RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 PTMAP06454 111 aaKnown RBP8.21□□□□□ -1.1
PTPN9-204ENST00000564970 C14orf37Q86TY3 774 aa8.21□□□□□ -1.1
PTPN9-204ENST00000564970 GTPBP4Q9BZE4 634 aaKnown RBP8.21□□□□□ -1.1
PTPN9-204ENST00000564970 SAMD1Q6SPF0 538 aaPredicted RBP8.2□□□□□ -1.1
PTPN9-204ENST00000564970 FRAT1Q92837 279 aaPredicted RBP8.2□□□□□ -1.1
PTPN9-204ENST00000564970 LETM1O95202 739 aaPredicted RBP8.19□□□□□ -1.1
PTPN9-204ENST00000564970 ARHGEF11O15085 1522 aa8.18□□□□□ -1.1
PTPN9-204ENST00000564970 DMTNQ08495 405 aa8.17□□□□□ -1.1
PTPN9-204ENST00000564970 NFKBIBQ15653 356 aa8.17□□□□□ -1.1
PTPN9-204ENST00000564970 ZNF622Q969S3 477 aaKnown RBP eCLIP8.17□□□□□ -1.1
PTPN9-204ENST00000564970 ZFP91Q96JP5 570 aaPredicted RBP8.17□□□□□ -1.1
PTPN9-204ENST00000564970 CHMP4BQ9H444 224 aaKnown RBP8.17□□□□□ -1.1
PTPN9-204ENST00000564970 TNIKQ9UKE5 1360 aa8.17□□□□□ -1.1
PTPN9-204ENST00000564970 RGS3P49796 1198 aa8.16□□□□□ -1.1
PTPN9-204ENST00000564970 MMP14P50281 582 aa8.16□□□□□ -1.1
PTPN9-204ENST00000564970 SCRIBQ14160 1630 aa8.16□□□□□ -1.1
PTPN9-204ENST00000564970 RRAGDQ9NQL2 400 aaPredicted RBP8.15□□□□□ -1.1
PTPN9-204ENST00000564970 DHX57Q6P158 1386 aaKnown RBP8.14□□□□□ -1.11
PTPN9-204ENST00000564970 CEP120Q8N960 986 aa8.14□□□□□ -1.11
PTPN9-204ENST00000564970 TSPYL1Q9H0U9 437 aa8.14□□□□□ -1.11
PTPN9-204ENST00000564970 RNF216Q9NWF9 866 aaPredicted RBP8.14□□□□□ -1.11
PTPN9-204ENST00000564970 MCCP23508 829 aa8.13□□□□□ -1.11
PTPN9-204ENST00000564970 IRX3P78415 501 aaPredicted RBP8.13□□□□□ -1.11
PTPN9-204ENST00000564970 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.13□□□□□ -1.11
PTPN9-204ENST00000564970 DHX37Q8IY37 1157 aaKnown RBP8.13□□□□□ -1.11
PTPN9-204ENST00000564970 PPP1R15AO75807 674 aaPredicted RBP8.12□□□□□ -1.11
PTPN9-204ENST00000564970 CLSTN1O94985 981 aa8.12□□□□□ -1.11
PTPN9-204ENST00000564970 PLPPR3Q6T4P5 718 aa8.12□□□□□ -1.11
PTPN9-204ENST00000564970 YY1AP1Q9H869 796 aa8.12□□□□□ -1.11
PTPN9-204ENST00000564970 RNF123Q5XPI4 1314 aa8.11□□□□□ -1.11
PTPN9-204ENST00000564970 SMARCA2P51531 1590 aa8.11□□□□□ -1.11
PTPN9-204ENST00000564970 PPP4R3BQ5MIZ7 849 aa8.11□□□□□ -1.11
PTPN9-204ENST00000564970 CYB5RLQ6IPT4 315 aa8.11□□□□□ -1.11
PTPN9-204ENST00000564970 RGS22Q8NE09 1264 aa8.11□□□□□ -1.11
PTPN9-204ENST00000564970 TAOK2Q9UL54 1235 aa8.11□□□□□ -1.11
PTPN9-204ENST00000564970 CEP162Q5TB80 1403 aa8.11□□□□□ -1.11
PTPN9-204ENST00000564970 ZBED9Q6R2W3 1325 aa8.1□□□□□ -1.11
PTPN9-204ENST00000564970 GRIPAP1Q4V328 841 aa8.1□□□□□ -1.11
PTPN9-204ENST00000564970 SECISBP2LQ93073 1101 aaKnown RBP8.1□□□□□ -1.11
PTPN9-204ENST00000564970 DNAJC2Q99543 621 aaKnown RBP8.1□□□□□ -1.11
PTPN9-204ENST00000564970 TMEM51Q9NW97 253 aa8.1□□□□□ -1.11
PTPN9-204ENST00000564970 PEG3Q9GZU2 1588 aa8.1□□□□□ -1.11
PTPN9-204ENST00000564970 PHF14O94880 888 aa8.09□□□□□ -1.11
PTPN9-204ENST00000564970 TICAM2Q86XR7 235 aa8.09□□□□□ -1.11
PTPN9-204ENST00000564970 PHLDB1Q86UU1 1377 aa8.09□□□□□ -1.12
PTPN9-204ENST00000564970 ESPNB1AK53 854 aa8.08□□□□□ -1.12
PTPN9-204ENST00000564970 DYNC1I1O14576 645 aa8.08□□□□□ -1.12
PTPN9-204ENST00000564970 MRE11P49959 708 aa8.08□□□□□ -1.12
PTPN9-204ENST00000564970 DCAF11Q8TEB1 546 aa8.08□□□□□ -1.12
PTPN9-204ENST00000564970 BACH2Q9BYV9 841 aa8.08□□□□□ -1.12
PTPN9-204ENST00000564970 SMG6Q86US8 1419 aaKnown RBP8.07□□□□□ -1.12
PTPN9-204ENST00000564970 SETQ01105 290 aaPredicted RBP8.07□□□□□ -1.12
PTPN9-204ENST00000564970 HAP1P54257 671 aaPredicted RBP8.06□□□□□ -1.12
PTPN9-204ENST00000564970 FAM193AP78312 1265 aa8.06□□□□□ -1.12
PTPN9-204ENST00000564970 TRIM52Q96A61 297 aa8.06□□□□□ -1.12
PTPN9-204ENST00000564970 CCDC9Q9Y3X0 531 aaKnown RBP8.06□□□□□ -1.12
PTPN9-204ENST00000564970 ARAP1Q96P48 1450 aa8.06□□□□□ -1.12
PTPN9-204ENST00000564970 CEP164Q9UPV0 1460 aa8.06□□□□□ -1.12
PTPN9-204ENST00000564970 FSD2A1L4K1 749 aa8.05□□□□□ -1.12
PTPN9-204ENST00000564970 SOCS7O14512 581 aa8.05□□□□□ -1.12
PTPN9-204ENST00000564970 HS1BP3Q53T59 392 aa8.05□□□□□ -1.12
PTPN9-204ENST00000564970 DNTTIP2Q5QJE6 756 aaKnown RBP8.05□□□□□ -1.12
PTPN9-204ENST00000564970 B4GALNT3Q6L9W6 998 aa8.05□□□□□ -1.12
PTPN9-204ENST00000564970 POLR3GLQ9BT43 218 aa8.05□□□□□ -1.12
PTPN9-204ENST00000564970 CCDC94Q9BW85 323 aaPredicted RBP8.05□□□□□ -1.12
PTPN9-204ENST00000564970 GEMIN8Q9NWZ8 242 aaKnown RBP8.05□□□□□ -1.12
PTPN9-204ENST00000564970 KIF21AQ7Z4S6 1674 aa8.05□□□□□ -1.12
PTPN9-204ENST00000564970 CCDC144AA2RUR9 1427 aa8.04□□□□□ -1.12
PTPN9-204ENST00000564970 OFD1O75665 1012 aa8.04□□□□□ -1.12
PTPN9-204ENST00000564970 PDE4AP27815 886 aa8.04□□□□□ -1.12
PTPN9-204ENST00000564970 HNRNPUQ00839 825 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTPN9-204ENST00000564970 CSPP1Q1MSJ5 1256 aa8.04□□□□□ -1.12
PTPN9-204ENST00000564970 CREBRFQ8IUR6 639 aa8.03□□□□□ -1.12
PTPN9-204ENST00000564970 KCNH8Q96L42 1107 aa8.03□□□□□ -1.12
PTPN9-204ENST00000564970 WDR62O43379 1518 aa8.03□□□□□ -1.12
PTPN9-204ENST00000564970 NINLQ9Y2I6 1382 aa8.02□□□□□ -1.13
PTPN9-204ENST00000564970 MYH16Q9H6N6 1097 aa8.02□□□□□ -1.13
PTPN9-204ENST00000564970 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.02□□□□□ -1.13
PTPN9-204ENST00000564970 SCAPERQ9BY12 1400 aa8.02□□□□□ -1.13
PTPN9-204ENST00000564970 LAMC3Q9Y6N6 1575 aa8.01□□□□□ -1.13
PTPN9-204ENST00000564970 LMTK3Q96Q04 1460 aa8.01□□□□□ -1.13
PTPN9-204ENST00000564970 CCDC66A2RUB6 948 aa8.01□□□□□ -1.13
PTPN9-204ENST00000564970 DCAF8L1A6NGE4 600 aa8.01□□□□□ -1.13
PTPN9-204ENST00000564970 RALBP1Q15311 655 aa8.01□□□□□ -1.13
PTPN9-204ENST00000564970 KIAA1211Q6ZU35 1233 aa8.01□□□□□ -1.13
PTPN9-204ENST00000564970 ZNF830Q96NB3 372 aaPredicted RBP8.01□□□□□ -1.13
PTPN9-204ENST00000564970 PLCD4Q9BRC7 762 aa8.01□□□□□ -1.13
PTPN9-204ENST00000564970 ZSCAN20P17040 1043 aaPredicted RBP8□□□□□ -1.13
PTPN9-204ENST00000564970 MCM5P33992 734 aa8□□□□□ -1.13
PTPN9-204ENST00000564970 HDAC5Q9UQL6 1122 aa8□□□□□ -1.13
PTPN9-204ENST00000564970 APPP05067 770 aa7.99□□□□□ -1.13
PTPN9-204ENST00000564970 MAPK8IP2Q13387 824 aaPredicted RBP7.99□□□□□ -1.13
PTPN9-204ENST00000564970 NBPF20Q3BBV1 942 aa7.99□□□□□ -1.13
PTPN9-204ENST00000564970 CC2D1BQ5T0F9 858 aaKnown RBP7.99□□□□□ -1.13
PTPN9-204ENST00000564970 CTR9Q6PD62 1173 aa7.99□□□□□ -1.13
PTPN9-204ENST00000564970 CNPY4Q8N129 248 aa7.99□□□□□ -1.13
PTPN9-204ENST00000564970 EFCC1Q9HA90 598 aa7.99□□□□□ -1.13
PTPN9-204ENST00000564970 KDM4FA0A1W2PPD8 638 aa7.98□□□□□ -1.13
PTPN9-204ENST00000564970 NPM1P06748 294 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTPN9-204ENST00000564970 DDX10Q13206 875 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms