RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 DNMT1P26358 1616 aaKnown RBP33.91■■■■□ 3.02
LINC00543-201ENST00000567234 KDM5BQ9UGL1 1544 aa33.91■■■■□ 3.02
LINC00543-201ENST00000567234 PLEKHD1A6NEE1 506 aa33.9■■■■□ 3.02
LINC00543-201ENST00000567234 CENPBP07199 599 aaPredicted RBP33.89■■■■□ 3.02
LINC00543-201ENST00000567234 GPATCH8Q9UKJ3 1502 aaKnown RBP33.88■■■■□ 3.01
LINC00543-201ENST00000567234 DAPK1P53355 1430 aa33.85■■■■□ 3.01
LINC00543-201ENST00000567234 ROCK1Q13464 1354 aa33.84■■■■□ 3.01
LINC00543-201ENST00000567234 ABCC10Q5T3U5 1492 aa33.81■■■■□ 3
LINC00543-201ENST00000567234 DIEXFQ68CQ4 756 aaKnown RBP33.8■■■■□ 3
LINC00543-201ENST00000567234 CYB5RLQ6IPT4 315 aa33.8■■■■□ 3
LINC00543-201ENST00000567234 TIMELESSQ9UNS1 1208 aa33.8■■■■□ 3
LINC00543-201ENST00000567234 ABCC5O15440 1437 aa33.79■■■■□ 3
LINC00543-201ENST00000567234 CFDP1Q9UEE9 299 aaPredicted RBP33.79■■■■□ 3
LINC00543-201ENST00000567234 CAMSAP2Q08AD1 1489 aa33.78■■■■□ 3
LINC00543-201ENST00000567234 CDC42BPAQ5VT25 1732 aa33.78■■■■□ 3
LINC00543-201ENST00000567234 CHIC2Q9UKJ5 165 aa33.74■■■□□ 2.99
LINC00543-201ENST00000567234 RRP7BPQ9NSQ0 103 aa33.74■■■□□ 2.99
LINC00543-201ENST00000567234 ZNF644Q9H582 1327 aaPredicted RBP33.72■■■□□ 2.99
LINC00543-201ENST00000567234 CROCC2H7BZ55 1655 aa33.68■■■□□ 2.98
LINC00543-201ENST00000567234 ADGBQ8N7X0 1667 aa33.67■■■□□ 2.98
LINC00543-201ENST00000567234 NEUROD1Q13562 356 aa33.65■■■□□ 2.98
LINC00543-201ENST00000567234 KCNH8Q96L42 1107 aa33.65■■■□□ 2.98
LINC00543-201ENST00000567234 KDM6BO15054 1643 aa33.64■■■□□ 2.98
LINC00543-201ENST00000567234 SIN3AQ96ST3 1273 aa33.63■■■□□ 2.97
LINC00543-201ENST00000567234 ADGRL2O95490 1459 aa33.62■■■□□ 2.97
LINC00543-201ENST00000567234 TTC37Q6PGP7 1564 aa33.62■■■□□ 2.97
LINC00543-201ENST00000567234 ASXL2Q76L83 1435 aa33.61■■■□□ 2.97
LINC00543-201ENST00000567234 WDR7Q9Y4E6 1490 aa33.61■■■□□ 2.97
LINC00543-201ENST00000567234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.6■■■□□ 2.97
LINC00543-201ENST00000567234 NPM1P06748 294 aaKnown RBP eCLIP33.6■■■□□ 2.97
LINC00543-201ENST00000567234 PREX2Q70Z35 1606 aa33.57■■■□□ 2.97
LINC00543-201ENST00000567234 SHANK2Q9UPX8 1470 aa33.56■■■□□ 2.96
LINC00543-201ENST00000567234 NCOA1Q15788 1441 aa33.55■■■□□ 2.96
LINC00543-201ENST00000567234 ZNF777Q9ULD5 760 aaPredicted RBP33.54■■■□□ 2.96
LINC00543-201ENST00000567234 CDC42BPBQ9Y5S2 1711 aa33.53■■■□□ 2.96
LINC00543-201ENST00000567234 ARHGEF5Q12774 1597 aa33.52■■■□□ 2.96
LINC00543-201ENST00000567234 TRIM52Q96A61 297 aa33.49■■■□□ 2.95
LINC00543-201ENST00000567234 DENND4BO75064 1496 aaPredicted RBP33.49■■■□□ 2.95
LINC00543-201ENST00000567234 ANKRD30AQ9BXX3 1397 aa33.48■■■□□ 2.95
LINC00543-201ENST00000567234 MYO5CQ9NQX4 1742 aa33.47■■■□□ 2.95
LINC00543-201ENST00000567234 GTF3C3Q9Y5Q9 886 aa33.46■■■□□ 2.95
LINC00543-201ENST00000567234 MPHOSPH9Q99550 1183 aa33.44■■■□□ 2.94
LINC00543-201ENST00000567234 PPP1R15AO75807 674 aaPredicted RBP33.44■■■□□ 2.94
LINC00543-201ENST00000567234 SAMD9LQ8IVG5 1584 aa33.43■■■□□ 2.94
LINC00543-201ENST00000567234 TONSLQ96HA7 1378 aa33.43■■■□□ 2.94
LINC00543-201ENST00000567234 RSPH4AQ5TD94 716 aa33.41■■■□□ 2.94
LINC00543-201ENST00000567234 MBD5Q9P267 1494 aa33.41■■■□□ 2.94
LINC00543-201ENST00000567234 C9orf84Q5VXU9 1444 aa33.4■■■□□ 2.94
LINC00543-201ENST00000567234 ABCA9Q8IUA7 1624 aa33.39■■■□□ 2.94
LINC00543-201ENST00000567234 ARHGAP5Q13017 1502 aa33.36■■■□□ 2.93
LINC00543-201ENST00000567234 TSPY4P0CV99 314 aa33.35■■■□□ 2.93
LINC00543-201ENST00000567234 TSPY10P0CW01 314 aa33.35■■■□□ 2.93
LINC00543-201ENST00000567234 CCDC141Q6ZP82 1450 aa33.35■■■□□ 2.93
LINC00543-201ENST00000567234 PLEKHH2Q8IVE3 1493 aa33.33■■■□□ 2.93
LINC00543-201ENST00000567234 PLCH2O75038 1416 aa33.32■■■□□ 2.93
LINC00543-201ENST00000567234 ANKRD50Q9ULJ7 1429 aa33.31■■■□□ 2.92
LINC00543-201ENST00000567234 KIAA1107Q9UPP5 1409 aa33.3■■■□□ 2.92
LINC00543-201ENST00000567234 MAST1Q9Y2H9 1570 aa33.28■■■□□ 2.92
LINC00543-201ENST00000567234 HNRNPMP52272 730 aaKnown RBP eCLIP33.28■■■□□ 2.92
LINC00543-201ENST00000567234 PZPP20742 1482 aa33.27■■■□□ 2.92
LINC00543-201ENST00000567234 ANKRD30BQ9BXX2 1392 aa33.26■■■□□ 2.91
LINC00543-201ENST00000567234 DNAJC5Q9H3Z4 198 aa33.24■■■□□ 2.91
LINC00543-201ENST00000567234 SYCP2Q9BX26 1530 aa33.24■■■□□ 2.91
LINC00543-201ENST00000567234 SLC4A1APQ9BWU0 796 aaKnown RBP33.23■■■□□ 2.91
LINC00543-201ENST00000567234 ARAP3Q8WWN8 1544 aa33.22■■■□□ 2.91
LINC00543-201ENST00000567234 KDM5DQ9BY66 1539 aa33.19■■■□□ 2.9
LINC00543-201ENST00000567234 KIF15Q9NS87 1388 aa33.19■■■□□ 2.9
LINC00543-201ENST00000567234 RPRD2Q5VT52 1461 aaKnown RBP33.18■■■□□ 2.9
LINC00543-201ENST00000567234 DIP2BQ9P265 1576 aa33.18■■■□□ 2.9
LINC00543-201ENST00000567234 EFCAB2Q5VUJ9 269 aa33.18■■■□□ 2.9
LINC00543-201ENST00000567234 CD109Q6YHK3 1445 aa33.17■■■□□ 2.9
LINC00543-201ENST00000567234 FANCAO15360 1455 aa33.15■■■□□ 2.9
LINC00543-201ENST00000567234 ARHGEF12Q9NZN5 1544 aa33.15■■■□□ 2.9
LINC00543-201ENST00000567234 MIER1Q8N108 512 aa33.14■■■□□ 2.9
LINC00543-201ENST00000567234 PLXNC1O60486 1568 aa33.14■■■□□ 2.9
LINC00543-201ENST00000567234 MAP3K4Q9Y6R4 1608 aa33.14■■■□□ 2.9
LINC00543-201ENST00000567234 ABCC1P33527 1531 aa33.13■■■□□ 2.89
LINC00543-201ENST00000567234 GLI2P10070 1586 aa33.12■■■□□ 2.89
LINC00543-201ENST00000567234 FOXD1Q16676 465 aa33.11■■■□□ 2.89
LINC00543-201ENST00000567234 FAM69CQ0P6D2 419 aa33.09■■■□□ 2.89
LINC00543-201ENST00000567234 KIF13AQ9H1H9 1805 aa33.06■■■□□ 2.88
LINC00543-201ENST00000567234 NUP155O75694 1391 aa33.05■■■□□ 2.88
LINC00543-201ENST00000567234 TRAPPC8Q9Y2L5 1435 aa33.02■■■□□ 2.88
LINC00543-201ENST00000567234 TEX14Q8IWB6 1497 aa33.02■■■□□ 2.88
LINC00543-201ENST00000567234 TSPOAP1O95153 1857 aa33.02■■■□□ 2.88
LINC00543-201ENST00000567234 ADGRL1O94910 1474 aa33.01■■■□□ 2.87
LINC00543-201ENST00000567234 PKD2Q13563 968 aa33■■■□□ 2.87
LINC00543-201ENST00000567234 L3MBTL2Q969R5 705 aa33■■■□□ 2.87
LINC00543-201ENST00000567234 DUOX2Q9NRD8 1548 aa32.98■■■□□ 2.87
LINC00543-201ENST00000567234 UNC13BO14795 1591 aa32.98■■■□□ 2.87
LINC00543-201ENST00000567234 CFAP74Q9C0B2 1584 aa32.98■■■□□ 2.87
LINC00543-201ENST00000567234 SCAPERQ9BY12 1400 aa32.96■■■□□ 2.87
LINC00543-201ENST00000567234 PPRC1Q5VV67 1664 aaKnown RBP32.96■■■□□ 2.87
LINC00543-201ENST00000567234 AFAP1Q8N556 730 aa32.93■■■□□ 2.86
LINC00543-201ENST00000567234 ERBINQ96RT1 1412 aa32.92■■■□□ 2.86
LINC00543-201ENST00000567234 RTEL1-TNFRSF6BF6WH68 1400 aa32.92■■■□□ 2.86
LINC00543-201ENST00000567234 FAM135AQ9P2D6 1515 aa32.91■■■□□ 2.86
LINC00543-201ENST00000567234 NEO1Q92859 1461 aa32.89■■■□□ 2.86
LINC00543-201ENST00000567234 IQGAP3Q86VI3 1631 aa32.86■■■□□ 2.85
LINC00543-201ENST00000567234 MAGI2Q86UL8 1455 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms