RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 DAPK1P53355 1430 aa23.7■■□□□ 1.38
VAC14-208ENST00000566655 RAB3GAP2Q9H2M9 1393 aa23.69■■□□□ 1.38
VAC14-208ENST00000566655 PREX2Q70Z35 1606 aa23.67■■□□□ 1.38
VAC14-208ENST00000566655 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
VAC14-208ENST00000566655 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
VAC14-208ENST00000566655 PLCH2O75038 1416 aa23.66■■□□□ 1.38
VAC14-208ENST00000566655 DNMT1P26358 1616 aaKnown RBP23.66■■□□□ 1.38
VAC14-208ENST00000566655 NPM1P06748 294 aaKnown RBP eCLIP23.65■■□□□ 1.38
VAC14-208ENST00000566655 CCER1Q8TC90 406 aaPredicted RBP23.65■■□□□ 1.38
VAC14-208ENST00000566655 AKNAQ7Z591 1439 aa23.65■■□□□ 1.38
VAC14-208ENST00000566655 NAIPQ13075 1403 aa23.64■■□□□ 1.37
VAC14-208ENST00000566655 ZNF777Q9ULD5 760 aaPredicted RBP23.64■■□□□ 1.37
VAC14-208ENST00000566655 CDC42BPBQ9Y5S2 1711 aa23.63■■□□□ 1.37
VAC14-208ENST00000566655 MBD5Q9P267 1494 aa23.62■■□□□ 1.37
VAC14-208ENST00000566655 SAMD9LQ8IVG5 1584 aa23.62■■□□□ 1.37
VAC14-208ENST00000566655 ROCK1Q13464 1354 aa23.61■■□□□ 1.37
VAC14-208ENST00000566655 DHX57Q6P158 1386 aaKnown RBP23.61■■□□□ 1.37
VAC14-208ENST00000566655 ARAP3Q8WWN8 1544 aa23.59■■□□□ 1.37
VAC14-208ENST00000566655 CHIC2Q9UKJ5 165 aa23.59■■□□□ 1.37
VAC14-208ENST00000566655 ABCA9Q8IUA7 1624 aa23.59■■□□□ 1.37
VAC14-208ENST00000566655 ARHGAP5Q13017 1502 aa23.58■■□□□ 1.37
VAC14-208ENST00000566655 ZEB1P37275 1124 aaPredicted RBP23.58■■□□□ 1.37
VAC14-208ENST00000566655 ARHGEF5Q12774 1597 aa23.56■■□□□ 1.36
VAC14-208ENST00000566655 KIAA1107Q9UPP5 1409 aa23.56■■□□□ 1.36
VAC14-208ENST00000566655 MAPKBP1O60336 1514 aa23.56■■□□□ 1.36
VAC14-208ENST00000566655 MYO5CQ9NQX4 1742 aa23.56■■□□□ 1.36
VAC14-208ENST00000566655 ADGRL2O95490 1459 aa23.55■■□□□ 1.36
VAC14-208ENST00000566655 RRP7BPQ9NSQ0 103 aa23.54■■□□□ 1.36
VAC14-208ENST00000566655 SHANK2Q9UPX8 1470 aa23.54■■□□□ 1.36
VAC14-208ENST00000566655 HNRNPMP52272 730 aaKnown RBP eCLIP23.53■■□□□ 1.36
VAC14-208ENST00000566655 EFCAB2Q5VUJ9 269 aa23.53■■□□□ 1.36
VAC14-208ENST00000566655 PLEKHH2Q8IVE3 1493 aa23.52■■□□□ 1.36
VAC14-208ENST00000566655 ARHGEF12Q9NZN5 1544 aa23.51■■□□□ 1.35
VAC14-208ENST00000566655 NCOA1Q15788 1441 aa23.51■■□□□ 1.35
VAC14-208ENST00000566655 RSPH4AQ5TD94 716 aa23.51■■□□□ 1.35
VAC14-208ENST00000566655 CROCC2H7BZ55 1655 aa23.5■■□□□ 1.35
VAC14-208ENST00000566655 CCDC141Q6ZP82 1450 aa23.49■■□□□ 1.35
VAC14-208ENST00000566655 GCC2Q8IWJ2 1684 aa23.48■■□□□ 1.35
VAC14-208ENST00000566655 SYCP2Q9BX26 1530 aa23.48■■□□□ 1.35
VAC14-208ENST00000566655 C9orf84Q5VXU9 1444 aa23.47■■□□□ 1.35
VAC14-208ENST00000566655 ABCC1P33527 1531 aa23.47■■□□□ 1.35
VAC14-208ENST00000566655 CLSPNQ9HAW4 1339 aa23.46■■□□□ 1.35
VAC14-208ENST00000566655 KDM6BO15054 1643 aa23.46■■□□□ 1.35
VAC14-208ENST00000566655 FANCAO15360 1455 aa23.44■■□□□ 1.34
VAC14-208ENST00000566655 ANKRD30AQ9BXX3 1397 aa23.43■■□□□ 1.34
VAC14-208ENST00000566655 TSPY4P0CV99 314 aa23.42■■□□□ 1.34
VAC14-208ENST00000566655 TSPY10P0CW01 314 aa23.42■■□□□ 1.34
VAC14-208ENST00000566655 CD109Q6YHK3 1445 aa23.42■■□□□ 1.34
VAC14-208ENST00000566655 TRAPPC8Q9Y2L5 1435 aa23.41■■□□□ 1.34
VAC14-208ENST00000566655 MAST1Q9Y2H9 1570 aa23.41■■□□□ 1.34
VAC14-208ENST00000566655 ADGBQ8N7X0 1667 aa23.41■■□□□ 1.34
VAC14-208ENST00000566655 GLI2P10070 1586 aa23.4■■□□□ 1.34
VAC14-208ENST00000566655 KIF15Q9NS87 1388 aa23.33■■□□□ 1.32
VAC14-208ENST00000566655 ADGRL1O94910 1474 aa23.32■■□□□ 1.32
VAC14-208ENST00000566655 SCAPERQ9BY12 1400 aa23.32■■□□□ 1.32
VAC14-208ENST00000566655 ANKRD50Q9ULJ7 1429 aa23.32■■□□□ 1.32
VAC14-208ENST00000566655 DENND4BO75064 1496 aaPredicted RBP23.32■■□□□ 1.32
VAC14-208ENST00000566655 ACIN1Q9UKV3 1341 aaKnown RBP23.32■■□□□ 1.32
VAC14-208ENST00000566655 DIP2BQ9P265 1576 aa23.32■■□□□ 1.32
VAC14-208ENST00000566655 AFAP1Q8N556 730 aa23.31■■□□□ 1.32
VAC14-208ENST00000566655 MAP3K4Q9Y6R4 1608 aa23.3■■□□□ 1.32
VAC14-208ENST00000566655 RTEL1-TNFRSF6BF6WH68 1400 aa23.3■■□□□ 1.32
VAC14-208ENST00000566655 PLXNC1O60486 1568 aa23.29■■□□□ 1.32
VAC14-208ENST00000566655 NEO1Q92859 1461 aa23.28■■□□□ 1.32
VAC14-208ENST00000566655 FAM69CQ0P6D2 419 aa23.27■■□□□ 1.31
VAC14-208ENST00000566655 CFAP74Q9C0B2 1584 aa23.26■■□□□ 1.31
VAC14-208ENST00000566655 SPAG9O60271 1321 aaKnown RBP23.24■■□□□ 1.31
VAC14-208ENST00000566655 ZFYVE16Q7Z3T8 1539 aa23.24■■□□□ 1.31
VAC14-208ENST00000566655 TRIM52Q96A61 297 aa23.24■■□□□ 1.31
VAC14-208ENST00000566655 MPHOSPH9Q99550 1183 aa23.24■■□□□ 1.31
VAC14-208ENST00000566655 PZPP20742 1482 aa23.23■■□□□ 1.31
VAC14-208ENST00000566655 POGZQ7Z3K3 1410 aa23.21■■□□□ 1.31
VAC14-208ENST00000566655 INO80Q9ULG1 1556 aaPredicted RBP23.21■■□□□ 1.31
VAC14-208ENST00000566655 DUOX2Q9NRD8 1548 aa23.2■■□□□ 1.31
VAC14-208ENST00000566655 ZNF518AQ6AHZ1 1483 aa23.19■■□□□ 1.3
VAC14-208ENST00000566655 KDM5DQ9BY66 1539 aa23.18■■□□□ 1.3
VAC14-208ENST00000566655 KDM5CP41229 1560 aa23.18■■□□□ 1.3
VAC14-208ENST00000566655 ERBINQ96RT1 1412 aa23.17■■□□□ 1.3
VAC14-208ENST00000566655 SIN3AQ96ST3 1273 aa23.17■■□□□ 1.3
VAC14-208ENST00000566655 ATP7AQ04656 1500 aa23.16■■□□□ 1.3
VAC14-208ENST00000566655 MLH3Q9UHC1 1453 aa23.14■■□□□ 1.29
VAC14-208ENST00000566655 PPRC1Q5VV67 1664 aaKnown RBP23.14■■□□□ 1.29
VAC14-208ENST00000566655 NUP155O75694 1391 aa23.12■■□□□ 1.29
VAC14-208ENST00000566655 SLC4A1APQ9BWU0 796 aaKnown RBP23.12■■□□□ 1.29
VAC14-208ENST00000566655 MAGI2Q86UL8 1455 aa23.1■■□□□ 1.29
VAC14-208ENST00000566655 UNC13BO14795 1591 aa23.1■■□□□ 1.29
VAC14-208ENST00000566655 DHX29Q7Z478 1369 aaKnown RBP23.1■■□□□ 1.29
VAC14-208ENST00000566655 ANKRD30BQ9BXX2 1392 aa23.1■■□□□ 1.29
VAC14-208ENST00000566655 KIDINS220Q9ULH0 1771 aa23.09■■□□□ 1.29
VAC14-208ENST00000566655 RAPGEF3O95398 923 aa23.09■■□□□ 1.29
VAC14-208ENST00000566655 TEX14Q8IWB6 1497 aa23.08■■□□□ 1.28
VAC14-208ENST00000566655 KIF13AQ9H1H9 1805 aa23.08■■□□□ 1.28
VAC14-208ENST00000566655 FOXD1Q16676 465 aa23.07■■□□□ 1.28
VAC14-208ENST00000566655 TIMELESSQ9UNS1 1208 aa23.06■■□□□ 1.28
VAC14-208ENST00000566655 FRMPD1Q5SYB0 1578 aa23.05■■□□□ 1.28
VAC14-208ENST00000566655 NEUROD1Q13562 356 aa23.05■■□□□ 1.28
VAC14-208ENST00000566655 HECW2Q9P2P5 1572 aa23.04■■□□□ 1.28
VAC14-208ENST00000566655 RICTORQ6R327 1708 aa23.04■■□□□ 1.28
VAC14-208ENST00000566655 PKD2Q13563 968 aa23.03■■□□□ 1.28
VAC14-208ENST00000566655 FAM135AQ9P2D6 1515 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms