RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 BACH2Q9BYV9 841 aa14.19□□□□□ -0.14
PALB2-206ENST00000568219 CCDC18Q5T9S5 1454 aa14.18□□□□□ -0.14
PALB2-206ENST00000568219 TRIM44Q96DX7 344 aaPredicted RBP14.18□□□□□ -0.14
PALB2-206ENST00000568219 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
PALB2-206ENST00000568219 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
PALB2-206ENST00000568219 NBPF8Q3BBV2 869 aa14.17□□□□□ -0.14
PALB2-206ENST00000568219 CNTLNQ9NXG0 1405 aa14.17□□□□□ -0.14
PALB2-206ENST00000568219 FBLN2P98095 1184 aa14.17□□□□□ -0.14
PALB2-206ENST00000568219 FMN1Q68DA7 1419 aa14.17□□□□□ -0.14
PALB2-206ENST00000568219 RSPH6AQ9H0K4 717 aa14.15□□□□□ -0.14
PALB2-206ENST00000568219 MAPKBP1O60336 1514 aa14.15□□□□□ -0.14
PALB2-206ENST00000568219 ARID3AQ99856 593 aa14.15□□□□□ -0.14
PALB2-206ENST00000568219 ST20-MTHFSA0A0A6YYL1 179 aa14.14□□□□□ -0.15
PALB2-206ENST00000568219 PKD2Q13563 968 aa14.14□□□□□ -0.15
PALB2-206ENST00000568219 LRRC9Q6ZRR7 1453 aa14.13□□□□□ -0.15
PALB2-206ENST00000568219 ANP32BQ92688 251 aaKnown RBP14.12□□□□□ -0.15
PALB2-206ENST00000568219 MS4A1P11836 297 aa14.12□□□□□ -0.15
PALB2-206ENST00000568219 PNISRQ8TF01 805 aaKnown RBP14.1□□□□□ -0.15
PALB2-206ENST00000568219 HSP90AA2PQ14568 343 aaPredicted RBP14.09□□□□□ -0.15
PALB2-206ENST00000568219 FAM161AQ3B820 660 aa14.09□□□□□ -0.15
PALB2-206ENST00000568219 UACAQ9BZF9 1416 aa14.09□□□□□ -0.15
PALB2-206ENST00000568219 L1TD1Q5T7N2 865 aaKnown RBP14.08□□□□□ -0.15
PALB2-206ENST00000568219 CFDP1Q9UEE9 299 aaPredicted RBP14.08□□□□□ -0.16
PALB2-206ENST00000568219 NLRP13Q86W25 1043 aa14.07□□□□□ -0.16
PALB2-206ENST00000568219 IGF1RP08069 1367 aa14.07□□□□□ -0.16
PALB2-206ENST00000568219 KNSTRNQ9Y448 316 aa14.07□□□□□ -0.16
PALB2-206ENST00000568219 PRXQ9BXM0 1461 aa14.07□□□□□ -0.16
PALB2-206ENST00000568219 NCLP19338 710 aaKnown RBP14.07□□□□□ -0.16
PALB2-206ENST00000568219 TNNT2P45379 298 aaPredicted RBP14.07□□□□□ -0.16
PALB2-206ENST00000568219 RALBP1Q15311 655 aa14.07□□□□□ -0.16
PALB2-206ENST00000568219 CCDC146Q8IYE0 955 aa14.07□□□□□ -0.16
PALB2-206ENST00000568219 ZBTB7CA1YPR0 619 aa14.06□□□□□ -0.16
PALB2-206ENST00000568219 TSPY4P0CV99 314 aa14.06□□□□□ -0.16
PALB2-206ENST00000568219 TSPY10P0CW01 314 aa14.06□□□□□ -0.16
PALB2-206ENST00000568219 UBE2Q2Q8WVN8 375 aa14.06□□□□□ -0.16
PALB2-206ENST00000568219 GOLGA6L3A6NEY3 463 aa14.06□□□□□ -0.16
PALB2-206ENST00000568219 PKNOX2Q96KN3 472 aa14.05□□□□□ -0.16
PALB2-206ENST00000568219 SMG6Q86US8 1419 aaKnown RBP14.05□□□□□ -0.16
PALB2-206ENST00000568219 USP47Q96K76 1375 aa14.04□□□□□ -0.16
PALB2-206ENST00000568219 MYBBP1AQ9BQG0 1328 aaKnown RBP14.04□□□□□ -0.16
PALB2-206ENST00000568219 FGD6Q6ZV73 1430 aa14.04□□□□□ -0.16
PALB2-206ENST00000568219 KTN1Q86UP2 1357 aaKnown RBP14.04□□□□□ -0.16
PALB2-206ENST00000568219 POGKQ9P215 609 aa14.03□□□□□ -0.16
PALB2-206ENST00000568219 PDE3BQ13370 1112 aa14.03□□□□□ -0.16
PALB2-206ENST00000568219 C20orf194Q5TEA3 1177 aa14.02□□□□□ -0.16
PALB2-206ENST00000568219 CLUAP1Q96AJ1 413 aa14.02□□□□□ -0.16
PALB2-206ENST00000568219 SENP3Q9H4L4 574 aaPredicted RBP14.02□□□□□ -0.17
PALB2-206ENST00000568219 CENPQQ7L2Z9 268 aaPredicted RBP14.02□□□□□ -0.17
PALB2-206ENST00000568219 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
PALB2-206ENST00000568219 ZNF644Q9H582 1327 aaPredicted RBP14□□□□□ -0.17
PALB2-206ENST00000568219 TPRNQ4KMQ1 711 aa14□□□□□ -0.17
PALB2-206ENST00000568219 FOXD4L1Q9NU39 408 aa13.99□□□□□ -0.17
PALB2-206ENST00000568219 MYH16Q9H6N6 1097 aa13.99□□□□□ -0.17
PALB2-206ENST00000568219 GOLGA2Q08379 1002 aa13.98□□□□□ -0.17
PALB2-206ENST00000568219 KIF15Q9NS87 1388 aa13.98□□□□□ -0.17
PALB2-206ENST00000568219 MFAP1P55081 439 aaKnown RBP13.98□□□□□ -0.17
PALB2-206ENST00000568219 PANK3Q9H999 370 aa13.98□□□□□ -0.17
PALB2-206ENST00000568219 BCL2L13Q9BXK5 485 aa13.98□□□□□ -0.17
PALB2-206ENST00000568219 EIF4G1Q04637 1599 aaKnown RBP13.97□□□□□ -0.17
PALB2-206ENST00000568219 FAM43AQ8N2R8 423 aa13.97□□□□□ -0.17
PALB2-206ENST00000568219 COG6Q9Y2V7 657 aa13.97□□□□□ -0.17
PALB2-206ENST00000568219 ROCK2O75116 1388 aaKnown RBP13.95□□□□□ -0.18
PALB2-206ENST00000568219 TDRD9Q8NDG6 1382 aaKnown RBP13.94□□□□□ -0.18
PALB2-206ENST00000568219 FTSJ3Q8IY81 847 aaKnown RBP13.94□□□□□ -0.18
PALB2-206ENST00000568219 ADAMTS8Q9UP79 889 aa13.94□□□□□ -0.18
PALB2-206ENST00000568219 HSP90AB1P08238 724 aaKnown RBP13.93□□□□□ -0.18
PALB2-206ENST00000568219 CHGAP10645 457 aaKnown RBP13.93□□□□□ -0.18
PALB2-206ENST00000568219 TIAM1Q13009 1591 aa13.93□□□□□ -0.18
PALB2-206ENST00000568219 ERICH3Q5RHP9 1530 aa13.92□□□□□ -0.18
PALB2-206ENST00000568219 NUP155O75694 1391 aa13.92□□□□□ -0.18
PALB2-206ENST00000568219 NAIPQ13075 1403 aa13.92□□□□□ -0.18
PALB2-206ENST00000568219 TMF1P82094 1093 aa13.92□□□□□ -0.18
PALB2-206ENST00000568219 HSCBQ8IWL3 235 aa13.92□□□□□ -0.18
PALB2-206ENST00000568219 APAF1O14727 1248 aa13.91□□□□□ -0.18
PALB2-206ENST00000568219 RRP7AQ9Y3A4 280 aaKnown RBP13.91□□□□□ -0.18
PALB2-206ENST00000568219 HFM1A2PYH4 1435 aa13.91□□□□□ -0.18
PALB2-206ENST00000568219 WASHC2CQ9Y4E1 1318 aa13.9□□□□□ -0.18
PALB2-206ENST00000568219 AQRO60306 1485 aaKnown RBP eCLIP13.9□□□□□ -0.182e-7■□□□□ 8.7
PALB2-206ENST00000568219 DNTTIP2Q5QJE6 756 aaKnown RBP13.9□□□□□ -0.19
PALB2-206ENST00000568219 PANK1Q8TE04 598 aa13.9□□□□□ -0.19
PALB2-206ENST00000568219 BCAR3O75815 825 aa13.89□□□□□ -0.19
PALB2-206ENST00000568219 GOLGA6L22H0YM25 854 aa13.89□□□□□ -0.19
PALB2-206ENST00000568219 PTPRKQ15262 1439 aa13.88□□□□□ -0.19
PALB2-206ENST00000568219 MSNP26038 577 aaKnown RBP13.88□□□□□ -0.19
PALB2-206ENST00000568219 CFTRP13569 1480 aa13.88□□□□□ -0.19
PALB2-206ENST00000568219 ZMYND15Q9H091 742 aa13.88□□□□□ -0.19
PALB2-206ENST00000568219 NCOA1Q15788 1441 aa13.87□□□□□ -0.19
PALB2-206ENST00000568219 MYOM3Q5VTT5 1437 aa13.87□□□□□ -0.19
PALB2-206ENST00000568219 PTMAP06454 111 aaKnown RBP13.86□□□□□ -0.19
PALB2-206ENST00000568219 NCOA2Q15596 1464 aa13.85□□□□□ -0.19
PALB2-206ENST00000568219 BRD4O60885 1362 aaPredicted RBP13.85□□□□□ -0.19
PALB2-206ENST00000568219 FAM13BQ9NYF5 915 aa13.84□□□□□ -0.19
PALB2-206ENST00000568219 NBPF1Q3BBV0 1214 aa13.84□□□□□ -0.19
PALB2-206ENST00000568219 PLEKHD1A6NEE1 506 aa13.83□□□□□ -0.2
PALB2-206ENST00000568219 TRAK2O60296 914 aa13.83□□□□□ -0.2
PALB2-206ENST00000568219 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
PALB2-206ENST00000568219 PANK2Q9BZ23 570 aa13.83□□□□□ -0.2
PALB2-206ENST00000568219 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
PALB2-206ENST00000568219 CENPJQ9HC77 1338 aaPredicted RBP13.83□□□□□ -0.2
PALB2-206ENST00000568219 RRAGDQ9NQL2 400 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms