RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 MAP3K4Q9Y6R4 1608 aa18.02■□□□□ 0.48
KARS-207ENST00000566560 APLP2Q06481 763 aa18.02■□□□□ 0.48
KARS-207ENST00000566560 TTC37Q6PGP7 1564 aa18.02■□□□□ 0.48
KARS-207ENST00000566560 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
KARS-207ENST00000566560 SUPT6HQ7KZ85 1726 aaKnown RBP18■□□□□ 0.47
KARS-207ENST00000566560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.99■□□□□ 0.47
KARS-207ENST00000566560 KCNH8Q96L42 1107 aa17.99■□□□□ 0.47
KARS-207ENST00000566560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.471e-7■■□□□ 12.8
KARS-207ENST00000566560 TRHP20396 242 aaPredicted RBP17.98■□□□□ 0.47
KARS-207ENST00000566560 FAM69CQ0P6D2 419 aa17.98■□□□□ 0.47
KARS-207ENST00000566560 TSPOAP1O95153 1857 aa17.97■□□□□ 0.47
KARS-207ENST00000566560 MYO5CQ9NQX4 1742 aa17.97■□□□□ 0.47
KARS-207ENST00000566560 PPRC1Q5VV67 1664 aaKnown RBP17.94■□□□□ 0.46
KARS-207ENST00000566560 PREX2Q70Z35 1606 aa17.93■□□□□ 0.46
KARS-207ENST00000566560 KANK4Q5T7N3 995 aaPredicted RBP17.92■□□□□ 0.46
KARS-207ENST00000566560 NCOA2Q15596 1464 aa17.92■□□□□ 0.46
KARS-207ENST00000566560 ITSN2Q9NZM3 1697 aa17.92■□□□□ 0.46
KARS-207ENST00000566560 CDC42BPAQ5VT25 1732 aa17.92■□□□□ 0.46
KARS-207ENST00000566560 CD109Q6YHK3 1445 aa17.91■□□□□ 0.46
KARS-207ENST00000566560 CFAP74Q9C0B2 1584 aa17.89■□□□□ 0.45
KARS-207ENST00000566560 TEX14Q8IWB6 1497 aa17.88■□□□□ 0.45
KARS-207ENST00000566560 ARAP3Q8WWN8 1544 aa17.88■□□□□ 0.45
KARS-207ENST00000566560 CDC42BPBQ9Y5S2 1711 aa17.87■□□□□ 0.45
KARS-207ENST00000566560 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
KARS-207ENST00000566560 CCNB3Q8WWL7 1395 aa17.85■□□□□ 0.45
KARS-207ENST00000566560 GPATCH8Q9UKJ3 1502 aaKnown RBP17.84■□□□□ 0.45
KARS-207ENST00000566560 PLCH2O75038 1416 aa17.84■□□□□ 0.45
KARS-207ENST00000566560 FANCAO15360 1455 aa17.83■□□□□ 0.45
KARS-207ENST00000566560 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
KARS-207ENST00000566560 NEO1Q92859 1461 aa17.81■□□□□ 0.44
KARS-207ENST00000566560 MYOM3Q5VTT5 1437 aa17.8■□□□□ 0.44
KARS-207ENST00000566560 SAMD9LQ8IVG5 1584 aa17.79■□□□□ 0.44
KARS-207ENST00000566560 PHLDB1Q86UU1 1377 aa17.79■□□□□ 0.44
KARS-207ENST00000566560 PPARGC1BQ86YN6 1023 aaKnown RBP17.78■□□□□ 0.44
KARS-207ENST00000566560 ABCC1P33527 1531 aa17.77■□□□□ 0.43
KARS-207ENST00000566560 KDM6BO15054 1643 aa17.76■□□□□ 0.43
KARS-207ENST00000566560 ADGRL1O94910 1474 aa17.75■□□□□ 0.43
KARS-207ENST00000566560 CFDP1Q9UEE9 299 aaPredicted RBP17.75■□□□□ 0.43
KARS-207ENST00000566560 AKNAQ7Z591 1439 aa17.74■□□□□ 0.43
KARS-207ENST00000566560 EFCAB2Q5VUJ9 269 aa17.74■□□□□ 0.43
KARS-207ENST00000566560 CAMSAP2Q08AD1 1489 aa17.74■□□□□ 0.43
KARS-207ENST00000566560 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
KARS-207ENST00000566560 SYCP2Q9BX26 1530 aa17.73■□□□□ 0.43
KARS-207ENST00000566560 PTPN23Q9H3S7 1636 aa17.73■□□□□ 0.43
KARS-207ENST00000566560 FGD6Q6ZV73 1430 aa17.72■□□□□ 0.43
KARS-207ENST00000566560 PLEKHH2Q8IVE3 1493 aa17.71■□□□□ 0.43
KARS-207ENST00000566560 ZNF777Q9ULD5 760 aaPredicted RBP17.71■□□□□ 0.43
KARS-207ENST00000566560 U3KPZ7 1027 aaPredicted RBP17.71■□□□□ 0.43
KARS-207ENST00000566560 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
KARS-207ENST00000566560 RICTORQ6R327 1708 aa17.7■□□□□ 0.42
KARS-207ENST00000566560 POGZQ7Z3K3 1410 aa17.68■□□□□ 0.42
KARS-207ENST00000566560 SCAPERQ9BY12 1400 aa17.68■□□□□ 0.42
KARS-207ENST00000566560 DENND4BO75064 1496 aaPredicted RBP17.68■□□□□ 0.42
KARS-207ENST00000566560 TCOF1Q13428 1488 aaKnown RBP17.68■□□□□ 0.42
KARS-207ENST00000566560 ARHGEF12Q9NZN5 1544 aa17.67■□□□□ 0.42
KARS-207ENST00000566560 KIAA1107Q9UPP5 1409 aa17.66■□□□□ 0.42
KARS-207ENST00000566560 COL17A1Q9UMD9 1497 aaPredicted RBP17.66■□□□□ 0.42
KARS-207ENST00000566560 ZNF644Q9H582 1327 aaPredicted RBP17.65■□□□□ 0.42
KARS-207ENST00000566560 ARHGEF5Q12774 1597 aa17.65■□□□□ 0.42
KARS-207ENST00000566560 ZNF518AQ6AHZ1 1483 aa17.64■□□□□ 0.41
KARS-207ENST00000566560 KDM5CP41229 1560 aa17.64■□□□□ 0.41
KARS-207ENST00000566560 CROCC2H7BZ55 1655 aa17.64■□□□□ 0.41
KARS-207ENST00000566560 ZMYM4Q5VZL5 1548 aa17.63■□□□□ 0.41
KARS-207ENST00000566560 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
KARS-207ENST00000566560 HECW2Q9P2P5 1572 aa17.62■□□□□ 0.41
KARS-207ENST00000566560 DNMT1P26358 1616 aaKnown RBP17.62■□□□□ 0.41
KARS-207ENST00000566560 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
KARS-207ENST00000566560 TRAPPC8Q9Y2L5 1435 aa17.62■□□□□ 0.41
KARS-207ENST00000566560 MBD5Q9P267 1494 aa17.62■□□□□ 0.41
KARS-207ENST00000566560 INO80Q9ULG1 1556 aaPredicted RBP17.59■□□□□ 0.41
KARS-207ENST00000566560 RAPGEF3O95398 923 aa17.59■□□□□ 0.41
KARS-207ENST00000566560 ZFYVE16Q7Z3T8 1539 aa17.58■□□□□ 0.41
KARS-207ENST00000566560 ARHGEF40Q8TER5 1519 aa17.58■□□□□ 0.41
KARS-207ENST00000566560 HNRNPMP52272 730 aaKnown RBP eCLIP17.58■□□□□ 0.4
KARS-207ENST00000566560 FAM50AQ14320 339 aaKnown RBP17.57■□□□□ 0.4
KARS-207ENST00000566560 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
KARS-207ENST00000566560 ATP7AQ04656 1500 aa17.56■□□□□ 0.4
KARS-207ENST00000566560 SHANK2Q9UPX8 1470 aa17.56■□□□□ 0.4
KARS-207ENST00000566560 DAPK1P53355 1430 aa17.55■□□□□ 0.4
KARS-207ENST00000566560 MAST1Q9Y2H9 1570 aa17.55■□□□□ 0.4
KARS-207ENST00000566560 KIDINS220Q9ULH0 1771 aa17.55■□□□□ 0.4
KARS-207ENST00000566560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.54■□□□□ 0.4
KARS-207ENST00000566560 ATXN8OSP0DMR3 200 aa17.54■□□□□ 0.4
KARS-207ENST00000566560 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
KARS-207ENST00000566560 AFAP1Q8N556 730 aa17.54■□□□□ 0.4
KARS-207ENST00000566560 MAGI2Q86UL8 1455 aa17.54■□□□□ 0.4
KARS-207ENST00000566560 ADGBQ8N7X0 1667 aa17.54■□□□□ 0.4
KARS-207ENST00000566560 ABCA6Q8N139 1617 aa17.54■□□□□ 0.4
KARS-207ENST00000566560 MLH3Q9UHC1 1453 aa17.53■□□□□ 0.4
KARS-207ENST00000566560 ABCC5O15440 1437 aa17.53■□□□□ 0.4
KARS-207ENST00000566560 C9orf84Q5VXU9 1444 aa17.53■□□□□ 0.4
KARS-207ENST00000566560 DIP2CQ9Y2E4 1556 aa17.52■□□□□ 0.39
KARS-207ENST00000566560 RSPH4AQ5TD94 716 aa17.51■□□□□ 0.39
KARS-207ENST00000566560 SPAG9O60271 1321 aaKnown RBP17.5■□□□□ 0.39
KARS-207ENST00000566560 PLXNC1O60486 1568 aa17.5■□□□□ 0.39
KARS-207ENST00000566560 YEATS2Q9ULM3 1422 aa17.5■□□□□ 0.39
KARS-207ENST00000566560 RTEL1-TNFRSF6BF6WH68 1400 aa17.48■□□□□ 0.39
KARS-207ENST00000566560 MYT1LQ9UL68 1186 aa17.48■□□□□ 0.39
KARS-207ENST00000566560 TSPY4P0CV99 314 aa17.46■□□□□ 0.39
KARS-207ENST00000566560 TSPY10P0CW01 314 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms