RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 PTPRKQ15262 1439 aa12.57□□□□□ -0.4
TCF4-241ENST00000568740 DHX57Q6P158 1386 aaKnown RBP12.57□□□□□ -0.4
TCF4-241ENST00000568740 CHD1O14646 1710 aa12.56□□□□□ -0.4
TCF4-241ENST00000568740 ERCC6L2Q5T890 1561 aa12.56□□□□□ -0.4
TCF4-241ENST00000568740 NEUROD1Q13562 356 aa12.56□□□□□ -0.4
TCF4-241ENST00000568740 PTPRGP23470 1445 aa12.56□□□□□ -0.4
TCF4-241ENST00000568740 KCNH8Q96L42 1107 aa12.55□□□□□ -0.4
TCF4-241ENST00000568740 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
TCF4-241ENST00000568740 SIN3AQ96ST3 1273 aa12.54□□□□□ -0.4
TCF4-241ENST00000568740 HECW1Q76N89 1606 aa12.53□□□□□ -0.4
TCF4-241ENST00000568740 MYOM3Q5VTT5 1437 aa12.53□□□□□ -0.4
TCF4-241ENST00000568740 CDK11AQ9UQ88 783 aaPredicted RBP12.53□□□□□ -0.4
TCF4-241ENST00000568740 PLEKHD1A6NEE1 506 aa12.52□□□□□ -0.4
TCF4-241ENST00000568740 CCDC18Q5T9S5 1454 aa12.51□□□□□ -0.41
TCF4-241ENST00000568740 SETD5Q9C0A6 1442 aa12.51□□□□□ -0.41
TCF4-241ENST00000568740 RAPGEF6Q8TEU7 1601 aa12.5□□□□□ -0.41
TCF4-241ENST00000568740 CFDP1Q9UEE9 299 aaPredicted RBP12.5□□□□□ -0.41
TCF4-241ENST00000568740 EHBP1L1Q8N3D4 1523 aa12.49□□□□□ -0.41
TCF4-241ENST00000568740 ATP10BO94823 1461 aa12.48□□□□□ -0.41
TCF4-241ENST00000568740 TRIM52Q96A61 297 aa12.48□□□□□ -0.41
TCF4-241ENST00000568740 SUPT6HQ7KZ85 1726 aaKnown RBP12.47□□□□□ -0.41
TCF4-241ENST00000568740 FOXD1Q16676 465 aa12.46□□□□□ -0.41
TCF4-241ENST00000568740 HNRNPMP52272 730 aaKnown RBP eCLIP12.44□□□□□ -0.427e-6■■■□□ 17
TCF4-241ENST00000568740 PTPN23Q9H3S7 1636 aa12.44□□□□□ -0.42
TCF4-241ENST00000568740 TROQ12816 1431 aaPredicted RBP12.43□□□□□ -0.42
TCF4-241ENST00000568740 KIF14Q15058 1648 aa12.43□□□□□ -0.42
TCF4-241ENST00000568740 PAXIP1Q6ZW49 1069 aaPredicted RBP12.43□□□□□ -0.42
TCF4-241ENST00000568740 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
TCF4-241ENST00000568740 ARHGEF11O15085 1522 aa12.41□□□□□ -0.42
TCF4-241ENST00000568740 UACAQ9BZF9 1416 aa12.41□□□□□ -0.42
TCF4-241ENST00000568740 NBR1Q14596 966 aa12.41□□□□□ -0.42
TCF4-241ENST00000568740 CFAP44Q96MT7 982 aa12.41□□□□□ -0.42
TCF4-241ENST00000568740 NAIPQ13075 1403 aa12.4□□□□□ -0.42
TCF4-241ENST00000568740 ABCA8O94911 1581 aa12.4□□□□□ -0.42
TCF4-241ENST00000568740 HIRIP3Q9BW71 556 aaPredicted RBP12.4□□□□□ -0.43
TCF4-241ENST00000568740 GPATCH8Q9UKJ3 1502 aaKnown RBP12.39□□□□□ -0.43
TCF4-241ENST00000568740 DIEXFQ68CQ4 756 aaKnown RBP12.38□□□□□ -0.43
TCF4-241ENST00000568740 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.37□□□□□ -0.43
TCF4-241ENST00000568740 ZNF316A6NFI3 1004 aaPredicted RBP12.37□□□□□ -0.43
TCF4-241ENST00000568740 TSHZ2Q9NRE2 1034 aa12.37□□□□□ -0.43
TCF4-241ENST00000568740 MAPKBP1O60336 1514 aa12.37□□□□□ -0.43
TCF4-241ENST00000568740 SCAF1Q9H7N4 1312 aaKnown RBP12.37□□□□□ -0.43
TCF4-241ENST00000568740 ABCC5O15440 1437 aa12.36□□□□□ -0.43
TCF4-241ENST00000568740 HFM1A2PYH4 1435 aa12.36□□□□□ -0.43
TCF4-241ENST00000568740 KDM6BO15054 1643 aa12.35□□□□□ -0.43
TCF4-241ENST00000568740 DAPK1P53355 1430 aa12.35□□□□□ -0.43
TCF4-241ENST00000568740 MIA2Q96PC5 1412 aa12.35□□□□□ -0.43
TCF4-241ENST00000568740 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
TCF4-241ENST00000568740 CAMSAP2Q08AD1 1489 aa12.33□□□□□ -0.44
TCF4-241ENST00000568740 TCOF1Q13428 1488 aaKnown RBP12.33□□□□□ -0.44
TCF4-241ENST00000568740 SHROOM2Q13796 1616 aa12.32□□□□□ -0.44
TCF4-241ENST00000568740 MPHOSPH9Q99550 1183 aa12.31□□□□□ -0.44
TCF4-241ENST00000568740 CYB5RLQ6IPT4 315 aa12.31□□□□□ -0.44
TCF4-241ENST00000568740 CLSPNQ9HAW4 1339 aa12.31□□□□□ -0.44
TCF4-241ENST00000568740 TSPY4P0CV99 314 aa12.3□□□□□ -0.44
TCF4-241ENST00000568740 TSPY10P0CW01 314 aa12.3□□□□□ -0.44
TCF4-241ENST00000568740 ABCC10Q5T3U5 1492 aa12.29□□□□□ -0.44
TCF4-241ENST00000568740 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.29□□□□□ -0.44
TCF4-241ENST00000568740 ABCC2Q92887 1545 aa12.28□□□□□ -0.44
TCF4-241ENST00000568740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.28□□□□□ -0.44
TCF4-241ENST00000568740 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
TCF4-241ENST00000568740 AFAP1Q8N556 730 aa12.26□□□□□ -0.45
TCF4-241ENST00000568740 NCOA1Q15788 1441 aa12.25□□□□□ -0.45
TCF4-241ENST00000568740 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
TCF4-241ENST00000568740 TTC37Q6PGP7 1564 aa12.24□□□□□ -0.45
TCF4-241ENST00000568740 AKNAQ7Z591 1439 aa12.24□□□□□ -0.45
TCF4-241ENST00000568740 PKD2Q13563 968 aa12.24□□□□□ -0.45
TCF4-241ENST00000568740 DENND4BO75064 1496 aaPredicted RBP12.24□□□□□ -0.45
TCF4-241ENST00000568740 CDC42BPAQ5VT25 1732 aa12.24□□□□□ -0.45
TCF4-241ENST00000568740 ARHGAP5Q13017 1502 aa12.24□□□□□ -0.45
TCF4-241ENST00000568740 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.24□□□□□ -0.45
TCF4-241ENST00000568740 TONSLQ96HA7 1378 aa12.23□□□□□ -0.45
TCF4-241ENST00000568740 MIER1Q8N108 512 aa12.23□□□□□ -0.45
TCF4-241ENST00000568740 PPP1R15AO75807 674 aaPredicted RBP12.23□□□□□ -0.45
TCF4-241ENST00000568740 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
TCF4-241ENST00000568740 C9orf84Q5VXU9 1444 aa12.22□□□□□ -0.45
TCF4-241ENST00000568740 ZCCHC11Q5TAX3 1644 aaKnown RBP12.21□□□□□ -0.45
TCF4-241ENST00000568740 ZNF326Q5BKZ1 582 aaKnown RBP12.21□□□□□ -0.45
TCF4-241ENST00000568740 YTHDC1Q96MU7 727 aaKnown RBP12.21□□□□□ -0.45
TCF4-241ENST00000568740 ANKRD30AQ9BXX3 1397 aa12.21□□□□□ -0.45
TCF4-241ENST00000568740 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.46
TCF4-241ENST00000568740 ADCY10Q96PN6 1610 aa12.2□□□□□ -0.46
TCF4-241ENST00000568740 EFCAB2Q5VUJ9 269 aa12.2□□□□□ -0.46
TCF4-241ENST00000568740 MBD5Q9P267 1494 aa12.2□□□□□ -0.46
TCF4-241ENST00000568740 NUP155O75694 1391 aa12.2□□□□□ -0.46
TCF4-241ENST00000568740 KIF15Q9NS87 1388 aa12.2□□□□□ -0.46
TCF4-241ENST00000568740 L3MBTL2Q969R5 705 aa12.2□□□□□ -0.46
TCF4-241ENST00000568740 KDM5BQ9UGL1 1544 aa12.19□□□□□ -0.46
TCF4-241ENST00000568740 ANKRD50Q9ULJ7 1429 aa12.19□□□□□ -0.46
TCF4-241ENST00000568740 ROCK1Q13464 1354 aa12.19□□□□□ -0.46
TCF4-241ENST00000568740 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
TCF4-241ENST00000568740 SAMD9LQ8IVG5 1584 aa12.19□□□□□ -0.46
TCF4-241ENST00000568740 ARHGEF12Q9NZN5 1544 aa12.18□□□□□ -0.46
TCF4-241ENST00000568740 ITSN2Q9NZM3 1697 aa12.18□□□□□ -0.46
TCF4-241ENST00000568740 CDC42BPBQ9Y5S2 1711 aa12.18□□□□□ -0.46
TCF4-241ENST00000568740 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
TCF4-241ENST00000568740 TRAPPC8Q9Y2L5 1435 aa12.16□□□□□ -0.46
TCF4-241ENST00000568740 DDX10Q13206 875 aaKnown RBP12.16□□□□□ -0.46
TCF4-241ENST00000568740 IGSF3O75054 1194 aa12.15□□□□□ -0.46
TCF4-241ENST00000568740 PLCH2O75038 1416 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms