RNA–Protein interactions for RNA: ENST00000568562.1

ATP6V0C-204, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

TSL 3 BASIC

Gene ATP6V0C, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-204ENST00000568562 SCAPERQ9BY12 1400 aa31.09■■■□□ 2.57
ATP6V0C-204ENST00000568562 HSPA2P54652 639 aa31.08■■■□□ 2.57
ATP6V0C-204ENST00000568562 EHMT2Q96KQ7 1210 aa31.08■■■□□ 2.57
ATP6V0C-204ENST00000568562 MLECQ14165 292 aa31.07■■■□□ 2.56
ATP6V0C-204ENST00000568562 KIF14Q15058 1648 aa31.05■■■□□ 2.56
ATP6V0C-204ENST00000568562 ATP1B4Q9UN42 357 aaPredicted RBP31.04■■■□□ 2.56
ATP6V0C-204ENST00000568562 FMN1Q68DA7 1419 aa31.02■■■□□ 2.56
ATP6V0C-204ENST00000568562 ARHGAP35Q9NRY4 1499 aa31.01■■■□□ 2.56
ATP6V0C-204ENST00000568562 UBTFP17480 764 aaKnown RBP31■■■□□ 2.55
ATP6V0C-204ENST00000568562 ARHGEF12Q9NZN5 1544 aa30.98■■■□□ 2.55
ATP6V0C-204ENST00000568562 LRRIQ1Q96JM4 1722 aa30.98■■■□□ 2.55
ATP6V0C-204ENST00000568562 C9orf84Q5VXU9 1444 aa30.98■■■□□ 2.55
ATP6V0C-204ENST00000568562 ATP10AO60312 1499 aa30.97■■■□□ 2.55
ATP6V0C-204ENST00000568562 PREX1Q8TCU6 1659 aa30.94■■■□□ 2.54
ATP6V0C-204ENST00000568562 EFCAB2Q5VUJ9 269 aa30.94■■■□□ 2.54
ATP6V0C-204ENST00000568562 ARHGAP5Q13017 1502 aa30.93■■■□□ 2.54
ATP6V0C-204ENST00000568562 TROQ12816 1431 aaPredicted RBP30.9■■■□□ 2.54
ATP6V0C-204ENST00000568562 ZNF518AQ6AHZ1 1483 aa30.9■■■□□ 2.54
ATP6V0C-204ENST00000568562 CDK11AQ9UQ88 783 aaPredicted RBP30.9■■■□□ 2.54
ATP6V0C-204ENST00000568562 KDM5CP41229 1560 aa30.89■■■□□ 2.54
ATP6V0C-204ENST00000568562 CDC42BPBQ9Y5S2 1711 aa30.87■■■□□ 2.53
ATP6V0C-204ENST00000568562 CLIP1P30622 1438 aa30.86■■■□□ 2.53
ATP6V0C-204ENST00000568562 DIP2CQ9Y2E4 1556 aa30.84■■■□□ 2.53
ATP6V0C-204ENST00000568562 ABCA6Q8N139 1617 aa30.81■■■□□ 2.52
ATP6V0C-204ENST00000568562 CEBPAP49715 358 aaPredicted RBP30.81■■■□□ 2.52
ATP6V0C-204ENST00000568562 AFAP1Q8N556 730 aa30.81■■■□□ 2.52
ATP6V0C-204ENST00000568562 PREX2Q70Z35 1606 aa30.8■■■□□ 2.52
ATP6V0C-204ENST00000568562 MYT1LQ9UL68 1186 aa30.79■■■□□ 2.52
ATP6V0C-204ENST00000568562 CERKQ8TCT0 537 aa30.78■■■□□ 2.52
ATP6V0C-204ENST00000568562 REREQ9P2R6 1566 aa30.77■■■□□ 2.52
ATP6V0C-204ENST00000568562 ITSN2Q9NZM3 1697 aa30.77■■■□□ 2.52
ATP6V0C-204ENST00000568562 STRCQ7RTU9 1775 aa30.77■■■□□ 2.52
ATP6V0C-204ENST00000568562 ABCC1P33527 1531 aa30.74■■■□□ 2.51
ATP6V0C-204ENST00000568562 C3P01024 1663 aa30.74■■■□□ 2.51
ATP6V0C-204ENST00000568562 SETD1BQ9UPS6 1966 aaKnown RBP30.73■■■□□ 2.51
ATP6V0C-204ENST00000568562 CDC42BPAQ5VT25 1732 aa30.71■■■□□ 2.51
ATP6V0C-204ENST00000568562 UHRF1BP1Q6BDS2 1440 aa30.71■■■□□ 2.51
ATP6V0C-204ENST00000568562 MLH3Q9UHC1 1453 aa30.7■■■□□ 2.51
ATP6V0C-204ENST00000568562 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.51
ATP6V0C-204ENST00000568562 TRAPPC8Q9Y2L5 1435 aa30.69■■■□□ 2.5
ATP6V0C-204ENST00000568562 CCDC18Q5T9S5 1454 aa30.69■■■□□ 2.5
ATP6V0C-204ENST00000568562 KIDINS220Q9ULH0 1771 aa30.66■■■□□ 2.5
ATP6V0C-204ENST00000568562 CASKIN1Q8WXD9 1431 aa30.65■■■□□ 2.5
ATP6V0C-204ENST00000568562 AGLP35573 1532 aa30.64■■■□□ 2.5
ATP6V0C-204ENST00000568562 DMRT2Q9Y5R5 561 aa30.57■■■□□ 2.48
ATP6V0C-204ENST00000568562 SAMD9LQ8IVG5 1584 aa30.55■■■□□ 2.48
ATP6V0C-204ENST00000568562 ESF1Q9H501 851 aaKnown RBP30.55■■■□□ 2.48
ATP6V0C-204ENST00000568562 FYCO1Q9BQS8 1478 aa30.55■■■□□ 2.48
ATP6V0C-204ENST00000568562 SYCP2Q9BX26 1530 aa30.52■■■□□ 2.48
ATP6V0C-204ENST00000568562 SUPT6HQ7KZ85 1726 aaKnown RBP30.5■■■□□ 2.47
ATP6V0C-204ENST00000568562 MROH2AA6NES4 1674 aa30.49■■■□□ 2.47
ATP6V0C-204ENST00000568562 PTPRTO14522 1441 aa30.49■■■□□ 2.47
ATP6V0C-204ENST00000568562 CNTLNQ9NXG0 1405 aa30.49■■■□□ 2.47
ATP6V0C-204ENST00000568562 ZNF777Q9ULD5 760 aaPredicted RBP30.48■■■□□ 2.47
ATP6V0C-204ENST00000568562 GPATCH8Q9UKJ3 1502 aaKnown RBP30.44■■■□□ 2.46
ATP6V0C-204ENST00000568562 NCOA1Q15788 1441 aa30.42■■■□□ 2.46
ATP6V0C-204ENST00000568562 CLTCQ00610 1675 aaKnown RBP30.42■■■□□ 2.46
ATP6V0C-204ENST00000568562 ATP7AQ04656 1500 aa30.42■■■□□ 2.46
ATP6V0C-204ENST00000568562 INO80Q9ULG1 1556 aaPredicted RBP30.41■■■□□ 2.46
ATP6V0C-204ENST00000568562 LTBP4Q8N2S1 1624 aa30.4■■■□□ 2.46
ATP6V0C-204ENST00000568562 SPAG9O60271 1321 aaKnown RBP30.39■■■□□ 2.46
ATP6V0C-204ENST00000568562 CAMSAP1Q5T5Y3 1602 aa30.39■■■□□ 2.46
ATP6V0C-204ENST00000568562 PLXNC1O60486 1568 aa30.37■■■□□ 2.45
ATP6V0C-204ENST00000568562 HNRNPMP52272 730 aaKnown RBP eCLIP30.37■■■□□ 2.457e-8■■□□□ 12.1
ATP6V0C-204ENST00000568562 NPATQ14207 1427 aa30.37■■■□□ 2.45
ATP6V0C-204ENST00000568562 DISP3Q9P2K9 1392 aa30.36■■■□□ 2.45
ATP6V0C-204ENST00000568562 MYO3AQ8NEV4 1616 aa30.34■■■□□ 2.45
ATP6V0C-204ENST00000568562 ZMYM3Q14202 1370 aa30.34■■■□□ 2.45
ATP6V0C-204ENST00000568562 ZNF142P52746 1687 aaPredicted RBP30.33■■■□□ 2.45
ATP6V0C-204ENST00000568562 PLEKHH2Q8IVE3 1493 aa30.32■■■□□ 2.44
ATP6V0C-204ENST00000568562 A2MP01023 1474 aa30.31■■■□□ 2.44
ATP6V0C-204ENST00000568562 KIAA1107Q9UPP5 1409 aa30.31■■■□□ 2.44
ATP6V0C-204ENST00000568562 CFDP1Q9UEE9 299 aaPredicted RBP30.3■■■□□ 2.44
ATP6V0C-204ENST00000568562 CCNB3Q8WWL7 1395 aa30.29■■■□□ 2.44
ATP6V0C-204ENST00000568562 ADGBQ8N7X0 1667 aa30.29■■■□□ 2.44
ATP6V0C-204ENST00000568562 SPATA31D1Q6ZQQ2 1576 aa30.28■■■□□ 2.44
ATP6V0C-204ENST00000568562 IQSEC2Q5JU85 1478 aa30.28■■■□□ 2.44
ATP6V0C-204ENST00000568562 ILDR2Q71H61 639 aa30.26■■■□□ 2.43
ATP6V0C-204ENST00000568562 MTUS2Q5JR59 1369 aa30.26■■■□□ 2.43
ATP6V0C-204ENST00000568562 CEP170BQ9Y4F5 1589 aaPredicted RBP30.25■■■□□ 2.43
ATP6V0C-204ENST00000568562 TIAM1Q13009 1591 aa30.24■■■□□ 2.43
ATP6V0C-204ENST00000568562 NCKAP5LQ9HCH0 1330 aa30.23■■■□□ 2.43
ATP6V0C-204ENST00000568562 PTPRKQ15262 1439 aa30.22■■■□□ 2.43
ATP6V0C-204ENST00000568562 GGT6Q6P531 493 aa30.21■■■□□ 2.43
ATP6V0C-204ENST00000568562 EHBP1L1Q8N3D4 1523 aa30.19■■■□□ 2.42
ATP6V0C-204ENST00000568562 PLA2R1Q13018 1463 aa30.19■■■□□ 2.42
ATP6V0C-204ENST00000568562 ZNF335Q9H4Z2 1342 aaPredicted RBP30.16■■■□□ 2.42
ATP6V0C-204ENST00000568562 ZNF644Q9H582 1327 aaPredicted RBP30.16■■■□□ 2.42
ATP6V0C-204ENST00000568562 TCOF1Q13428 1488 aaKnown RBP30.14■■■□□ 2.42
ATP6V0C-204ENST00000568562 MBD5Q9P267 1494 aa30.13■■■□□ 2.41
ATP6V0C-204ENST00000568562 PKD2Q13563 968 aa30.1■■■□□ 2.41
ATP6V0C-204ENST00000568562 SOCS7O14512 581 aa30.09■■■□□ 2.41
ATP6V0C-204ENST00000568562 DNMT1P26358 1616 aaKnown RBP30.08■■■□□ 2.41
ATP6V0C-204ENST00000568562 POLR1AO95602 1720 aaPredicted RBP30.08■■■□□ 2.41
ATP6V0C-204ENST00000568562 CEP162Q5TB80 1403 aa30.07■■■□□ 2.4
ATP6V0C-204ENST00000568562 A2ML1A8K2U0 1454 aa30.06■■■□□ 2.4
ATP6V0C-204ENST00000568562 RTEL1-TNFRSF6BF6WH68 1400 aa30.06■■■□□ 2.4
ATP6V0C-204ENST00000568562 PPP6R1Q9UPN7 881 aa30.05■■■□□ 2.4
ATP6V0C-204ENST00000568562 UBAP1LF5GYI3 381 aa30.03■■■□□ 2.4
ATP6V0C-204ENST00000568562 DHX29Q7Z478 1369 aaKnown RBP30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms