RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 KIF14Q15058 1648 aa27.11■■□□□ 1.93
EDC3-212ENST00000566828 SCAPERQ9BY12 1400 aa27.1■■□□□ 1.93
EDC3-212ENST00000566828 PLCH2O75038 1416 aa27.09■■□□□ 1.93
EDC3-212ENST00000566828 PREX1Q8TCU6 1659 aa27.09■■□□□ 1.93
EDC3-212ENST00000566828 MLECQ14165 292 aa27.08■■□□□ 1.93
EDC3-212ENST00000566828 ARHGEF12Q9NZN5 1544 aa27.07■■□□□ 1.92
EDC3-212ENST00000566828 LRRIQ1Q96JM4 1722 aa27.05■■□□□ 1.92
EDC3-212ENST00000566828 C9orf84Q5VXU9 1444 aa27.05■■□□□ 1.92
EDC3-212ENST00000566828 ATP10AO60312 1499 aa27.01■■□□□ 1.91
EDC3-212ENST00000566828 FMN1Q68DA7 1419 aa27■■□□□ 1.91
EDC3-212ENST00000566828 ARHGAP35Q9NRY4 1499 aa27■■□□□ 1.91
EDC3-212ENST00000566828 KDM5CP41229 1560 aa26.99■■□□□ 1.91
EDC3-212ENST00000566828 ARHGAP5Q13017 1502 aa26.99■■□□□ 1.91
EDC3-212ENST00000566828 EHMT2Q96KQ7 1210 aa26.98■■□□□ 1.91
EDC3-212ENST00000566828 ATP1B4Q9UN42 357 aaPredicted RBP26.97■■□□□ 1.91
EDC3-212ENST00000566828 ZNF518AQ6AHZ1 1483 aa26.97■■□□□ 1.91
EDC3-212ENST00000566828 DIP2CQ9Y2E4 1556 aa26.96■■□□□ 1.91
EDC3-212ENST00000566828 CDC42BPBQ9Y5S2 1711 aa26.94■■□□□ 1.9
EDC3-212ENST00000566828 ABCA6Q8N139 1617 aa26.94■■□□□ 1.9
EDC3-212ENST00000566828 STRCQ7RTU9 1775 aa26.93■■□□□ 1.9
EDC3-212ENST00000566828 TROQ12816 1431 aaPredicted RBP26.92■■□□□ 1.9
EDC3-212ENST00000566828 EFCAB2Q5VUJ9 269 aa26.92■■□□□ 1.9
EDC3-212ENST00000566828 PREX2Q70Z35 1606 aa26.9■■□□□ 1.9
EDC3-212ENST00000566828 CERKQ8TCT0 537 aa26.9■■□□□ 1.9
EDC3-212ENST00000566828 UBTFP17480 764 aaKnown RBP26.89■■□□□ 1.9
EDC3-212ENST00000566828 CLIP1P30622 1438 aa26.89■■□□□ 1.89
EDC3-212ENST00000566828 C3P01024 1663 aa26.89■■□□□ 1.89
EDC3-212ENST00000566828 REREQ9P2R6 1566 aa26.88■■□□□ 1.89
EDC3-212ENST00000566828 ITSN2Q9NZM3 1697 aa26.88■■□□□ 1.89
EDC3-212ENST00000566828 CEBPAP49715 358 aaPredicted RBP26.87■■□□□ 1.89
EDC3-212ENST00000566828 CDK11AQ9UQ88 783 aaPredicted RBP26.86■■□□□ 1.89
EDC3-212ENST00000566828 ABCC1P33527 1531 aa26.85■■□□□ 1.89
EDC3-212ENST00000566828 UHRF1BP1Q6BDS2 1440 aa26.83■■□□□ 1.89
EDC3-212ENST00000566828 AFAP1Q8N556 730 aa26.82■■□□□ 1.88
EDC3-212ENST00000566828 CDC42BPAQ5VT25 1732 aa26.8■■□□□ 1.88
EDC3-212ENST00000566828 MYT1LQ9UL68 1186 aa26.8■■□□□ 1.88
EDC3-212ENST00000566828 MLH3Q9UHC1 1453 aa26.78■■□□□ 1.88
EDC3-212ENST00000566828 SETD1BQ9UPS6 1966 aaKnown RBP26.78■■□□□ 1.88
EDC3-212ENST00000566828 KIDINS220Q9ULH0 1771 aa26.77■■□□□ 1.88
EDC3-212ENST00000566828 AGLP35573 1532 aa26.75■■□□□ 1.87
EDC3-212ENST00000566828 TRAPPC8Q9Y2L5 1435 aa26.75■■□□□ 1.87
EDC3-212ENST00000566828 CCDC18Q5T9S5 1454 aa26.74■■□□□ 1.87
EDC3-212ENST00000566828 CASKIN1Q8WXD9 1431 aa26.68■■□□□ 1.86
EDC3-212ENST00000566828 DMRT2Q9Y5R5 561 aa26.67■■□□□ 1.86
EDC3-212ENST00000566828 SAMD9LQ8IVG5 1584 aa26.67■■□□□ 1.86
EDC3-212ENST00000566828 MROH2AA6NES4 1674 aa26.66■■□□□ 1.86
EDC3-212ENST00000566828 SYCP2Q9BX26 1530 aa26.65■■□□□ 1.86
EDC3-212ENST00000566828 SUPT6HQ7KZ85 1726 aaKnown RBP26.64■■□□□ 1.85
EDC3-212ENST00000566828 PTPRTO14522 1441 aa26.64■■□□□ 1.85
EDC3-212ENST00000566828 ESF1Q9H501 851 aaKnown RBP26.62■■□□□ 1.85
EDC3-212ENST00000566828 FYCO1Q9BQS8 1478 aa26.62■■□□□ 1.85
EDC3-212ENST00000566828 CNTLNQ9NXG0 1405 aa26.61■■□□□ 1.85
EDC3-212ENST00000566828 LTBP4Q8N2S1 1624 aa26.61■■□□□ 1.85
EDC3-212ENST00000566828 SPATA31D1Q6ZQQ2 1576 aa26.6■■□□□ 1.85
EDC3-212ENST00000566828 DISP3Q9P2K9 1392 aa26.59■■□□□ 1.85
EDC3-212ENST00000566828 NCOA1Q15788 1441 aa26.59■■□□□ 1.85
EDC3-212ENST00000566828 CLTCQ00610 1675 aaKnown RBP26.58■■□□□ 1.85
EDC3-212ENST00000566828 CHIC1Q5VXU3 224 aa26.57■■□□□ 1.84
EDC3-212ENST00000566828 INO80Q9ULG1 1556 aaPredicted RBP26.57■■□□□ 1.84
EDC3-212ENST00000566828 CAMSAP1Q5T5Y3 1602 aa26.57■■□□□ 1.84
EDC3-212ENST00000566828 MYO3AQ8NEV4 1616 aa26.56■■□□□ 1.84
EDC3-212ENST00000566828 ATP7AQ04656 1500 aa26.55■■□□□ 1.84
EDC3-212ENST00000566828 ZNF142P52746 1687 aaPredicted RBP26.55■■□□□ 1.84
EDC3-212ENST00000566828 PLXNC1O60486 1568 aa26.54■■□□□ 1.84
EDC3-212ENST00000566828 GPATCH8Q9UKJ3 1502 aaKnown RBP26.51■■□□□ 1.83
EDC3-212ENST00000566828 NPATQ14207 1427 aa26.51■■□□□ 1.83
EDC3-212ENST00000566828 ILDR2Q71H61 639 aa26.51■■□□□ 1.83
EDC3-212ENST00000566828 ZNF777Q9ULD5 760 aaPredicted RBP26.51■■□□□ 1.83
EDC3-212ENST00000566828 IQSEC2Q5JU85 1478 aa26.5■■□□□ 1.83
EDC3-212ENST00000566828 SPAG9O60271 1321 aaKnown RBP26.46■■□□□ 1.83
EDC3-212ENST00000566828 ADGBQ8N7X0 1667 aa26.45■■□□□ 1.82
EDC3-212ENST00000566828 CEP170BQ9Y4F5 1589 aaPredicted RBP26.45■■□□□ 1.82
EDC3-212ENST00000566828 ZMYM3Q14202 1370 aa26.44■■□□□ 1.82
EDC3-212ENST00000566828 A2MP01023 1474 aa26.43■■□□□ 1.82
EDC3-212ENST00000566828 PLEKHH2Q8IVE3 1493 aa26.42■■□□□ 1.82
EDC3-212ENST00000566828 HNRNPMP52272 730 aaKnown RBP eCLIP26.42■■□□□ 1.82
EDC3-212ENST00000566828 KIAA1107Q9UPP5 1409 aa26.39■■□□□ 1.82
EDC3-212ENST00000566828 TIAM1Q13009 1591 aa26.38■■□□□ 1.81
EDC3-212ENST00000566828 PLA2R1Q13018 1463 aa26.38■■□□□ 1.81
EDC3-212ENST00000566828 PTPRKQ15262 1439 aa26.37■■□□□ 1.81
EDC3-212ENST00000566828 NCKAP5LQ9HCH0 1330 aa26.37■■□□□ 1.81
EDC3-212ENST00000566828 CCNB3Q8WWL7 1395 aa26.36■■□□□ 1.81
EDC3-212ENST00000566828 SOCS7O14512 581 aa26.36■■□□□ 1.81
EDC3-212ENST00000566828 TCOF1Q13428 1488 aaKnown RBP26.35■■□□□ 1.81
EDC3-212ENST00000566828 ZNF335Q9H4Z2 1342 aaPredicted RBP26.35■■□□□ 1.81
EDC3-212ENST00000566828 CFDP1Q9UEE9 299 aaPredicted RBP26.34■■□□□ 1.81
EDC3-212ENST00000566828 POLR1AO95602 1720 aaPredicted RBP26.33■■□□□ 1.81
EDC3-212ENST00000566828 MTUS2Q5JR59 1369 aa26.32■■□□□ 1.8
EDC3-212ENST00000566828 EHBP1L1Q8N3D4 1523 aa26.31■■□□□ 1.8
EDC3-212ENST00000566828 GGT6Q6P531 493 aa26.3■■□□□ 1.8
EDC3-212ENST00000566828 DNMT1P26358 1616 aaKnown RBP26.29■■□□□ 1.8
EDC3-212ENST00000566828 A2ML1A8K2U0 1454 aa26.25■■□□□ 1.79
EDC3-212ENST00000566828 PKD2Q13563 968 aa26.25■■□□□ 1.79
EDC3-212ENST00000566828 MBD5Q9P267 1494 aa26.24■■□□□ 1.79
EDC3-212ENST00000566828 ZNF644Q9H582 1327 aaPredicted RBP26.23■■□□□ 1.79
EDC3-212ENST00000566828 UBAP1LF5GYI3 381 aa26.23■■□□□ 1.79
EDC3-212ENST00000566828 NEURL4Q96JN8 1562 aa26.23■■□□□ 1.79
EDC3-212ENST00000566828 KDM5DQ9BY66 1539 aa26.19■■□□□ 1.78
EDC3-212ENST00000566828 RTEL1-TNFRSF6BF6WH68 1400 aa26.18■■□□□ 1.78
EDC3-212ENST00000566828 PPP6R1Q9UPN7 881 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms