RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
CSPG4P13-202ENST00000567704 CASC1Q6TDU7 716 aa15.88■□□□□ 0.13
CSPG4P13-202ENST00000567704 HMGXB3Q12766 1538 aa15.87■□□□□ 0.13
CSPG4P13-202ENST00000567704 ZBTB7CA1YPR0 619 aa15.87■□□□□ 0.13
CSPG4P13-202ENST00000567704 ANO8Q9HCE9 1232 aaPredicted RBP15.87■□□□□ 0.13
CSPG4P13-202ENST00000567704 STAG3Q9UJ98 1225 aa15.87■□□□□ 0.13
CSPG4P13-202ENST00000567704 CFDP1Q9UEE9 299 aaPredicted RBP15.86■□□□□ 0.13
CSPG4P13-202ENST00000567704 DCAF11Q8TEB1 546 aa15.85■□□□□ 0.13
CSPG4P13-202ENST00000567704 SENP3Q9H4L4 574 aaPredicted RBP15.85■□□□□ 0.13
CSPG4P13-202ENST00000567704 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
CSPG4P13-202ENST00000567704 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.12
CSPG4P13-202ENST00000567704 GBP4Q96PP9 640 aa15.82■□□□□ 0.12
CSPG4P13-202ENST00000567704 MS4A1P11836 297 aa15.81■□□□□ 0.12
CSPG4P13-202ENST00000567704 CHAF1AQ13111 956 aaPredicted RBP15.81■□□□□ 0.12
CSPG4P13-202ENST00000567704 EXOC6Q8TAG9 804 aa15.79■□□□□ 0.12
CSPG4P13-202ENST00000567704 FHAD1B1AJZ9 1412 aa15.79■□□□□ 0.12
CSPG4P13-202ENST00000567704 MAPK8IP3Q9UPT6 1336 aa15.79■□□□□ 0.12
CSPG4P13-202ENST00000567704 TMF1P82094 1093 aa15.79■□□□□ 0.12
CSPG4P13-202ENST00000567704 KTN1Q86UP2 1357 aaKnown RBP15.79■□□□□ 0.12
CSPG4P13-202ENST00000567704 ZRSR1Q15695 479 aaKnown RBP15.78■□□□□ 0.12
CSPG4P13-202ENST00000567704 RALBP1Q15311 655 aa15.78■□□□□ 0.12
CSPG4P13-202ENST00000567704 L3MBTL2Q969R5 705 aa15.78■□□□□ 0.12
CSPG4P13-202ENST00000567704 FANCD2Q9BXW9 1451 aa15.77■□□□□ 0.12
CSPG4P13-202ENST00000567704 ZBED9Q6R2W3 1325 aa15.77■□□□□ 0.12
CSPG4P13-202ENST00000567704 PRKRIP1Q9H875 184 aaPredicted RBP15.77■□□□□ 0.11
CSPG4P13-202ENST00000567704 PLEKHD1A6NEE1 506 aa15.76■□□□□ 0.11
CSPG4P13-202ENST00000567704 IL27Q8NEV9 243 aa15.76■□□□□ 0.11
CSPG4P13-202ENST00000567704 MFAP1P55081 439 aaKnown RBP15.75■□□□□ 0.11
CSPG4P13-202ENST00000567704 MPHOSPH9Q99550 1183 aa15.75■□□□□ 0.11
CSPG4P13-202ENST00000567704 U2SURPO15042 1029 aaKnown RBP15.74■□□□□ 0.11
CSPG4P13-202ENST00000567704 PLIN1O60240 522 aa15.74■□□□□ 0.11
CSPG4P13-202ENST00000567704 PRKCSHP14314 528 aaPredicted RBP15.74■□□□□ 0.11
CSPG4P13-202ENST00000567704 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
CSPG4P13-202ENST00000567704 ARHGAP35Q9NRY4 1499 aa15.74■□□□□ 0.11
CSPG4P13-202ENST00000567704 PDE3BQ13370 1112 aa15.73■□□□□ 0.11
CSPG4P13-202ENST00000567704 RWDD1Q9H446 243 aaPredicted RBP15.73■□□□□ 0.11
CSPG4P13-202ENST00000567704 CHMP4BQ9H444 224 aaKnown RBP15.72■□□□□ 0.11
CSPG4P13-202ENST00000567704 FAM161AQ3B820 660 aa15.72■□□□□ 0.11
CSPG4P13-202ENST00000567704 RRP1P56182 461 aaKnown RBP15.71■□□□□ 0.11
CSPG4P13-202ENST00000567704 KIAA2012Q0VF49 1180 aa15.71■□□□□ 0.11
CSPG4P13-202ENST00000567704 PAK3O75914 559 aaPredicted RBP15.71■□□□□ 0.11
CSPG4P13-202ENST00000567704 PTMSP20962 102 aa15.7■□□□□ 0.1
CSPG4P13-202ENST00000567704 PKD2Q13563 968 aa15.7■□□□□ 0.1
CSPG4P13-202ENST00000567704 NLRP13Q86W25 1043 aa15.69■□□□□ 0.1
CSPG4P13-202ENST00000567704 CUX2O14529 1486 aa15.69■□□□□ 0.1
CSPG4P13-202ENST00000567704 GOLGA2Q08379 1002 aa15.69■□□□□ 0.1
CSPG4P13-202ENST00000567704 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
CSPG4P13-202ENST00000567704 CARMIL1Q5VZK9 1371 aa15.68■□□□□ 0.1
CSPG4P13-202ENST00000567704 PEG3Q9GZU2 1588 aa15.68■□□□□ 0.1
CSPG4P13-202ENST00000567704 BRPF3Q9ULD4 1205 aa15.68■□□□□ 0.1
CSPG4P13-202ENST00000567704 NFKBIBQ15653 356 aa15.68■□□□□ 0.1
CSPG4P13-202ENST00000567704 DRC7Q8IY82 874 aa15.68■□□□□ 0.1
CSPG4P13-202ENST00000567704 CRBNQ96SW2 442 aa15.67■□□□□ 0.1
CSPG4P13-202ENST00000567704 GOLGA6L4A6NEF3 574 aa15.67■□□□□ 0.1
CSPG4P13-202ENST00000567704 CENPQQ7L2Z9 268 aaPredicted RBP15.67■□□□□ 0.1
CSPG4P13-202ENST00000567704 PMFBP1Q8TBY8 1022 aa15.66■□□□□ 0.1
CSPG4P13-202ENST00000567704 CLUAP1Q96AJ1 413 aa15.66■□□□□ 0.1
CSPG4P13-202ENST00000567704 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
CSPG4P13-202ENST00000567704 CFTRP13569 1480 aa15.66■□□□□ 0.1
CSPG4P13-202ENST00000567704 ESF1Q9H501 851 aaKnown RBP15.66■□□□□ 0.1
CSPG4P13-202ENST00000567704 MORC1Q86VD1 984 aa15.64■□□□□ 0.09
CSPG4P13-202ENST00000567704 GOLGA6L6A8MZA4 724 aa15.64■□□□□ 0.09
CSPG4P13-202ENST00000567704 ITPRIPQ8IWB1 547 aa15.64■□□□□ 0.09
CSPG4P13-202ENST00000567704 APBB1O00213 710 aa15.64■□□□□ 0.09
CSPG4P13-202ENST00000567704 FMN1Q68DA7 1419 aa15.64■□□□□ 0.09
CSPG4P13-202ENST00000567704 NRDCO43847 1150 aa15.63■□□□□ 0.09
CSPG4P13-202ENST00000567704 MSH5O43196 834 aa15.62■□□□□ 0.09
CSPG4P13-202ENST00000567704 CCDC146Q8IYE0 955 aa15.62■□□□□ 0.09
CSPG4P13-202ENST00000567704 DDX11L8A8MPP1 907 aa15.61■□□□□ 0.09
CSPG4P13-202ENST00000567704 KCNJ4P48050 445 aa15.61■□□□□ 0.09
CSPG4P13-202ENST00000567704 MCCP23508 829 aa15.6■□□□□ 0.09
CSPG4P13-202ENST00000567704 ROCK2O75116 1388 aaKnown RBP15.6■□□□□ 0.09
CSPG4P13-202ENST00000567704 RUSC2Q8N2Y8 1516 aa15.6■□□□□ 0.09
CSPG4P13-202ENST00000567704 TAOK2Q9UL54 1235 aa15.59■□□□□ 0.09
CSPG4P13-202ENST00000567704 MYBBP1AQ9BQG0 1328 aaKnown RBP15.59■□□□□ 0.09
CSPG4P13-202ENST00000567704 IPO8O15397 1037 aaKnown RBP15.59■□□□□ 0.09
CSPG4P13-202ENST00000567704 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.09
CSPG4P13-202ENST00000567704 TDRD9Q8NDG6 1382 aaKnown RBP15.58■□□□□ 0.08
CSPG4P13-202ENST00000567704 NESP48681 1621 aa15.58■□□□□ 0.08
CSPG4P13-202ENST00000567704 CENPJQ9HC77 1338 aaPredicted RBP15.58■□□□□ 0.08
CSPG4P13-202ENST00000567704 FGD1P98174 961 aa15.58■□□□□ 0.08
CSPG4P13-202ENST00000567704 CFAP44Q96MT7 982 aa15.57■□□□□ 0.08
CSPG4P13-202ENST00000567704 DDX49Q9Y6V7 483 aaKnown RBP15.57■□□□□ 0.08
CSPG4P13-202ENST00000567704 SYAP1Q96A49 352 aaPredicted RBP15.57■□□□□ 0.08
CSPG4P13-202ENST00000567704 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
CSPG4P13-202ENST00000567704 FAM13BQ9NYF5 915 aa15.56■□□□□ 0.08
CSPG4P13-202ENST00000567704 KIF15Q9NS87 1388 aa15.56■□□□□ 0.08
CSPG4P13-202ENST00000567704 U2AF1L5P0DN76 240 aaPredicted RBP15.56■□□□□ 0.08
CSPG4P13-202ENST00000567704 U2AF1Q01081 240 aaKnown RBP eCLIP15.56■□□□□ 0.08
CSPG4P13-202ENST00000567704 NPM1P06748 294 aaKnown RBP eCLIP15.55■□□□□ 0.08
CSPG4P13-202ENST00000567704 OS9Q13438 667 aaPredicted RBP15.55■□□□□ 0.08
CSPG4P13-202ENST00000567704 ST20-MTHFSA0A0A6YYL1 179 aa15.54■□□□□ 0.08
CSPG4P13-202ENST00000567704 PKNOX2Q96KN3 472 aa15.54■□□□□ 0.08
CSPG4P13-202ENST00000567704 SMC4Q9NTJ3 1288 aa15.54■□□□□ 0.08
CSPG4P13-202ENST00000567704 PLEKHG5O94827 1062 aa15.54■□□□□ 0.08
CSPG4P13-202ENST00000567704 TNNT3P45378 269 aaPredicted RBP15.53■□□□□ 0.08
CSPG4P13-202ENST00000567704 NAP1L2Q9ULW6 460 aaPredicted RBP15.53■□□□□ 0.08
CSPG4P13-202ENST00000567704 FRAT2O75474 233 aaPredicted RBP15.52■□□□□ 0.08
CSPG4P13-202ENST00000567704 FOXD4L5Q5VV16 416 aaPredicted RBP15.52■□□□□ 0.08
CSPG4P13-202ENST00000567704 FAM43AQ8N2R8 423 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms