RNA–Protein interactions for RNA: ENST00000568339.5

COX4I1-215, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 2

Gene COX4I1, Length 2,271 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-215ENST00000568339 ABCC2Q92887 1545 aa24.52■■□□□ 1.52
COX4I1-215ENST00000568339 CDC42BPAQ5VT25 1732 aa24.5■■□□□ 1.51
COX4I1-215ENST00000568339 DAPK1P53355 1430 aa24.5■■□□□ 1.51
COX4I1-215ENST00000568339 ROCK1Q13464 1354 aa24.48■■□□□ 1.51
COX4I1-215ENST00000568339 CAMSAP2Q08AD1 1489 aa24.47■■□□□ 1.51
COX4I1-215ENST00000568339 ABCC5O15440 1437 aa24.47■■□□□ 1.51
COX4I1-215ENST00000568339 UHRF1BP1LA0JNW5 1464 aa24.46■■□□□ 1.51
COX4I1-215ENST00000568339 CFDP1Q9UEE9 299 aaPredicted RBP24.42■■□□□ 1.5
COX4I1-215ENST00000568339 CROCC2H7BZ55 1655 aa24.42■■□□□ 1.5
COX4I1-215ENST00000568339 ZNF316A6NFI3 1004 aaPredicted RBP24.4■■□□□ 1.5
COX4I1-215ENST00000568339 ADGBQ8N7X0 1667 aa24.39■■□□□ 1.5
COX4I1-215ENST00000568339 ZNF644Q9H582 1327 aaPredicted RBP24.39■■□□□ 1.5
COX4I1-215ENST00000568339 PREX2Q70Z35 1606 aa24.36■■□□□ 1.49
COX4I1-215ENST00000568339 KDM5BQ9UGL1 1544 aa24.36■■□□□ 1.49
COX4I1-215ENST00000568339 ADGRL2O95490 1459 aa24.36■■□□□ 1.49
COX4I1-215ENST00000568339 KDM6BO15054 1643 aa24.35■■□□□ 1.49
COX4I1-215ENST00000568339 RRP7BPQ9NSQ0 103 aa24.35■■□□□ 1.49
COX4I1-215ENST00000568339 CHIC2Q9UKJ5 165 aa24.35■■□□□ 1.49
COX4I1-215ENST00000568339 TIMELESSQ9UNS1 1208 aa24.35■■□□□ 1.49
COX4I1-215ENST00000568339 ZCCHC11Q5TAX3 1644 aaKnown RBP24.34■■□□□ 1.49
COX4I1-215ENST00000568339 CDC42BPBQ9Y5S2 1711 aa24.33■■□□□ 1.49
COX4I1-215ENST00000568339 SHANK2Q9UPX8 1470 aa24.32■■□□□ 1.48
COX4I1-215ENST00000568339 ARHGEF5Q12774 1597 aa24.31■■□□□ 1.48
COX4I1-215ENST00000568339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.29■■□□□ 1.481e-6■□□□□ 10.3
COX4I1-215ENST00000568339 NCOA1Q15788 1441 aa24.28■■□□□ 1.48
COX4I1-215ENST00000568339 TTC37Q6PGP7 1564 aa24.27■■□□□ 1.48
COX4I1-215ENST00000568339 SAMD9LQ8IVG5 1584 aa24.25■■□□□ 1.47
COX4I1-215ENST00000568339 MYO5CQ9NQX4 1742 aa24.25■■□□□ 1.47
COX4I1-215ENST00000568339 DENND4BO75064 1496 aaPredicted RBP24.24■■□□□ 1.47
COX4I1-215ENST00000568339 SIN3AQ96ST3 1273 aa24.23■■□□□ 1.47
COX4I1-215ENST00000568339 ZNF777Q9ULD5 760 aaPredicted RBP24.23■■□□□ 1.47
COX4I1-215ENST00000568339 MBD5Q9P267 1494 aa24.22■■□□□ 1.47
COX4I1-215ENST00000568339 ANKRD30AQ9BXX3 1397 aa24.21■■□□□ 1.47
COX4I1-215ENST00000568339 OSCARQ8IYS5 282 aa24.21■■□□□ 1.47
COX4I1-215ENST00000568339 C9orf84Q5VXU9 1444 aa24.17■■□□□ 1.46
COX4I1-215ENST00000568339 RSPH4AQ5TD94 716 aa24.17■■□□□ 1.46
COX4I1-215ENST00000568339 CCDC141Q6ZP82 1450 aa24.16■■□□□ 1.46
COX4I1-215ENST00000568339 PLEKHH2Q8IVE3 1493 aa24.15■■□□□ 1.46
COX4I1-215ENST00000568339 ARHGAP5Q13017 1502 aa24.15■■□□□ 1.46
COX4I1-215ENST00000568339 MAST1Q9Y2H9 1570 aa24.15■■□□□ 1.46
COX4I1-215ENST00000568339 KIAA1107Q9UPP5 1409 aa24.14■■□□□ 1.45
COX4I1-215ENST00000568339 TRIM52Q96A61 297 aa24.14■■□□□ 1.45
COX4I1-215ENST00000568339 MPHOSPH9Q99550 1183 aa24.14■■□□□ 1.45
COX4I1-215ENST00000568339 ARAP3Q8WWN8 1544 aa24.13■■□□□ 1.45
COX4I1-215ENST00000568339 PLCH2O75038 1416 aa24.13■■□□□ 1.45
COX4I1-215ENST00000568339 ANKRD50Q9ULJ7 1429 aa24.09■■□□□ 1.45
COX4I1-215ENST00000568339 SYCP2Q9BX26 1530 aa24.09■■□□□ 1.45
COX4I1-215ENST00000568339 PPP1R15AO75807 674 aaPredicted RBP24.09■■□□□ 1.45
COX4I1-215ENST00000568339 TSPY4P0CV99 314 aa24.09■■□□□ 1.45
COX4I1-215ENST00000568339 TSPY10P0CW01 314 aa24.09■■□□□ 1.45
COX4I1-215ENST00000568339 WDR7Q9Y4E6 1490 aa24.09■■□□□ 1.45
COX4I1-215ENST00000568339 TONSLQ96HA7 1378 aa24.08■■□□□ 1.45
COX4I1-215ENST00000568339 PZPP20742 1482 aa24.08■■□□□ 1.44
COX4I1-215ENST00000568339 HNRNPMP52272 730 aaKnown RBP eCLIP24.07■■□□□ 1.441e-6■■■■□ 22.9
COX4I1-215ENST00000568339 KDM5DQ9BY66 1539 aa24.05■■□□□ 1.44
COX4I1-215ENST00000568339 KCNH8Q96L42 1107 aa24.04■■□□□ 1.44
COX4I1-215ENST00000568339 ABCA9Q8IUA7 1624 aa24.04■■□□□ 1.44
COX4I1-215ENST00000568339 PLXNC1O60486 1568 aa24.03■■□□□ 1.44
COX4I1-215ENST00000568339 ANKRD30BQ9BXX2 1392 aa24.03■■□□□ 1.44
COX4I1-215ENST00000568339 ABCC1P33527 1531 aa24.02■■□□□ 1.44
COX4I1-215ENST00000568339 KIF15Q9NS87 1388 aa24.01■■□□□ 1.43
COX4I1-215ENST00000568339 ARHGEF12Q9NZN5 1544 aa24■■□□□ 1.43
COX4I1-215ENST00000568339 EFCAB2Q5VUJ9 269 aa23.99■■□□□ 1.43
COX4I1-215ENST00000568339 YTHDC1Q96MU7 727 aaKnown RBP23.98■■□□□ 1.43
COX4I1-215ENST00000568339 SLC4A1APQ9BWU0 796 aaKnown RBP23.98■■□□□ 1.43
COX4I1-215ENST00000568339 RPRD2Q5VT52 1461 aaKnown RBP23.98■■□□□ 1.43
COX4I1-215ENST00000568339 MIER1Q8N108 512 aa23.96■■□□□ 1.43
COX4I1-215ENST00000568339 ASXL2Q76L83 1435 aa23.95■■□□□ 1.43
COX4I1-215ENST00000568339 UNC13BO14795 1591 aa23.91■■□□□ 1.42
COX4I1-215ENST00000568339 DUOX2Q9NRD8 1548 aa23.9■■□□□ 1.42
COX4I1-215ENST00000568339 FOXD1Q16676 465 aa23.89■■□□□ 1.42
COX4I1-215ENST00000568339 NUP155O75694 1391 aa23.88■■□□□ 1.41
COX4I1-215ENST00000568339 TEX14Q8IWB6 1497 aa23.87■■□□□ 1.41
COX4I1-215ENST00000568339 RTEL1-TNFRSF6BF6WH68 1400 aa23.87■■□□□ 1.41
COX4I1-215ENST00000568339 TRAPPC8Q9Y2L5 1435 aa23.86■■□□□ 1.41
COX4I1-215ENST00000568339 FANCAO15360 1455 aa23.85■■□□□ 1.41
COX4I1-215ENST00000568339 ERBINQ96RT1 1412 aa23.85■■□□□ 1.41
COX4I1-215ENST00000568339 NPM1P06748 294 aaKnown RBP eCLIP23.85■■□□□ 1.41
COX4I1-215ENST00000568339 FAM135AQ9P2D6 1515 aa23.83■■□□□ 1.4
COX4I1-215ENST00000568339 MAGI2Q86UL8 1455 aa23.83■■□□□ 1.4
COX4I1-215ENST00000568339 PKD2Q13563 968 aa23.82■■□□□ 1.4
COX4I1-215ENST00000568339 ZFYVE16Q7Z3T8 1539 aa23.82■■□□□ 1.4
COX4I1-215ENST00000568339 IQGAP3Q86VI3 1631 aa23.81■■□□□ 1.4
COX4I1-215ENST00000568339 L3MBTL2Q969R5 705 aa23.8■■□□□ 1.4
COX4I1-215ENST00000568339 INO80Q9ULG1 1556 aaPredicted RBP23.8■■□□□ 1.4
COX4I1-215ENST00000568339 CFAP74Q9C0B2 1584 aa23.78■■□□□ 1.4
COX4I1-215ENST00000568339 ADGRL1O94910 1474 aa23.76■■□□□ 1.39
COX4I1-215ENST00000568339 SPAG9O60271 1321 aaKnown RBP23.74■■□□□ 1.39
COX4I1-215ENST00000568339 ATP7AQ04656 1500 aa23.73■■□□□ 1.39
COX4I1-215ENST00000568339 SCAPERQ9BY12 1400 aa23.71■■□□□ 1.39
COX4I1-215ENST00000568339 DEPDC5O75140 1603 aa23.7■■□□□ 1.38
COX4I1-215ENST00000568339 AFAP1Q8N556 730 aa23.7■■□□□ 1.38
COX4I1-215ENST00000568339 CD109Q6YHK3 1445 aa23.69■■□□□ 1.38
COX4I1-215ENST00000568339 RIMBP3CA6NJZ7 1639 aa23.69■■□□□ 1.38
COX4I1-215ENST00000568339 RIMBP3BA6NNM3 1639 aa23.69■■□□□ 1.38
COX4I1-215ENST00000568339 RIMBP3Q9UFD9 1639 aa23.69■■□□□ 1.38
COX4I1-215ENST00000568339 EIF2AK4Q9P2K8 1649 aaKnown RBP23.67■■□□□ 1.38
COX4I1-215ENST00000568339 ATP10AO60312 1499 aa23.66■■□□□ 1.38
COX4I1-215ENST00000568339 ZNF518AQ6AHZ1 1483 aa23.65■■□□□ 1.38
COX4I1-215ENST00000568339 UHRF1BP1Q6BDS2 1440 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms