RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 FBXO41Q8TF61 875 aa10.63□□□□□ -0.71
CDH13-212ENST00000569144 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
CDH13-212ENST00000569144 TNIKQ9UKE5 1360 aa10.6□□□□□ -0.71
CDH13-212ENST00000569144 TEX14Q8IWB6 1497 aa10.6□□□□□ -0.71
CDH13-212ENST00000569144 UHRF1BP1LA0JNW5 1464 aa10.59□□□□□ -0.71
CDH13-212ENST00000569144 MAP3K4Q9Y6R4 1608 aa10.58□□□□□ -0.72
CDH13-212ENST00000569144 EPRSP07814 1512 aaKnown RBP10.58□□□□□ -0.72
CDH13-212ENST00000569144 CARMIL2Q6F5E8 1435 aa10.58□□□□□ -0.72
CDH13-212ENST00000569144 IGF1RP08069 1367 aa10.57□□□□□ -0.72
CDH13-212ENST00000569144 NUBP1P53384 320 aa10.57□□□□□ -0.72
CDH13-212ENST00000569144 TTBK1Q5TCY1 1321 aaPredicted RBP10.57□□□□□ -0.72
CDH13-212ENST00000569144 HAX1O00165 279 aa10.56□□□□□ -0.72
CDH13-212ENST00000569144 UACAQ9BZF9 1416 aa10.56□□□□□ -0.72
CDH13-212ENST00000569144 CUL7Q14999 1698 aa10.56□□□□□ -0.72
CDH13-212ENST00000569144 KDM5BQ9UGL1 1544 aa10.54□□□□□ -0.72
CDH13-212ENST00000569144 CD44P16070 742 aaKnown RBP10.54□□□□□ -0.72
CDH13-212ENST00000569144 RASEFQ8IZ41 740 aa10.54□□□□□ -0.72
CDH13-212ENST00000569144 KIF27Q86VH2 1401 aa10.53□□□□□ -0.72
CDH13-212ENST00000569144 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
CDH13-212ENST00000569144 TSPYL2Q9H2G4 693 aaPredicted RBP10.51□□□□□ -0.73
CDH13-212ENST00000569144 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
CDH13-212ENST00000569144 FAM212AQ96EL1 285 aa10.5□□□□□ -0.73
CDH13-212ENST00000569144 IQGAP2Q13576 1575 aa10.5□□□□□ -0.73
CDH13-212ENST00000569144 DISP1Q96F81 1524 aa10.49□□□□□ -0.73
CDH13-212ENST00000569144 ZCCHC11Q5TAX3 1644 aaKnown RBP10.49□□□□□ -0.73
CDH13-212ENST00000569144 SUPT5HO00267 1087 aaKnown RBP10.49□□□□□ -0.73
CDH13-212ENST00000569144 CARMIL1Q5VZK9 1371 aa10.49□□□□□ -0.73
CDH13-212ENST00000569144 DCAF8Q5TAQ9 597 aa10.48□□□□□ -0.73
CDH13-212ENST00000569144 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
CDH13-212ENST00000569144 WDR7Q9Y4E6 1490 aa10.48□□□□□ -0.73
CDH13-212ENST00000569144 MAGI3Q5TCQ9 1506 aa10.48□□□□□ -0.73
CDH13-212ENST00000569144 EVX2Q03828 476 aa10.46□□□□□ -0.73
CDH13-212ENST00000569144 CIZ1Q9ULV3 898 aaPredicted RBP10.46□□□□□ -0.73
CDH13-212ENST00000569144 LMTK3Q96Q04 1460 aa10.45□□□□□ -0.74
CDH13-212ENST00000569144 CD109Q6YHK3 1445 aa10.45□□□□□ -0.74
CDH13-212ENST00000569144 KIF21BO75037 1637 aa10.44□□□□□ -0.74
CDH13-212ENST00000569144 GSE1Q14687 1217 aa10.44□□□□□ -0.74
CDH13-212ENST00000569144 UGGT2Q9NYU1 1516 aa10.43□□□□□ -0.74
CDH13-212ENST00000569144 PTPRMP28827 1452 aa10.43□□□□□ -0.74
CDH13-212ENST00000569144 CFAP43Q8NDM7 1665 aa10.43□□□□□ -0.74
CDH13-212ENST00000569144 KIAA0556O60303 1618 aa10.41□□□□□ -0.74
CDH13-212ENST00000569144 CCDC61Q9Y6R9 512 aa10.41□□□□□ -0.74
CDH13-212ENST00000569144 ADAMTSL3P82987 1691 aa10.41□□□□□ -0.74
CDH13-212ENST00000569144 PCF11O94913 1555 aaKnown RBP10.4□□□□□ -0.74
CDH13-212ENST00000569144 ARAP3Q8WWN8 1544 aa10.4□□□□□ -0.74
CDH13-212ENST00000569144 ZNF579Q8NAF0 562 aaKnown RBP10.38□□□□□ -0.75
CDH13-212ENST00000569144 KCNH8Q96L42 1107 aa10.38□□□□□ -0.75
CDH13-212ENST00000569144 PHF12Q96QT6 1004 aa10.37□□□□□ -0.75
CDH13-212ENST00000569144 SOCS7O14512 581 aa10.36□□□□□ -0.75
CDH13-212ENST00000569144 PYGBP11216 843 aa10.36□□□□□ -0.75
CDH13-212ENST00000569144 PHLDB1Q86UU1 1377 aa10.36□□□□□ -0.75
CDH13-212ENST00000569144 RAPGEF2Q9Y4G8 1499 aa10.35□□□□□ -0.75
CDH13-212ENST00000569144 ABCA8O94911 1581 aa10.35□□□□□ -0.75
CDH13-212ENST00000569144 PKD2Q13563 968 aa10.34□□□□□ -0.75
CDH13-212ENST00000569144 AMER1Q5JTC6 1135 aaPredicted RBP10.34□□□□□ -0.75
CDH13-212ENST00000569144 MADDQ8WXG6 1647 aa10.33□□□□□ -0.76
CDH13-212ENST00000569144 BCORL1Q5H9F3 1711 aa10.33□□□□□ -0.76
CDH13-212ENST00000569144 CERKQ8TCT0 537 aa10.33□□□□□ -0.76
CDH13-212ENST00000569144 GOLGA3Q08378 1498 aa10.32□□□□□ -0.76
CDH13-212ENST00000569144 ILDR2Q71H61 639 aa10.32□□□□□ -0.76
CDH13-212ENST00000569144 DISP3Q9P2K9 1392 aa10.31□□□□□ -0.76
CDH13-212ENST00000569144 SP7Q8TDD2 431 aaPredicted RBP10.31□□□□□ -0.76
CDH13-212ENST00000569144 KIF12Q96FN5 646 aa10.31□□□□□ -0.76
CDH13-212ENST00000569144 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
CDH13-212ENST00000569144 ECM2O94769 699 aaPredicted RBP10.3□□□□□ -0.76
CDH13-212ENST00000569144 RAPGEF3O95398 923 aa10.3□□□□□ -0.76
CDH13-212ENST00000569144 ARID4BQ4LE39 1312 aaPredicted RBP10.3□□□□□ -0.76
CDH13-212ENST00000569144 NEO1Q92859 1461 aa10.3□□□□□ -0.76
CDH13-212ENST00000569144 ABCA9Q8IUA7 1624 aa10.29□□□□□ -0.76
CDH13-212ENST00000569144 MAP3K13O43283 966 aa10.28□□□□□ -0.76
CDH13-212ENST00000569144 CHRM1P11229 460 aaPredicted RBP10.28□□□□□ -0.76
CDH13-212ENST00000569144 HSPA2P54652 639 aa10.28□□□□□ -0.76
CDH13-212ENST00000569144 FRMPD1Q5SYB0 1578 aa10.27□□□□□ -0.76
CDH13-212ENST00000569144 RIMS1Q86UR5 1692 aaKnown RBP10.27□□□□□ -0.77
CDH13-212ENST00000569144 GABBR2O75899 941 aa10.26□□□□□ -0.77
CDH13-212ENST00000569144 PCDHB13Q9Y5F0 798 aa10.26□□□□□ -0.77
CDH13-212ENST00000569144 ARHGEF40Q8TER5 1519 aa10.26□□□□□ -0.77
CDH13-212ENST00000569144 ATP10BO94823 1461 aa10.25□□□□□ -0.77
CDH13-212ENST00000569144 MS4A3Q96HJ5 214 aa10.25□□□□□ -0.77
CDH13-212ENST00000569144 CTTNBP2Q8WZ74 1663 aa10.25□□□□□ -0.77
CDH13-212ENST00000569144 GALR2O43603 387 aaPredicted RBP10.24□□□□□ -0.77
CDH13-212ENST00000569144 CLCN6P51797 869 aa10.24□□□□□ -0.77
CDH13-212ENST00000569144 SGIP1Q9BQI5 828 aa10.23□□□□□ -0.77
CDH13-212ENST00000569144 POGZQ7Z3K3 1410 aa10.23□□□□□ -0.77
CDH13-212ENST00000569144 ARID3CA6NKF2 412 aa10.22□□□□□ -0.77
CDH13-212ENST00000569144 IFNL1Q8IU54 200 aa10.22□□□□□ -0.77
CDH13-212ENST00000569144 FAM9AQ8IZU1 332 aaPredicted RBP10.22□□□□□ -0.77
CDH13-212ENST00000569144 FANCAO15360 1455 aa10.22□□□□□ -0.77
CDH13-212ENST00000569144 SPATA31D1Q6ZQQ2 1576 aa10.22□□□□□ -0.77
CDH13-212ENST00000569144 PCDHB8Q9UN66 801 aa10.21□□□□□ -0.77
CDH13-212ENST00000569144 AKNAQ7Z591 1439 aa10.21□□□□□ -0.78
CDH13-212ENST00000569144 DENND4BO75064 1496 aaPredicted RBP10.21□□□□□ -0.78
CDH13-212ENST00000569144 RGL2O15211 777 aa10.2□□□□□ -0.78
CDH13-212ENST00000569144 FHOD3Q2V2M9 1422 aa10.2□□□□□ -0.78
CDH13-212ENST00000569144 ZNF467Q7Z7K2 595 aaPredicted RBP10.2□□□□□ -0.78
CDH13-212ENST00000569144 RNF25Q96BH1 459 aaPredicted RBP10.2□□□□□ -0.78
CDH13-212ENST00000569144 TTC37Q6PGP7 1564 aa10.18□□□□□ -0.78
CDH13-212ENST00000569144 YEATS2Q9ULM3 1422 aa10.18□□□□□ -0.78
CDH13-212ENST00000569144 RICTORQ6R327 1708 aa10.18□□□□□ -0.78
CDH13-212ENST00000569144 ZMYM4Q5VZL5 1548 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms