RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 ABCC5O15440 1437 aa16.78■□□□□ 0.28
LINC00562-201ENST00000566385 DAPK1P53355 1430 aa16.78■□□□□ 0.28
LINC00562-201ENST00000566385 DNMT1P26358 1616 aaKnown RBP16.77■□□□□ 0.27
LINC00562-201ENST00000566385 TTC37Q6PGP7 1564 aa16.76■□□□□ 0.27
LINC00562-201ENST00000566385 MAPKBP1O60336 1514 aa16.75■□□□□ 0.27
LINC00562-201ENST00000566385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.75■□□□□ 0.27
LINC00562-201ENST00000566385 CDC42BPBQ9Y5S2 1711 aa16.74■□□□□ 0.27
LINC00562-201ENST00000566385 KDM6BO15054 1643 aa16.74■□□□□ 0.27
LINC00562-201ENST00000566385 CLSPNQ9HAW4 1339 aa16.74■□□□□ 0.27
LINC00562-201ENST00000566385 PREX2Q70Z35 1606 aa16.7■□□□□ 0.26
LINC00562-201ENST00000566385 HNRNPMP52272 730 aaKnown RBP eCLIP16.7■□□□□ 0.26
LINC00562-201ENST00000566385 GCC2Q8IWJ2 1684 aa16.7■□□□□ 0.26
LINC00562-201ENST00000566385 AKNAQ7Z591 1439 aa16.69■□□□□ 0.26
LINC00562-201ENST00000566385 SAMD9LQ8IVG5 1584 aa16.68■□□□□ 0.26
LINC00562-201ENST00000566385 SIN3AQ96ST3 1273 aa16.67■□□□□ 0.26
LINC00562-201ENST00000566385 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
LINC00562-201ENST00000566385 CROCC2H7BZ55 1655 aa16.66■□□□□ 0.26
LINC00562-201ENST00000566385 ARHGAP5Q13017 1502 aa16.66■□□□□ 0.26
LINC00562-201ENST00000566385 MYO5CQ9NQX4 1742 aa16.65■□□□□ 0.26
LINC00562-201ENST00000566385 MBD5Q9P267 1494 aa16.65■□□□□ 0.26
LINC00562-201ENST00000566385 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
LINC00562-201ENST00000566385 WDR7Q9Y4E6 1490 aa16.63■□□□□ 0.25
LINC00562-201ENST00000566385 TRIM52Q96A61 297 aa16.62■□□□□ 0.25
LINC00562-201ENST00000566385 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
LINC00562-201ENST00000566385 NEUROD1Q13562 356 aa16.62■□□□□ 0.25
LINC00562-201ENST00000566385 DENND4BO75064 1496 aaPredicted RBP16.61■□□□□ 0.25
LINC00562-201ENST00000566385 SYCP2Q9BX26 1530 aa16.61■□□□□ 0.25
LINC00562-201ENST00000566385 PLCH2O75038 1416 aa16.61■□□□□ 0.25
LINC00562-201ENST00000566385 ADGBQ8N7X0 1667 aa16.61■□□□□ 0.25
LINC00562-201ENST00000566385 C9orf84Q5VXU9 1444 aa16.6■□□□□ 0.25
LINC00562-201ENST00000566385 ADGRL2O95490 1459 aa16.6■□□□□ 0.25
LINC00562-201ENST00000566385 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
LINC00562-201ENST00000566385 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
LINC00562-201ENST00000566385 ARHGEF12Q9NZN5 1544 aa16.59■□□□□ 0.25
LINC00562-201ENST00000566385 CYB5RLQ6IPT4 315 aa16.58■□□□□ 0.25
LINC00562-201ENST00000566385 ARHGEF5Q12774 1597 aa16.58■□□□□ 0.24
LINC00562-201ENST00000566385 NPM1P06748 294 aaKnown RBP eCLIP16.57■□□□□ 0.24
LINC00562-201ENST00000566385 ANKRD30AQ9BXX3 1397 aa16.57■□□□□ 0.24
LINC00562-201ENST00000566385 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
LINC00562-201ENST00000566385 SHANK2Q9UPX8 1470 aa16.56■□□□□ 0.24
LINC00562-201ENST00000566385 FOXD1Q16676 465 aa16.56■□□□□ 0.24
LINC00562-201ENST00000566385 EFCAB2Q5VUJ9 269 aa16.55■□□□□ 0.24
LINC00562-201ENST00000566385 MPHOSPH9Q99550 1183 aa16.55■□□□□ 0.24
LINC00562-201ENST00000566385 RIMBP3CA6NJZ7 1639 aa16.55■□□□□ 0.24
LINC00562-201ENST00000566385 RIMBP3BA6NNM3 1639 aa16.55■□□□□ 0.24
LINC00562-201ENST00000566385 RIMBP3Q9UFD9 1639 aa16.55■□□□□ 0.24
LINC00562-201ENST00000566385 ABCA9Q8IUA7 1624 aa16.53■□□□□ 0.24
LINC00562-201ENST00000566385 ANKRD50Q9ULJ7 1429 aa16.53■□□□□ 0.24
LINC00562-201ENST00000566385 KIAA1107Q9UPP5 1409 aa16.52■□□□□ 0.24
LINC00562-201ENST00000566385 RSPH4AQ5TD94 716 aa16.52■□□□□ 0.23
LINC00562-201ENST00000566385 KIF15Q9NS87 1388 aa16.51■□□□□ 0.23
LINC00562-201ENST00000566385 TRAPPC8Q9Y2L5 1435 aa16.51■□□□□ 0.23
LINC00562-201ENST00000566385 ABCC1P33527 1531 aa16.5■□□□□ 0.23
LINC00562-201ENST00000566385 AFAP1Q8N556 730 aa16.49■□□□□ 0.23
LINC00562-201ENST00000566385 PLEKHH2Q8IVE3 1493 aa16.49■□□□□ 0.23
LINC00562-201ENST00000566385 FANCAO15360 1455 aa16.49■□□□□ 0.23
LINC00562-201ENST00000566385 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
LINC00562-201ENST00000566385 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
LINC00562-201ENST00000566385 PZPP20742 1482 aa16.48■□□□□ 0.23
LINC00562-201ENST00000566385 ARAP3Q8WWN8 1544 aa16.47■□□□□ 0.23
LINC00562-201ENST00000566385 MAST1Q9Y2H9 1570 aa16.46■□□□□ 0.22
LINC00562-201ENST00000566385 NUP155O75694 1391 aa16.42■□□□□ 0.22
LINC00562-201ENST00000566385 CD109Q6YHK3 1445 aa16.42■□□□□ 0.22
LINC00562-201ENST00000566385 ADGRL1O94910 1474 aa16.41■□□□□ 0.22
LINC00562-201ENST00000566385 TONSLQ96HA7 1378 aa16.41■□□□□ 0.22
LINC00562-201ENST00000566385 ANKRD30BQ9BXX2 1392 aa16.41■□□□□ 0.22
LINC00562-201ENST00000566385 PPP1R15AO75807 674 aaPredicted RBP16.41■□□□□ 0.22
LINC00562-201ENST00000566385 SCAPERQ9BY12 1400 aa16.41■□□□□ 0.22
LINC00562-201ENST00000566385 TIMELESSQ9UNS1 1208 aa16.41■□□□□ 0.22
LINC00562-201ENST00000566385 PKD2Q13563 968 aa16.4■□□□□ 0.22
LINC00562-201ENST00000566385 PLXNC1O60486 1568 aa16.4■□□□□ 0.22
LINC00562-201ENST00000566385 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
LINC00562-201ENST00000566385 ACIN1Q9UKV3 1341 aaKnown RBP16.39■□□□□ 0.21
LINC00562-201ENST00000566385 DIEXFQ68CQ4 756 aaKnown RBP16.37■□□□□ 0.21
LINC00562-201ENST00000566385 ZFYVE16Q7Z3T8 1539 aa16.37■□□□□ 0.21
LINC00562-201ENST00000566385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.36■□□□□ 0.21
LINC00562-201ENST00000566385 DUOX2Q9NRD8 1548 aa16.35■□□□□ 0.21
LINC00562-201ENST00000566385 KDM5DQ9BY66 1539 aa16.35■□□□□ 0.21
LINC00562-201ENST00000566385 RTEL1-TNFRSF6BF6WH68 1400 aa16.34■□□□□ 0.21
LINC00562-201ENST00000566385 MYT1LQ9UL68 1186 aa16.33■□□□□ 0.2
LINC00562-201ENST00000566385 RPRD2Q5VT52 1461 aaKnown RBP16.33■□□□□ 0.2
LINC00562-201ENST00000566385 FAM135AQ9P2D6 1515 aa16.33■□□□□ 0.2
LINC00562-201ENST00000566385 L3MBTL2Q969R5 705 aa16.33■□□□□ 0.2
LINC00562-201ENST00000566385 ATP7AQ04656 1500 aa16.32■□□□□ 0.2
LINC00562-201ENST00000566385 INO80Q9ULG1 1556 aaPredicted RBP16.32■□□□□ 0.2
LINC00562-201ENST00000566385 UNC13BO14795 1591 aa16.31■□□□□ 0.2
LINC00562-201ENST00000566385 ERBINQ96RT1 1412 aa16.31■□□□□ 0.2
LINC00562-201ENST00000566385 FAM69CQ0P6D2 419 aa16.3■□□□□ 0.2
LINC00562-201ENST00000566385 HIRIP3Q9BW71 556 aaPredicted RBP16.3■□□□□ 0.2
LINC00562-201ENST00000566385 MAP3K4Q9Y6R4 1608 aa16.3■□□□□ 0.2
LINC00562-201ENST00000566385 RAPGEF3O95398 923 aa16.29■□□□□ 0.2
LINC00562-201ENST00000566385 KIDINS220Q9ULH0 1771 aa16.29■□□□□ 0.2
LINC00562-201ENST00000566385 ZNF518AQ6AHZ1 1483 aa16.28■□□□□ 0.2
LINC00562-201ENST00000566385 CFAP74Q9C0B2 1584 aa16.27■□□□□ 0.2
LINC00562-201ENST00000566385 DIP2BQ9P265 1576 aa16.27■□□□□ 0.19
LINC00562-201ENST00000566385 TEX14Q8IWB6 1497 aa16.27■□□□□ 0.19
LINC00562-201ENST00000566385 POGZQ7Z3K3 1410 aa16.27■□□□□ 0.19
LINC00562-201ENST00000566385 MAGI2Q86UL8 1455 aa16.26■□□□□ 0.19
LINC00562-201ENST00000566385 IQGAP3Q86VI3 1631 aa16.25■□□□□ 0.19
LINC00562-201ENST00000566385 GLI2P10070 1586 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms