RNA–Protein interactions for RNA: ENST00000569012.5

TCF4-242, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-242ENST00000569012 HECW2Q9P2P5 1572 aa10.42□□□□□ -0.74
TCF4-242ENST00000569012 ABCA9Q8IUA7 1624 aa10.4□□□□□ -0.75
TCF4-242ENST00000569012 P3H3Q8IVL6 736 aa10.39□□□□□ -0.75
TCF4-242ENST00000569012 CEP162Q5TB80 1403 aa10.39□□□□□ -0.75
TCF4-242ENST00000569012 SAMD9Q5K651 1589 aa10.39□□□□□ -0.75
TCF4-242ENST00000569012 POLA2Q14181 598 aa10.38□□□□□ -0.75
TCF4-242ENST00000569012 CLIP1P30622 1438 aa10.38□□□□□ -0.75
TCF4-242ENST00000569012 NEO1Q92859 1461 aa10.36□□□□□ -0.75
TCF4-242ENST00000569012 RAPGEF6Q8TEU7 1601 aa10.36□□□□□ -0.75
TCF4-242ENST00000569012 ARID3CA6NKF2 412 aa10.35□□□□□ -0.75
TCF4-242ENST00000569012 RAPGEF3O95398 923 aa10.34□□□□□ -0.75
TCF4-242ENST00000569012 NUP153P49790 1475 aaKnown RBP10.34□□□□□ -0.75
TCF4-242ENST00000569012 ADAMTSL3P82987 1691 aa10.34□□□□□ -0.75
TCF4-242ENST00000569012 PTPRMP28827 1452 aa10.32□□□□□ -0.76
TCF4-242ENST00000569012 ARHGAP35Q9NRY4 1499 aa10.32□□□□□ -0.76
TCF4-242ENST00000569012 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
TCF4-242ENST00000569012 EFCAB5A4FU69 1503 aa10.32□□□□□ -0.76
TCF4-242ENST00000569012 FHOD3Q2V2M9 1422 aa10.31□□□□□ -0.76
TCF4-242ENST00000569012 FRMPD1Q5SYB0 1578 aa10.31□□□□□ -0.76
TCF4-242ENST00000569012 PLEKHD1A6NEE1 506 aa10.3□□□□□ -0.76
TCF4-242ENST00000569012 ABCB7O75027 752 aa10.29□□□□□ -0.76
TCF4-242ENST00000569012 BCORL1Q5H9F3 1711 aa10.28□□□□□ -0.76
TCF4-242ENST00000569012 SPDYE4A6NLX3 237 aa10.28□□□□□ -0.76
TCF4-242ENST00000569012 AKNAQ7Z591 1439 aa10.27□□□□□ -0.77
TCF4-242ENST00000569012 ZBTB12Q9Y330 459 aaPredicted RBP10.27□□□□□ -0.77
TCF4-242ENST00000569012 DENND4BO75064 1496 aaPredicted RBP10.27□□□□□ -0.77
TCF4-242ENST00000569012 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.27□□□□□ -0.77
TCF4-242ENST00000569012 FBXO41Q8TF61 875 aa10.26□□□□□ -0.77
TCF4-242ENST00000569012 RICTORQ6R327 1708 aa10.26□□□□□ -0.77
TCF4-242ENST00000569012 FANCAO15360 1455 aa10.25□□□□□ -0.77
TCF4-242ENST00000569012 ARID4BQ4LE39 1312 aaPredicted RBP10.25□□□□□ -0.77
TCF4-242ENST00000569012 VPS8Q8N3P4 1428 aa10.24□□□□□ -0.77
TCF4-242ENST00000569012 ARHGEF40Q8TER5 1519 aa10.24□□□□□ -0.77
TCF4-242ENST00000569012 CFAP74Q9C0B2 1584 aa10.24□□□□□ -0.77
TCF4-242ENST00000569012 MADDQ8WXG6 1647 aa10.24□□□□□ -0.77
TCF4-242ENST00000569012 FMN1Q68DA7 1419 aa10.24□□□□□ -0.77
TCF4-242ENST00000569012 MAGI2Q86UL8 1455 aa10.23□□□□□ -0.77
TCF4-242ENST00000569012 LMTK3Q96Q04 1460 aa10.23□□□□□ -0.77
TCF4-242ENST00000569012 ZMYM4Q5VZL5 1548 aa10.23□□□□□ -0.77
TCF4-242ENST00000569012 PCF11O94913 1555 aaKnown RBP10.22□□□□□ -0.77
TCF4-242ENST00000569012 AMER1Q5JTC6 1135 aaPredicted RBP10.22□□□□□ -0.77
TCF4-242ENST00000569012 ATP1B4Q9UN42 357 aaPredicted RBP10.22□□□□□ -0.77
TCF4-242ENST00000569012 PLCH2O75038 1416 aa10.22□□□□□ -0.77
TCF4-242ENST00000569012 TTC37Q6PGP7 1564 aa10.22□□□□□ -0.77
TCF4-242ENST00000569012 POGZQ7Z3K3 1410 aa10.2□□□□□ -0.78
TCF4-242ENST00000569012 YEATS2Q9ULM3 1422 aa10.2□□□□□ -0.78
TCF4-242ENST00000569012 SIGLEC1Q9BZZ2 1709 aa10.19□□□□□ -0.78
TCF4-242ENST00000569012 RIMS1Q86UR5 1692 aaKnown RBP10.19□□□□□ -0.78
TCF4-242ENST00000569012 CDK13Q14004 1512 aaKnown RBP10.19□□□□□ -0.78
TCF4-242ENST00000569012 ZFYVE16Q7Z3T8 1539 aa10.19□□□□□ -0.78
TCF4-242ENST00000569012 SCAPERQ9BY12 1400 aa10.19□□□□□ -0.78
TCF4-242ENST00000569012 HECW1Q76N89 1606 aa10.18□□□□□ -0.78
TCF4-242ENST00000569012 CASKIN1Q8WXD9 1431 aa10.18□□□□□ -0.78
TCF4-242ENST00000569012 DSG3P32926 999 aa10.18□□□□□ -0.78
TCF4-242ENST00000569012 EFCAB2Q5VUJ9 269 aa10.17□□□□□ -0.78
TCF4-242ENST00000569012 RTN4Q9NQC3 1192 aaKnown RBP10.17□□□□□ -0.78
TCF4-242ENST00000569012 ATP10AO60312 1499 aa10.17□□□□□ -0.78
TCF4-242ENST00000569012 FYCO1Q9BQS8 1478 aa10.17□□□□□ -0.78
TCF4-242ENST00000569012 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
TCF4-242ENST00000569012 CDK11AQ9UQ88 783 aaPredicted RBP10.16□□□□□ -0.78
TCF4-242ENST00000569012 HSPA2P54652 639 aa10.15□□□□□ -0.78
TCF4-242ENST00000569012 ARHGEF12Q9NZN5 1544 aa10.14□□□□□ -0.79
TCF4-242ENST00000569012 C9orf84Q5VXU9 1444 aa10.13□□□□□ -0.79
TCF4-242ENST00000569012 MYO5CQ9NQX4 1742 aa10.13□□□□□ -0.79
TCF4-242ENST00000569012 ZNF518AQ6AHZ1 1483 aa10.12□□□□□ -0.79
TCF4-242ENST00000569012 MLECQ14165 292 aa10.12□□□□□ -0.79
TCF4-242ENST00000569012 TROQ12816 1431 aaPredicted RBP10.12□□□□□ -0.79
TCF4-242ENST00000569012 KDM5CP41229 1560 aa10.12□□□□□ -0.79
TCF4-242ENST00000569012 FER1L4A9Z1Z3 1794 aa10.11□□□□□ -0.79
TCF4-242ENST00000569012 CCDC18Q5T9S5 1454 aa10.11□□□□□ -0.79
TCF4-242ENST00000569012 PPARGC1BQ86YN6 1023 aaKnown RBP10.11□□□□□ -0.79
TCF4-242ENST00000569012 PROM2Q8N271 834 aa10.11□□□□□ -0.79
TCF4-242ENST00000569012 AFAP1Q8N556 730 aa10.11□□□□□ -0.79
TCF4-242ENST00000569012 KIF14Q15058 1648 aa10.11□□□□□ -0.79
TCF4-242ENST00000569012 CERKQ8TCT0 537 aa10.1□□□□□ -0.79
TCF4-242ENST00000569012 CEBPAP49715 358 aaPredicted RBP10.09□□□□□ -0.79
TCF4-242ENST00000569012 MLH3Q9UHC1 1453 aa10.09□□□□□ -0.79
TCF4-242ENST00000569012 TIAM1Q13009 1591 aa10.09□□□□□ -0.79
TCF4-242ENST00000569012 REREQ9P2R6 1566 aa10.09□□□□□ -0.79
TCF4-242ENST00000569012 ARHGAP5Q13017 1502 aa10.08□□□□□ -0.8
TCF4-242ENST00000569012 MAP3K1Q13233 1512 aa10.08□□□□□ -0.8
TCF4-242ENST00000569012 LRRIQ1Q96JM4 1722 aa10.08□□□□□ -0.8
TCF4-242ENST00000569012 KANK4Q5T7N3 995 aaPredicted RBP10.08□□□□□ -0.8
TCF4-242ENST00000569012 PREX1Q8TCU6 1659 aa10.08□□□□□ -0.8
TCF4-242ENST00000569012 CDC42BPBQ9Y5S2 1711 aa10.07□□□□□ -0.8
TCF4-242ENST00000569012 MTUS2Q5JR59 1369 aa10.07□□□□□ -0.8
TCF4-242ENST00000569012 AGLP35573 1532 aa10.07□□□□□ -0.8
TCF4-242ENST00000569012 DIP2CQ9Y2E4 1556 aa10.06□□□□□ -0.8
TCF4-242ENST00000569012 SETD1BQ9UPS6 1966 aaKnown RBP10.06□□□□□ -0.8
TCF4-242ENST00000569012 LRRC9Q6ZRR7 1453 aa10.05□□□□□ -0.8
TCF4-242ENST00000569012 STRCQ7RTU9 1775 aa10.05□□□□□ -0.8
TCF4-242ENST00000569012 TRAPPC8Q9Y2L5 1435 aa10.05□□□□□ -0.8
TCF4-242ENST00000569012 PREX2Q70Z35 1606 aa10.04□□□□□ -0.8
TCF4-242ENST00000569012 UHRF1BP1Q6BDS2 1440 aa10.04□□□□□ -0.8
TCF4-242ENST00000569012 ABCA6Q8N139 1617 aa10.04□□□□□ -0.8
TCF4-242ENST00000569012 ABCC1P33527 1531 aa10.03□□□□□ -0.8
TCF4-242ENST00000569012 EHBP1L1Q8N3D4 1523 aa10.03□□□□□ -0.8
TCF4-242ENST00000569012 PTPRTO14522 1441 aa10.02□□□□□ -0.81
TCF4-242ENST00000569012 MYT1LQ9UL68 1186 aa10.02□□□□□ -0.81
TCF4-242ENST00000569012 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms