RNA–Protein interactions for RNA: ENST00000566938.5

BBS4-212, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-212ENST00000566938 KDM6BO15054 1643 aa10.41□□□□□ -0.74
BBS4-212ENST00000566938 KDM4FA0A1W2PPD8 638 aa10.41□□□□□ -0.74
BBS4-212ENST00000566938 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
BBS4-212ENST00000566938 FARP1Q9Y4F1 1045 aaPredicted RBP10.41□□□□□ -0.74
BBS4-212ENST00000566938 TTBK1Q5TCY1 1321 aaPredicted RBP10.39□□□□□ -0.75
BBS4-212ENST00000566938 PRXQ9BXM0 1461 aa10.39□□□□□ -0.75
BBS4-212ENST00000566938 KIAA0556O60303 1618 aa10.39□□□□□ -0.75
BBS4-212ENST00000566938 EPRSP07814 1512 aaKnown RBP10.38□□□□□ -0.75
BBS4-212ENST00000566938 ZBTB47Q9UFB7 747 aaPredicted RBP10.38□□□□□ -0.75
BBS4-212ENST00000566938 PPRC1Q5VV67 1664 aaKnown RBP10.38□□□□□ -0.75
BBS4-212ENST00000566938 COL17A1Q9UMD9 1497 aaPredicted RBP10.36□□□□□ -0.75
BBS4-212ENST00000566938 HAX1O00165 279 aa10.36□□□□□ -0.75
BBS4-212ENST00000566938 KLHL34Q8N239 644 aa10.36□□□□□ -0.75
BBS4-212ENST00000566938 TSPOAP1O95153 1857 aa10.36□□□□□ -0.75
BBS4-212ENST00000566938 GOLGA3Q08378 1498 aa10.35□□□□□ -0.75
BBS4-212ENST00000566938 ZCCHC11Q5TAX3 1644 aaKnown RBP10.34□□□□□ -0.75
BBS4-212ENST00000566938 MAP3K4Q9Y6R4 1608 aa10.34□□□□□ -0.75
BBS4-212ENST00000566938 TEX14Q8IWB6 1497 aa10.33□□□□□ -0.76
BBS4-212ENST00000566938 WDR7Q9Y4E6 1490 aa10.33□□□□□ -0.76
BBS4-212ENST00000566938 ABCA8O94911 1581 aa10.33□□□□□ -0.76
BBS4-212ENST00000566938 CTTNBP2Q8WZ74 1663 aa10.31□□□□□ -0.76
BBS4-212ENST00000566938 MAGI3Q5TCQ9 1506 aa10.3□□□□□ -0.76
BBS4-212ENST00000566938 CD109Q6YHK3 1445 aa10.28□□□□□ -0.76
BBS4-212ENST00000566938 PAK3O75914 559 aaPredicted RBP10.28□□□□□ -0.76
BBS4-212ENST00000566938 MNX1P50219 401 aaPredicted RBP10.27□□□□□ -0.77
BBS4-212ENST00000566938 ADGRL1O94910 1474 aa10.26□□□□□ -0.77
BBS4-212ENST00000566938 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
BBS4-212ENST00000566938 ATP10BO94823 1461 aa10.25□□□□□ -0.77
BBS4-212ENST00000566938 CFAP43Q8NDM7 1665 aa10.25□□□□□ -0.77
BBS4-212ENST00000566938 KCNH8Q96L42 1107 aa10.24□□□□□ -0.77
BBS4-212ENST00000566938 C19orf67A6NJJ6 358 aa10.23□□□□□ -0.77
BBS4-212ENST00000566938 FAM9AQ8IZU1 332 aaPredicted RBP10.23□□□□□ -0.77
BBS4-212ENST00000566938 PHLDB1Q86UU1 1377 aa10.23□□□□□ -0.77
BBS4-212ENST00000566938 EEA1Q15075 1411 aa10.23□□□□□ -0.77
BBS4-212ENST00000566938 ARAP3Q8WWN8 1544 aa10.23□□□□□ -0.77
BBS4-212ENST00000566938 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
BBS4-212ENST00000566938 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
BBS4-212ENST00000566938 P3H3Q8IVL6 736 aa10.21□□□□□ -0.77
BBS4-212ENST00000566938 TSPYL2Q9H2G4 693 aaPredicted RBP10.2□□□□□ -0.78
BBS4-212ENST00000566938 SPOCK2Q92563 424 aa10.19□□□□□ -0.78
BBS4-212ENST00000566938 ZRANB1Q9UGI0 708 aa10.19□□□□□ -0.78
BBS4-212ENST00000566938 ABCA9Q8IUA7 1624 aa10.18□□□□□ -0.78
BBS4-212ENST00000566938 NUP153P49790 1475 aaKnown RBP10.17□□□□□ -0.78
BBS4-212ENST00000566938 FAM212AQ96EL1 285 aa10.17□□□□□ -0.78
BBS4-212ENST00000566938 NEO1Q92859 1461 aa10.17□□□□□ -0.78
BBS4-212ENST00000566938 RAPGEF6Q8TEU7 1601 aa10.16□□□□□ -0.78
BBS4-212ENST00000566938 ARID3CA6NKF2 412 aa10.16□□□□□ -0.78
BBS4-212ENST00000566938 DCAF8Q5TAQ9 597 aa10.15□□□□□ -0.78
BBS4-212ENST00000566938 NUBP1P53384 320 aa10.14□□□□□ -0.79
BBS4-212ENST00000566938 RASEFQ8IZ41 740 aa10.14□□□□□ -0.79
BBS4-212ENST00000566938 EVX2Q03828 476 aa10.13□□□□□ -0.79
BBS4-212ENST00000566938 FHOD3Q2V2M9 1422 aa10.13□□□□□ -0.79
BBS4-212ENST00000566938 PLEKHD1A6NEE1 506 aa10.12□□□□□ -0.79
BBS4-212ENST00000566938 RAPGEF3O95398 923 aa10.12□□□□□ -0.79
BBS4-212ENST00000566938 HECW2Q9P2P5 1572 aa10.12□□□□□ -0.79
BBS4-212ENST00000566938 EFCAB5A4FU69 1503 aa10.12□□□□□ -0.79
BBS4-212ENST00000566938 KIF21BO75037 1637 aa10.11□□□□□ -0.79
BBS4-212ENST00000566938 GSE1Q14687 1217 aa10.1□□□□□ -0.79
BBS4-212ENST00000566938 SP7Q8TDD2 431 aaPredicted RBP10.1□□□□□ -0.79
BBS4-212ENST00000566938 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
BBS4-212ENST00000566938 ILDR1Q86SU0 546 aaPredicted RBP10.09□□□□□ -0.79
BBS4-212ENST00000566938 FRMPD1Q5SYB0 1578 aa10.09□□□□□ -0.79
BBS4-212ENST00000566938 ADAMTSL3P82987 1691 aa10.08□□□□□ -0.8
BBS4-212ENST00000566938 AKNAQ7Z591 1439 aa10.07□□□□□ -0.8
BBS4-212ENST00000566938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.07□□□□□ -0.8
BBS4-212ENST00000566938 PTPRMP28827 1452 aa10.07□□□□□ -0.8
BBS4-212ENST00000566938 RANGAP1P46060 587 aaPredicted RBP10.07□□□□□ -0.8
BBS4-212ENST00000566938 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
BBS4-212ENST00000566938 FANCAO15360 1455 aa10.06□□□□□ -0.8
BBS4-212ENST00000566938 DENND4BO75064 1496 aaPredicted RBP10.06□□□□□ -0.8
BBS4-212ENST00000566938 PHF12Q96QT6 1004 aa10.05□□□□□ -0.8
BBS4-212ENST00000566938 ZMYM4Q5VZL5 1548 aa10.04□□□□□ -0.8
BBS4-212ENST00000566938 CLCN6P51797 869 aa10.04□□□□□ -0.8
BBS4-212ENST00000566938 PLCH2O75038 1416 aa10.04□□□□□ -0.8
BBS4-212ENST00000566938 FMN1Q68DA7 1419 aa10.04□□□□□ -0.8
BBS4-212ENST00000566938 MAGI2Q86UL8 1455 aa10.04□□□□□ -0.8
BBS4-212ENST00000566938 BCORL1Q5H9F3 1711 aa10.03□□□□□ -0.8
BBS4-212ENST00000566938 RICTORQ6R327 1708 aa10.03□□□□□ -0.8
BBS4-212ENST00000566938 CCDC61Q9Y6R9 512 aa10.03□□□□□ -0.8
BBS4-212ENST00000566938 ARHGAP35Q9NRY4 1499 aa10.03□□□□□ -0.8
BBS4-212ENST00000566938 ARHGEF40Q8TER5 1519 aa10.02□□□□□ -0.8
BBS4-212ENST00000566938 TTC37Q6PGP7 1564 aa10.02□□□□□ -0.81
BBS4-212ENST00000566938 CFAP74Q9C0B2 1584 aa10.02□□□□□ -0.81
BBS4-212ENST00000566938 CDK13Q14004 1512 aaKnown RBP10.02□□□□□ -0.81
BBS4-212ENST00000566938 UBTFP17480 764 aaKnown RBP10.01□□□□□ -0.81
BBS4-212ENST00000566938 CDK11AQ9UQ88 783 aaPredicted RBP10□□□□□ -0.81
BBS4-212ENST00000566938 ARID4BQ4LE39 1312 aaPredicted RBP10□□□□□ -0.81
BBS4-212ENST00000566938 POGZQ7Z3K3 1410 aa9.99□□□□□ -0.81
BBS4-212ENST00000566938 SCAPERQ9BY12 1400 aa9.99□□□□□ -0.81
BBS4-212ENST00000566938 YEATS2Q9ULM3 1422 aa9.99□□□□□ -0.81
BBS4-212ENST00000566938 GABBR2O75899 941 aa9.99□□□□□ -0.81
BBS4-212ENST00000566938 PYGBP11216 843 aa9.99□□□□□ -0.81
BBS4-212ENST00000566938 EFCAB2Q5VUJ9 269 aa9.99□□□□□ -0.81
BBS4-212ENST00000566938 MADDQ8WXG6 1647 aa9.99□□□□□ -0.81
BBS4-212ENST00000566938 LMTK3Q96Q04 1460 aa9.98□□□□□ -0.81
BBS4-212ENST00000566938 ZFYVE16Q7Z3T8 1539 aa9.98□□□□□ -0.81
BBS4-212ENST00000566938 HECW1Q76N89 1606 aa9.98□□□□□ -0.81
BBS4-212ENST00000566938 TROQ12816 1431 aaPredicted RBP9.98□□□□□ -0.81
BBS4-212ENST00000566938 PCF11O94913 1555 aaKnown RBP9.97□□□□□ -0.81
BBS4-212ENST00000566938 KIF12Q96FN5 646 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms