RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 ABCC5O15440 1437 aa21.49■■□□□ 1.03
GTF3C1-205ENST00000564747 NBPF8Q3BBV2 869 aa21.48■■□□□ 1.03
GTF3C1-205ENST00000564747 CCDC184Q52MB2 194 aa21.48■■□□□ 1.03
GTF3C1-205ENST00000564747 ROCK1Q13464 1354 aa21.48■■□□□ 1.03
GTF3C1-205ENST00000564747 DISP1Q96F81 1524 aa21.47■■□□□ 1.03
GTF3C1-205ENST00000564747 CNTLNQ9NXG0 1405 aa21.46■■□□□ 1.03
GTF3C1-205ENST00000564747 SLC4A1APQ9BWU0 796 aaKnown RBP21.45■■□□□ 1.02
GTF3C1-205ENST00000564747 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.02
GTF3C1-205ENST00000564747 KIAA0586Q9BVV6 1533 aa21.45■■□□□ 1.02
GTF3C1-205ENST00000564747 RPRD2Q5VT52 1461 aaKnown RBP21.44■■□□□ 1.02
GTF3C1-205ENST00000564747 CCDC7Q96M83 1385 aa21.44■■□□□ 1.02
GTF3C1-205ENST00000564747 RBM19Q9Y4C8 960 aaKnown RBP21.44■■□□□ 1.02
GTF3C1-205ENST00000564747 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
GTF3C1-205ENST00000564747 NCOA1Q15788 1441 aa21.43■■□□□ 1.02
GTF3C1-205ENST00000564747 DNMT1P26358 1616 aaKnown RBP21.43■■□□□ 1.02
GTF3C1-205ENST00000564747 IRX6P78412 446 aaPredicted RBP21.42■■□□□ 1.02
GTF3C1-205ENST00000564747 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
GTF3C1-205ENST00000564747 PRKRIP1Q9H875 184 aaPredicted RBP21.41■■□□□ 1.02
GTF3C1-205ENST00000564747 CDK11AQ9UQ88 783 aaPredicted RBP21.41■■□□□ 1.02
GTF3C1-205ENST00000564747 TEX14Q8IWB6 1497 aa21.4■■□□□ 1.02
GTF3C1-205ENST00000564747 RAPGEF6Q8TEU7 1601 aa21.38■■□□□ 1.01
GTF3C1-205ENST00000564747 PRG4Q92954 1404 aaPredicted RBP21.37■■□□□ 1.01
GTF3C1-205ENST00000564747 FAM9BQ8IZU0 186 aa21.36■■□□□ 1.01
GTF3C1-205ENST00000564747 GRIN2AQ12879 1464 aa21.35■■□□□ 1.01
GTF3C1-205ENST00000564747 CFDP1Q9UEE9 299 aaPredicted RBP21.35■■□□□ 1.01
GTF3C1-205ENST00000564747 KIF7Q2M1P5 1343 aa21.35■■□□□ 1.01
GTF3C1-205ENST00000564747 SPATA31E1Q6ZUB1 1445 aa21.35■■□□□ 1.01
GTF3C1-205ENST00000564747 MRS2Q9HD23 443 aa21.34■■□□□ 1.01
GTF3C1-205ENST00000564747 ZNF777Q9ULD5 760 aaPredicted RBP21.32■■□□□ 1
GTF3C1-205ENST00000564747 PZPP20742 1482 aa21.31■■□□□ 1
GTF3C1-205ENST00000564747 TROQ12816 1431 aaPredicted RBP21.31■■□□□ 1
GTF3C1-205ENST00000564747 CAMSAP2Q08AD1 1489 aa21.3■■□□□ 1
GTF3C1-205ENST00000564747 PLB1Q6P1J6 1458 aa21.29■■□□□ 1
GTF3C1-205ENST00000564747 GPATCH8Q9UKJ3 1502 aaKnown RBP21.28■■□□□ 1
GTF3C1-205ENST00000564747 EIF4G3O43432 1585 aaKnown RBP21.28■■□□□ 1
GTF3C1-205ENST00000564747 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
GTF3C1-205ENST00000564747 FBLN2P98095 1184 aa21.25■□□□□ 0.99
GTF3C1-205ENST00000564747 ZNF326Q5BKZ1 582 aaKnown RBP21.25■□□□□ 0.99
GTF3C1-205ENST00000564747 PKD2Q13563 968 aa21.25■□□□□ 0.99
GTF3C1-205ENST00000564747 KIF14Q15058 1648 aa21.23■□□□□ 0.99
GTF3C1-205ENST00000564747 ZBED9Q6R2W3 1325 aa21.23■□□□□ 0.99
GTF3C1-205ENST00000564747 CNGB1Q14028 1251 aaPredicted RBP21.22■□□□□ 0.99
GTF3C1-205ENST00000564747 KIAA1107Q9UPP5 1409 aa21.22■□□□□ 0.99
GTF3C1-205ENST00000564747 CEP170Q5SW79 1584 aa21.21■□□□□ 0.99
GTF3C1-205ENST00000564747 POLR1AO95602 1720 aaPredicted RBP21.2■□□□□ 0.99
GTF3C1-205ENST00000564747 POLR3GLQ9BT43 218 aa21.2■□□□□ 0.98
GTF3C1-205ENST00000564747 ITSN2Q9NZM3 1697 aa21.2■□□□□ 0.98
GTF3C1-205ENST00000564747 ERICH6BQ5W0A0 696 aa21.2■□□□□ 0.98
GTF3C1-205ENST00000564747 ADGRL2O95490 1459 aa21.19■□□□□ 0.98
GTF3C1-205ENST00000564747 JPH4Q96JJ6 628 aa21.19■□□□□ 0.98
GTF3C1-205ENST00000564747 PPP4R2Q9NY27 417 aa21.19■□□□□ 0.98
GTF3C1-205ENST00000564747 MBD5Q9P267 1494 aa21.19■□□□□ 0.98
GTF3C1-205ENST00000564747 ANKRD30AQ9BXX3 1397 aa21.19■□□□□ 0.98
GTF3C1-205ENST00000564747 ADGBQ8N7X0 1667 aa21.19■□□□□ 0.98
GTF3C1-205ENST00000564747 USP47Q96K76 1375 aa21.18■□□□□ 0.98
GTF3C1-205ENST00000564747 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
GTF3C1-205ENST00000564747 DHX29Q7Z478 1369 aaKnown RBP21.17■□□□□ 0.98
GTF3C1-205ENST00000564747 ANKRD50Q9ULJ7 1429 aa21.16■□□□□ 0.98
GTF3C1-205ENST00000564747 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
GTF3C1-205ENST00000564747 ADCY10Q96PN6 1610 aa21.15■□□□□ 0.98
GTF3C1-205ENST00000564747 BCORL1Q5H9F3 1711 aa21.15■□□□□ 0.98
GTF3C1-205ENST00000564747 CARMIL2Q6F5E8 1435 aa21.14■□□□□ 0.98
GTF3C1-205ENST00000564747 MSH5O43196 834 aa21.14■□□□□ 0.97
GTF3C1-205ENST00000564747 CROCC2H7BZ55 1655 aa21.14■□□□□ 0.97
GTF3C1-205ENST00000564747 PLEKHD1A6NEE1 506 aa21.14■□□□□ 0.97
GTF3C1-205ENST00000564747 BCL11AQ9H165 835 aa21.14■□□□□ 0.97
GTF3C1-205ENST00000564747 NUP155O75694 1391 aa21.12■□□□□ 0.97
GTF3C1-205ENST00000564747 ERCC6Q03468 1493 aa21.11■□□□□ 0.97
GTF3C1-205ENST00000564747 B4GALNT3Q6L9W6 998 aa21.11■□□□□ 0.97
GTF3C1-205ENST00000564747 KDM5CP41229 1560 aa21.08■□□□□ 0.96
GTF3C1-205ENST00000564747 NUP160Q12769 1436 aa21.08■□□□□ 0.96
GTF3C1-205ENST00000564747 C9orf84Q5VXU9 1444 aa21.07■□□□□ 0.96
GTF3C1-205ENST00000564747 CARD11Q9BXL7 1154 aa21.07■□□□□ 0.96
GTF3C1-205ENST00000564747 FANCIQ9NVI1 1328 aa21.06■□□□□ 0.96
GTF3C1-205ENST00000564747 CDC42BPAQ5VT25 1732 aa21.06■□□□□ 0.96
GTF3C1-205ENST00000564747 KDM2AQ9Y2K7 1162 aa21.06■□□□□ 0.96
GTF3C1-205ENST00000564747 ATP10BO94823 1461 aa21.06■□□□□ 0.96
GTF3C1-205ENST00000564747 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
GTF3C1-205ENST00000564747 TSPY4P0CV99 314 aa21.06■□□□□ 0.96
GTF3C1-205ENST00000564747 TSPY10P0CW01 314 aa21.06■□□□□ 0.96
GTF3C1-205ENST00000564747 ARID4BQ4LE39 1312 aaPredicted RBP21.05■□□□□ 0.96
GTF3C1-205ENST00000564747 UHRF1BP1Q6BDS2 1440 aa21.05■□□□□ 0.96
GTF3C1-205ENST00000564747 SENP3-EIF4A1A0A087X0R7 540 aa21.05■□□□□ 0.96
GTF3C1-205ENST00000564747 HNRNPMP52272 730 aaKnown RBP eCLIP21.05■□□□□ 0.96
GTF3C1-205ENST00000564747 ABCA8O94911 1581 aa21.02■□□□□ 0.96
GTF3C1-205ENST00000564747 RALGAPBQ86X10 1494 aa21.02■□□□□ 0.96
GTF3C1-205ENST00000564747 SMG6Q86US8 1419 aaKnown RBP21.02■□□□□ 0.95
GTF3C1-205ENST00000564747 SHANK2Q9UPX8 1470 aa21.01■□□□□ 0.95
GTF3C1-205ENST00000564747 ST20-MTHFSA0A0A6YYL1 179 aa21.01■□□□□ 0.95
GTF3C1-205ENST00000564747 DCAF11Q8TEB1 546 aa21■□□□□ 0.95
GTF3C1-205ENST00000564747 PNISRQ8TF01 805 aaKnown RBP21■□□□□ 0.95
GTF3C1-205ENST00000564747 KIF15Q9NS87 1388 aa21■□□□□ 0.95
GTF3C1-205ENST00000564747 NUDCQ9Y266 331 aa20.99■□□□□ 0.95
GTF3C1-205ENST00000564747 TMC1Q8TDI8 760 aa20.98■□□□□ 0.95
GTF3C1-205ENST00000564747 ROCK2O75116 1388 aaKnown RBP20.98■□□□□ 0.95
GTF3C1-205ENST00000564747 ARHGEF12Q9NZN5 1544 aa20.96■□□□□ 0.95
GTF3C1-205ENST00000564747 KDM5DQ9BY66 1539 aa20.95■□□□□ 0.94
GTF3C1-205ENST00000564747 PTPRGP23470 1445 aa20.93■□□□□ 0.94
GTF3C1-205ENST00000564747 ERICH6Q7L0X2 663 aa20.92■□□□□ 0.94
GTF3C1-205ENST00000564747 RNF123Q5XPI4 1314 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms