219ENST00000569225 ESF1Q9H501 851 aaKnown RBP13.73□□□□□ -0.21
CHD9-219ENST00000569225 ANKRD50Q9ULJ7 1429 aa13.73□□□□□ -0.21
CHD9-219ENST00000569225 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
CHD9-219ENST00000569225 GGT6Q6P531 493 aa13.72□□□□□ -0.21
CHD9-219ENST00000569225 EIF2AK4Q9P2K8 1649 aaKnown RBP13.7□□□□□ -0.22
CHD9-219ENST00000569225 BCORL1Q5H9F3 1711 aa13.7□□□□□ -0.22
CHD9-219ENST00000569225 SIGLEC1Q9BZZ2 1709 aa13.7□□□□□ -0.22
CHD9-219ENST00000569225 HFM1A2PYH4 1435 aa13.69□□□□□ -0.22
CHD9-219ENST00000569225 KDM4FA0A1W2PPD8 638 aa13.68□□□□□ -0.22
CHD9-219ENST00000569225 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
CHD9-219ENST00000569225 NAIPQ13075 1403 aa13.67□□□□□ -0.22
CHD9-219ENST00000569225 KANK1Q14678 1352 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms