RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SIGLEC1Q9BZZ2 1709 aa19.76■□□□□ 0.75
GTF3C1-209ENST00000568569 CERKQ8TCT0 537 aa19.74■□□□□ 0.75
GTF3C1-209ENST00000568569 ATP10AO60312 1499 aa19.73■□□□□ 0.75
GTF3C1-209ENST00000568569 C9orf84Q5VXU9 1444 aa19.72■□□□□ 0.75
GTF3C1-209ENST00000568569 ARHGEF12Q9NZN5 1544 aa19.71■□□□□ 0.75
GTF3C1-209ENST00000568569 EFCAB2Q5VUJ9 269 aa19.71■□□□□ 0.75
GTF3C1-209ENST00000568569 FER1L4A9Z1Z3 1794 aa19.7■□□□□ 0.74
GTF3C1-209ENST00000568569 CDK11AQ9UQ88 783 aaPredicted RBP19.69■□□□□ 0.74
GTF3C1-209ENST00000568569 FMN1Q68DA7 1419 aa19.68■□□□□ 0.74
GTF3C1-209ENST00000568569 ATP1B4Q9UN42 357 aaPredicted RBP19.68■□□□□ 0.74
GTF3C1-209ENST00000568569 ZNF518AQ6AHZ1 1483 aa19.66■□□□□ 0.74
GTF3C1-209ENST00000568569 CEBPAP49715 358 aaPredicted RBP19.63■□□□□ 0.73
GTF3C1-209ENST00000568569 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
GTF3C1-209ENST00000568569 DMRT2Q9Y5R5 561 aa19.62■□□□□ 0.73
GTF3C1-209ENST00000568569 MYO5CQ9NQX4 1742 aa19.62■□□□□ 0.73
GTF3C1-209ENST00000568569 PREX1Q8TCU6 1659 aa19.62■□□□□ 0.73
GTF3C1-209ENST00000568569 KIF14Q15058 1648 aa19.62■□□□□ 0.73
GTF3C1-209ENST00000568569 TROQ12816 1431 aaPredicted RBP19.61■□□□□ 0.73
GTF3C1-209ENST00000568569 UHRF1BP1Q6BDS2 1440 aa19.61■□□□□ 0.73
GTF3C1-209ENST00000568569 AFAP1Q8N556 730 aa19.61■□□□□ 0.73
GTF3C1-209ENST00000568569 ARHGAP5Q13017 1502 aa19.61■□□□□ 0.73
GTF3C1-209ENST00000568569 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
GTF3C1-209ENST00000568569 CLIP1P30622 1438 aa19.6■□□□□ 0.73
GTF3C1-209ENST00000568569 KDM5CP41229 1560 aa19.6■□□□□ 0.73
GTF3C1-209ENST00000568569 MYT1LQ9UL68 1186 aa19.59■□□□□ 0.73
GTF3C1-209ENST00000568569 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
GTF3C1-209ENST00000568569 REREQ9P2R6 1566 aa19.55■□□□□ 0.72
GTF3C1-209ENST00000568569 DIP2CQ9Y2E4 1556 aa19.54■□□□□ 0.72
GTF3C1-209ENST00000568569 MLH3Q9UHC1 1453 aa19.54■□□□□ 0.72
GTF3C1-209ENST00000568569 ESF1Q9H501 851 aaKnown RBP19.51■□□□□ 0.71
GTF3C1-209ENST00000568569 SETD1BQ9UPS6 1966 aaKnown RBP19.5■□□□□ 0.71
GTF3C1-209ENST00000568569 STRCQ7RTU9 1775 aa19.5■□□□□ 0.71
GTF3C1-209ENST00000568569 DISP3Q9P2K9 1392 aa19.5■□□□□ 0.71
GTF3C1-209ENST00000568569 AGLP35573 1532 aa19.5■□□□□ 0.71
GTF3C1-209ENST00000568569 PTPRTO14522 1441 aa19.5■□□□□ 0.71
GTF3C1-209ENST00000568569 ABCA6Q8N139 1617 aa19.49■□□□□ 0.71
GTF3C1-209ENST00000568569 TRAPPC8Q9Y2L5 1435 aa19.48■□□□□ 0.71
GTF3C1-209ENST00000568569 ABCC1P33527 1531 aa19.47■□□□□ 0.71
GTF3C1-209ENST00000568569 CNTLNQ9NXG0 1405 aa19.46■□□□□ 0.71
GTF3C1-209ENST00000568569 CCDC18Q5T9S5 1454 aa19.45■□□□□ 0.7
GTF3C1-209ENST00000568569 PREX2Q70Z35 1606 aa19.44■□□□□ 0.7
GTF3C1-209ENST00000568569 C3P01024 1663 aa19.44■□□□□ 0.7
GTF3C1-209ENST00000568569 CDC42BPBQ9Y5S2 1711 aa19.44■□□□□ 0.7
GTF3C1-209ENST00000568569 ILDR2Q71H61 639 aa19.43■□□□□ 0.7
GTF3C1-209ENST00000568569 CASKIN1Q8WXD9 1431 aa19.42■□□□□ 0.7
GTF3C1-209ENST00000568569 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
GTF3C1-209ENST00000568569 LRRIQ1Q96JM4 1722 aa19.41■□□□□ 0.7
GTF3C1-209ENST00000568569 SOCS7O14512 581 aa19.4■□□□□ 0.7
GTF3C1-209ENST00000568569 NPATQ14207 1427 aa19.39■□□□□ 0.69
GTF3C1-209ENST00000568569 LTBP4Q8N2S1 1624 aa19.39■□□□□ 0.69
GTF3C1-209ENST00000568569 ITSN2Q9NZM3 1697 aa19.39■□□□□ 0.69
GTF3C1-209ENST00000568569 IQSEC2Q5JU85 1478 aa19.38■□□□□ 0.69
GTF3C1-209ENST00000568569 KIDINS220Q9ULH0 1771 aa19.37■□□□□ 0.69
GTF3C1-209ENST00000568569 SAMD9LQ8IVG5 1584 aa19.35■□□□□ 0.69
GTF3C1-209ENST00000568569 ZMYM3Q14202 1370 aa19.34■□□□□ 0.69
GTF3C1-209ENST00000568569 SPAG9O60271 1321 aaKnown RBP19.34■□□□□ 0.69
GTF3C1-209ENST00000568569 ZNF777Q9ULD5 760 aaPredicted RBP19.34■□□□□ 0.69
GTF3C1-209ENST00000568569 SPATA31D1Q6ZQQ2 1576 aa19.34■□□□□ 0.69
GTF3C1-209ENST00000568569 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
GTF3C1-209ENST00000568569 FYCO1Q9BQS8 1478 aa19.33■□□□□ 0.68
GTF3C1-209ENST00000568569 CAMSAP1Q5T5Y3 1602 aa19.32■□□□□ 0.68
GTF3C1-209ENST00000568569 CDC42BPAQ5VT25 1732 aa19.31■□□□□ 0.68
GTF3C1-209ENST00000568569 SYCP2Q9BX26 1530 aa19.31■□□□□ 0.68
GTF3C1-209ENST00000568569 GPATCH8Q9UKJ3 1502 aaKnown RBP19.3■□□□□ 0.68
GTF3C1-209ENST00000568569 MROH2AA6NES4 1674 aa19.3■□□□□ 0.68
GTF3C1-209ENST00000568569 KIAA1107Q9UPP5 1409 aa19.29■□□□□ 0.68
GTF3C1-209ENST00000568569 HNRNPMP52272 730 aaKnown RBP eCLIP19.29■□□□□ 0.68
GTF3C1-209ENST00000568569 PLEKHH2Q8IVE3 1493 aa19.28■□□□□ 0.68
GTF3C1-209ENST00000568569 PLA2R1Q13018 1463 aa19.27■□□□□ 0.67
GTF3C1-209ENST00000568569 NCKAP5LQ9HCH0 1330 aa19.26■□□□□ 0.67
GTF3C1-209ENST00000568569 ATP7AQ04656 1500 aa19.26■□□□□ 0.67
GTF3C1-209ENST00000568569 PKD2Q13563 968 aa19.26■□□□□ 0.67
GTF3C1-209ENST00000568569 CFDP1Q9UEE9 299 aaPredicted RBP19.26■□□□□ 0.67
GTF3C1-209ENST00000568569 A2MP01023 1474 aa19.26■□□□□ 0.67
GTF3C1-209ENST00000568569 PLXNC1O60486 1568 aa19.26■□□□□ 0.67
GTF3C1-209ENST00000568569 ZNF335Q9H4Z2 1342 aaPredicted RBP19.25■□□□□ 0.67
GTF3C1-209ENST00000568569 PTPRKQ15262 1439 aa19.24■□□□□ 0.67
GTF3C1-209ENST00000568569 INO80Q9ULG1 1556 aaPredicted RBP19.23■□□□□ 0.67
GTF3C1-209ENST00000568569 SUPT6HQ7KZ85 1726 aaKnown RBP19.22■□□□□ 0.67
GTF3C1-209ENST00000568569 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
GTF3C1-209ENST00000568569 UBAP1LF5GYI3 381 aa19.22■□□□□ 0.67
GTF3C1-209ENST00000568569 GGT6Q6P531 493 aa19.22■□□□□ 0.67
GTF3C1-209ENST00000568569 PPP6R1Q9UPN7 881 aa19.22■□□□□ 0.67
GTF3C1-209ENST00000568569 CEP170BQ9Y4F5 1589 aaPredicted RBP19.22■□□□□ 0.67
GTF3C1-209ENST00000568569 TCOF1Q13428 1488 aaKnown RBP19.22■□□□□ 0.67
GTF3C1-209ENST00000568569 MYO3AQ8NEV4 1616 aa19.22■□□□□ 0.67
GTF3C1-209ENST00000568569 ZNF142P52746 1687 aaPredicted RBP19.2■□□□□ 0.66
GTF3C1-209ENST00000568569 CLTCQ00610 1675 aaKnown RBP19.2■□□□□ 0.66
GTF3C1-209ENST00000568569 MTUS2Q5JR59 1369 aa19.18■□□□□ 0.66
GTF3C1-209ENST00000568569 A2ML1A8K2U0 1454 aa19.14■□□□□ 0.65
GTF3C1-209ENST00000568569 ZNF644Q9H582 1327 aaPredicted RBP19.12■□□□□ 0.65
GTF3C1-209ENST00000568569 ADGBQ8N7X0 1667 aa19.11■□□□□ 0.65
GTF3C1-209ENST00000568569 MBD5Q9P267 1494 aa19.11■□□□□ 0.65
GTF3C1-209ENST00000568569 RTEL1-TNFRSF6BF6WH68 1400 aa19.11■□□□□ 0.65
GTF3C1-209ENST00000568569 DHX29Q7Z478 1369 aaKnown RBP19.1■□□□□ 0.65
GTF3C1-209ENST00000568569 TNRQ92752 1358 aa19.08■□□□□ 0.65
GTF3C1-209ENST00000568569 DNMT1P26358 1616 aaKnown RBP19.08■□□□□ 0.65
GTF3C1-209ENST00000568569 TIAM1Q13009 1591 aa19.08■□□□□ 0.65
GTF3C1-209ENST00000568569 EHBP1L1Q8N3D4 1523 aa19.07■□□□□ 0.64
GTF3C1-209ENST00000568569 CEP162Q5TB80 1403 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms