RNA–Protein interactions for RNA: ENST00000565154.5

PKM-215, Transcript of pyruvate kinase M1/2, human

APPRIS ALT1 TSL 2 BASIC

Gene PKM, Length 2,004 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-215	ENST00000565154	CFDP1	Q9UEE9	299 aa	Predicted RBP	29.85	■■■□□ 2.37
PKM-215	ENST00000565154	ZNF644	Q9H582	1327 aa	Predicted RBP	29.85	■■■□□ 2.37
PKM-215	ENST00000565154	UHRF1BP1L	A0JNW5	1464 aa		29.84	■■■□□ 2.37
PKM-215	ENST00000565154	KDM6B	O15054	1643 aa		29.83	■■■□□ 2.37
PKM-215	ENST00000565154	CHIC2	Q9UKJ5	165 aa		29.83	■■■□□ 2.37
PKM-215	ENST00000565154	PREX2	Q70Z35	1606 aa		29.82	■■■□□ 2.36
PKM-215	ENST00000565154	ZCCHC11	Q5TAX3	1644 aa	Known RBP	29.81	■■■□□ 2.36
PKM-215	ENST00000565154	ZNF316	A6NFI3	1004 aa	Predicted RBP	29.8	■■■□□ 2.36
PKM-215	ENST00000565154	RRP7BP	Q9NSQ0	103 aa		29.8	■■■□□ 2.36
PKM-215	ENST00000565154	CDC42BPB	Q9Y5S2	1711 aa		29.78	■■■□□ 2.36
PKM-215	ENST00000565154	KDM5B	Q9UGL1	1544 aa		29.74	■■■□□ 2.35
PKM-215	ENST00000565154	TTC37	Q6PGP7	1564 aa		29.74	■■■□□ 2.35
PKM-215	ENST00000565154	ADGRL2	O95490	1459 aa		29.73	■■■□□ 2.35
PKM-215	ENST00000565154	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	29.71	■■■□□ 2.35	8e-9	■□□□□ 11.2
PKM-215	ENST00000565154	MYO5C	Q9NQX4	1742 aa		29.71	■■■□□ 2.35
PKM-215	ENST00000565154	SHANK2	Q9UPX8	1470 aa		29.7	■■■□□ 2.35
PKM-215	ENST00000565154	ARHGEF5	Q12774	1597 aa		29.69	■■■□□ 2.34
PKM-215	ENST00000565154	ZNF777	Q9ULD5	760 aa	Predicted RBP	29.69	■■■□□ 2.34
PKM-215	ENST00000565154	SAMD9L	Q8IVG5	1584 aa		29.67	■■■□□ 2.34
PKM-215	ENST00000565154	ACIN1	Q9UKV3	1341 aa	Known RBP	29.66	■■■□□ 2.34
PKM-215	ENST00000565154	SIN3A	Q96ST3	1273 aa		29.64	■■■□□ 2.34
PKM-215	ENST00000565154	NCOA1	Q15788	1441 aa		29.64	■■■□□ 2.34
PKM-215	ENST00000565154	TIMELESS	Q9UNS1	1208 aa		29.64	■■■□□ 2.33
PKM-215	ENST00000565154	DIEXF	Q68CQ4	756 aa	Known RBP	29.63	■■■□□ 2.33
PKM-215	ENST00000565154	DENND4B	O75064	1496 aa	Predicted RBP	29.62	■■■□□ 2.33
PKM-215	ENST00000565154	ARHGAP5	Q13017	1502 aa		29.58	■■■□□ 2.33
PKM-215	ENST00000565154	NEUROD1	Q13562	356 aa		29.58	■■■□□ 2.33
PKM-215	ENST00000565154	MBD5	Q9P267	1494 aa		29.57	■■■□□ 2.33
PKM-215	ENST00000565154	ANKRD30A	Q9BXX3	1397 aa		29.57	■■■□□ 2.32
PKM-215	ENST00000565154	C9orf84	Q5VXU9	1444 aa		29.57	■■■□□ 2.32
PKM-215	ENST00000565154	OSCAR	Q8IYS5	282 aa		29.55	■■■□□ 2.32
PKM-215	ENST00000565154	TRIM52	Q96A61	297 aa		29.55	■■■□□ 2.32
PKM-215	ENST00000565154	CCDC141	Q6ZP82	1450 aa		29.54	■■■□□ 2.32
PKM-215	ENST00000565154	SYCP2	Q9BX26	1530 aa		29.52	■■■□□ 2.32
PKM-215	ENST00000565154	PLEKHH2	Q8IVE3	1493 aa		29.48	■■■□□ 2.31
PKM-215	ENST00000565154	MAST1	Q9Y2H9	1570 aa		29.48	■■■□□ 2.31
PKM-215	ENST00000565154	MPHOSPH9	Q99550	1183 aa		29.48	■■■□□ 2.31
PKM-215	ENST00000565154	TONSL	Q96HA7	1378 aa		29.47	■■■□□ 2.31
PKM-215	ENST00000565154	WDR7	Q9Y4E6	1490 aa		29.46	■■■□□ 2.31
PKM-215	ENST00000565154	PLCH2	O75038	1416 aa		29.45	■■■□□ 2.31
PKM-215	ENST00000565154	ANKRD50	Q9ULJ7	1429 aa		29.45	■■■□□ 2.31
PKM-215	ENST00000565154	ARAP3	Q8WWN8	1544 aa		29.44	■■■□□ 2.3
PKM-215	ENST00000565154	TSPY4	P0CV99	314 aa		29.44	■■■□□ 2.3
PKM-215	ENST00000565154	TSPY10	P0CW01	314 aa		29.44	■■■□□ 2.3
PKM-215	ENST00000565154	HNRNPM	P52272	730 aa	Known RBP eCLIP	29.44	■■■□□ 2.3
PKM-215	ENST00000565154	RSPH4A	Q5TD94	716 aa		29.44	■■■□□ 2.3
PKM-215	ENST00000565154	KIAA1107	Q9UPP5	1409 aa		29.44	■■■□□ 2.3
PKM-215	ENST00000565154	KCNH8	Q96L42	1107 aa		29.43	■■■□□ 2.3
PKM-215	ENST00000565154	PZP	P20742	1482 aa		29.43	■■■□□ 2.3
PKM-215	ENST00000565154	ABCC1	P33527	1531 aa		29.39	■■■□□ 2.3
PKM-215	ENST00000565154	PPP1R15A	O75807	674 aa	Predicted RBP	29.38	■■■□□ 2.29
PKM-215	ENST00000565154	PLXNC1	O60486	1568 aa		29.38	■■■□□ 2.29
PKM-215	ENST00000565154	ABCA9	Q8IUA7	1624 aa		29.38	■■■□□ 2.29
PKM-215	ENST00000565154	KIF15	Q9NS87	1388 aa		29.38	■■■□□ 2.29
PKM-215	ENST00000565154	KDM5D	Q9BY66	1539 aa		29.36	■■■□□ 2.29
PKM-215	ENST00000565154	ANKRD30B	Q9BXX2	1392 aa		29.33	■■■□□ 2.29
PKM-215	ENST00000565154	ARHGEF12	Q9NZN5	1544 aa		29.33	■■■□□ 2.29
PKM-215	ENST00000565154	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.33	■■■□□ 2.29
PKM-215	ENST00000565154	EFCAB2	Q5VUJ9	269 aa		29.3	■■■□□ 2.28
PKM-215	ENST00000565154	ASXL2	Q76L83	1435 aa		29.29	■■■□□ 2.28
PKM-215	ENST00000565154	RPRD2	Q5VT52	1461 aa	Known RBP	29.29	■■■□□ 2.28
PKM-215	ENST00000565154	FOXD1	Q16676	465 aa		29.27	■■■□□ 2.28
PKM-215	ENST00000565154	UNC13B	O14795	1591 aa		29.24	■■■□□ 2.27
PKM-215	ENST00000565154	DUOX2	Q9NRD8	1548 aa		29.2	■■■□□ 2.27
PKM-215	ENST00000565154	NUP155	O75694	1391 aa		29.2	■■■□□ 2.26
PKM-215	ENST00000565154	FANCA	O15360	1455 aa		29.19	■■■□□ 2.26
PKM-215	ENST00000565154	TEX14	Q8IWB6	1497 aa		29.19	■■■□□ 2.26
PKM-215	ENST00000565154	TRAPPC8	Q9Y2L5	1435 aa		29.18	■■■□□ 2.26
PKM-215	ENST00000565154	ZFYVE16	Q7Z3T8	1539 aa		29.15	■■■□□ 2.26
PKM-215	ENST00000565154	FAM135A	Q9P2D6	1515 aa		29.15	■■■□□ 2.26
PKM-215	ENST00000565154	NPM1	P06748	294 aa	Known RBP eCLIP	29.15	■■■□□ 2.26
PKM-215	ENST00000565154	ERBIN	Q96RT1	1412 aa		29.14	■■■□□ 2.25
PKM-215	ENST00000565154	PKD2	Q13563	968 aa		29.13	■■■□□ 2.25
PKM-215	ENST00000565154	IQGAP3	Q86VI3	1631 aa		29.12	■■■□□ 2.25
PKM-215	ENST00000565154	INO80	Q9ULG1	1556 aa	Predicted RBP	29.11	■■■□□ 2.25
PKM-215	ENST00000565154	RTEL1-TNFRSF6B	F6WH68	1400 aa		29.1	■■■□□ 2.25
PKM-215	ENST00000565154	MAGI2	Q86UL8	1455 aa		29.1	■■■□□ 2.25
PKM-215	ENST00000565154	MIER1	Q8N108	512 aa		29.09	■■■□□ 2.25
PKM-215	ENST00000565154	CFAP74	Q9C0B2	1584 aa		29.08	■■■□□ 2.25
PKM-215	ENST00000565154	L3MBTL2	Q969R5	705 aa		29.08	■■■□□ 2.25
PKM-215	ENST00000565154	ADGRL1	O94910	1474 aa		29.07	■■■□□ 2.24
PKM-215	ENST00000565154	ATP7A	Q04656	1500 aa		29.04	■■■□□ 2.24
PKM-215	ENST00000565154	SPAG9	O60271	1321 aa	Known RBP	29.03	■■■□□ 2.24
PKM-215	ENST00000565154	RIMBP3C	A6NJZ7	1639 aa		29.01	■■■□□ 2.23
PKM-215	ENST00000565154	RIMBP3B	A6NNM3	1639 aa		29.01	■■■□□ 2.23
PKM-215	ENST00000565154	RIMBP3	Q9UFD9	1639 aa		29.01	■■■□□ 2.23
PKM-215	ENST00000565154	SCAPER	Q9BY12	1400 aa		28.98	■■■□□ 2.23
PKM-215	ENST00000565154	AFAP1	Q8N556	730 aa		28.98	■■■□□ 2.23
PKM-215	ENST00000565154	DEPDC5	O75140	1603 aa		28.97	■■■□□ 2.23
PKM-215	ENST00000565154	CD109	Q6YHK3	1445 aa		28.95	■■■□□ 2.23
PKM-215	ENST00000565154	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.93	■■■□□ 2.22
PKM-215	ENST00000565154	KIDINS220	Q9ULH0	1771 aa		28.92	■■■□□ 2.22
PKM-215	ENST00000565154	ZNF518A	Q6AHZ1	1483 aa		28.92	■■■□□ 2.22
PKM-215	ENST00000565154	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.91	■■■□□ 2.22
PKM-215	ENST00000565154	KDM5C	P41229	1560 aa		28.88	■■■□□ 2.21
PKM-215	ENST00000565154	NBPF8	Q3BBV2	869 aa		28.88	■■■□□ 2.21
PKM-215	ENST00000565154	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.87	■■■□□ 2.21	3e-16	■□□□□ 9.7
PKM-215	ENST00000565154	MAP3K4	Q9Y6R4	1608 aa		28.86	■■■□□ 2.21
PKM-215	ENST00000565154	POGZ	Q7Z3K3	1410 aa		28.84	■■■□□ 2.21
PKM-215	ENST00000565154	ATP10A	O60312	1499 aa		28.84	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms