RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, human

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYLD-208	ENST00000564634	MAGI2	Q86UL8	1455 aa		41.42	■■■■■ 4.22
CYLD-208	ENST00000564634	ATP1B4	Q9UN42	357 aa	Predicted RBP	41.42	■■■■■ 4.22
CYLD-208	ENST00000564634	HSPA2	P54652	639 aa		41.39	■■■■■ 4.22
CYLD-208	ENST00000564634	MLEC	Q14165	292 aa		41.39	■■■■■ 4.22
CYLD-208	ENST00000564634	UBTF	P17480	764 aa	Known RBP	41.37	■■■■■ 4.21
CYLD-208	ENST00000564634	FER1L4	A9Z1Z3	1794 aa		41.37	■■■■■ 4.21
CYLD-208	ENST00000564634	MYO5C	Q9NQX4	1742 aa		41.36	■■■■■ 4.21
CYLD-208	ENST00000564634	FMN1	Q68DA7	1419 aa		41.35	■■■■■ 4.21
CYLD-208	ENST00000564634	ARHGAP35	Q9NRY4	1499 aa		41.34	■■■■■ 4.21
CYLD-208	ENST00000564634	KIF14	Q15058	1648 aa		41.33	■■■■■ 4.21
CYLD-208	ENST00000564634	ATP10A	O60312	1499 aa		41.24	■■■■■ 4.19
CYLD-208	ENST00000564634	EFCAB2	Q5VUJ9	269 aa		41.24	■■■■■ 4.19
CYLD-208	ENST00000564634	C9orf84	Q5VXU9	1444 aa		41.24	■■■■■ 4.19
CYLD-208	ENST00000564634	ARHGEF12	Q9NZN5	1544 aa		41.21	■■■■■ 4.19
CYLD-208	ENST00000564634	CDK11A	Q9UQ88	783 aa	Predicted RBP	41.2	■■■■■ 4.19
CYLD-208	ENST00000564634	ARHGAP5	Q13017	1502 aa		41.19	■■■■■ 4.18
CYLD-208	ENST00000564634	TRO	Q12816	1431 aa	Predicted RBP	41.18	■■■■■ 4.18
CYLD-208	ENST00000564634	LRRIQ1	Q96JM4	1722 aa		41.16	■■■■■ 4.18
CYLD-208	ENST00000564634	ZNF518A	Q6AHZ1	1483 aa		41.15	■■■■■ 4.18
CYLD-208	ENST00000564634	CLIP1	P30622	1438 aa		41.12	■■■■■ 4.17
CYLD-208	ENST00000564634	KDM5C	P41229	1560 aa		41.1	■■■■■ 4.17
CYLD-208	ENST00000564634	PREX1	Q8TCU6	1659 aa		41.08	■■■■■ 4.17
CYLD-208	ENST00000564634	AFAP1	Q8N556	730 aa		41.06	■■■■■ 4.16
CYLD-208	ENST00000564634	CEBPA	P49715	358 aa	Predicted RBP	41.05	■■■■■ 4.16
CYLD-208	ENST00000564634	MYT1L	Q9UL68	1186 aa		41.04	■■■■■ 4.16
CYLD-208	ENST00000564634	DIP2C	Q9Y2E4	1556 aa		41.03	■■■■■ 4.16
CYLD-208	ENST00000564634	CDC42BPB	Q9Y5S2	1711 aa		41.01	■■■■■ 4.16
CYLD-208	ENST00000564634	ABCA6	Q8N139	1617 aa		40.98	■■■■■ 4.15
CYLD-208	ENST00000564634	CERK	Q8TCT0	537 aa		40.97	■■■■■ 4.15
CYLD-208	ENST00000564634	PREX2	Q70Z35	1606 aa		40.96	■■■■■ 4.15
CYLD-208	ENST00000564634	ABCC1	P33527	1531 aa		40.93	■■■■■ 4.14
CYLD-208	ENST00000564634	RERE	Q9P2R6	1566 aa		40.91	■■■■■ 4.14
CYLD-208	ENST00000564634	TRAPPC8	Q9Y2L5	1435 aa		40.89	■■■■■ 4.14
CYLD-208	ENST00000564634	CCDC18	Q5T9S5	1454 aa		40.89	■■■■■ 4.14
CYLD-208	ENST00000564634	ITSN2	Q9NZM3	1697 aa		40.88	■■■■■ 4.14
CYLD-208	ENST00000564634	MLH3	Q9UHC1	1453 aa		40.88	■■■■■ 4.13
CYLD-208	ENST00000564634	UHRF1BP1	Q6BDS2	1440 aa		40.87	■■■■■ 4.13
CYLD-208	ENST00000564634	CASKIN1	Q8WXD9	1431 aa		40.87	■■■■■ 4.13
CYLD-208	ENST00000564634	STRC	Q7RTU9	1775 aa		40.84	■■■■■ 4.13
CYLD-208	ENST00000564634	C3	P01024	1663 aa		40.83	■■■■■ 4.13
CYLD-208	ENST00000564634	CDC42BPA	Q5VT25	1732 aa		40.79	■■■■■ 4.12
CYLD-208	ENST00000564634	AGL	P35573	1532 aa		40.77	■■■■■ 4.12
CYLD-208	ENST00000564634	KIDINS220	Q9ULH0	1771 aa		40.76	■■■■■ 4.12
CYLD-208	ENST00000564634	SETD1B	Q9UPS6	1966 aa	Known RBP	40.72	■■■■■ 4.11
CYLD-208	ENST00000564634	ESF1	Q9H501	851 aa	Known RBP	40.72	■■■■■ 4.11
CYLD-208	ENST00000564634	FYCO1	Q9BQS8	1478 aa		40.71	■■■■■ 4.11
CYLD-208	ENST00000564634	DMRT2	Q9Y5R5	561 aa		40.69	■■■■■ 4.1
CYLD-208	ENST00000564634	SAMD9L	Q8IVG5	1584 aa		40.66	■■■■■ 4.1
CYLD-208	ENST00000564634	ZNF777	Q9ULD5	760 aa	Predicted RBP	40.65	■■■■■ 4.1
CYLD-208	ENST00000564634	SYCP2	Q9BX26	1530 aa		40.64	■■■■■ 4.1
CYLD-208	ENST00000564634	CNTLN	Q9NXG0	1405 aa		40.59	■■■■■ 4.09
CYLD-208	ENST00000564634	PTPRT	O14522	1441 aa		40.56	■■■■■ 4.08
CYLD-208	ENST00000564634	GPATCH8	Q9UKJ3	1502 aa	Known RBP	40.56	■■■■■ 4.08
CYLD-208	ENST00000564634	SUPT6H	Q7KZ85	1726 aa	Known RBP	40.53	■■■■■ 4.08
CYLD-208	ENST00000564634	SPAG9	O60271	1321 aa	Known RBP	40.52	■■■■■ 4.08
CYLD-208	ENST00000564634	HNRNPM	P52272	730 aa	Known RBP eCLIP	40.51	■■■■■ 4.08
CYLD-208	ENST00000564634	MROH2A	A6NES4	1674 aa		40.5	■■■■■ 4.07
CYLD-208	ENST00000564634	NCOA1	Q15788	1441 aa		40.49	■■■■■ 4.07
CYLD-208	ENST00000564634	ATP7A	Q04656	1500 aa		40.48	■■■■■ 4.07
CYLD-208	ENST00000564634	INO80	Q9ULG1	1556 aa	Predicted RBP	40.44	■■■■■ 4.06
CYLD-208	ENST00000564634	LOC105371045	A0A1W2PR82	267 aa		40.44	■■■■■ 4.06
CYLD-208	ENST00000564634	NPAT	Q14207	1427 aa		40.43	■■■■■ 4.06
CYLD-208	ENST00000564634	CAMSAP1	Q5T5Y3	1602 aa		40.42	■■■■■ 4.06
CYLD-208	ENST00000564634	LTBP4	Q8N2S1	1624 aa		40.42	■■■■■ 4.06
CYLD-208	ENST00000564634	CLTC	Q00610	1675 aa	Known RBP	40.41	■■■■■ 4.06
CYLD-208	ENST00000564634	PLXNC1	O60486	1568 aa		40.41	■■■■■ 4.06
CYLD-208	ENST00000564634	ZMYM3	Q14202	1370 aa		40.4	■■■■■ 4.06
CYLD-208	ENST00000564634	CCNB3	Q8WWL7	1395 aa		40.4	■■■■■ 4.06
CYLD-208	ENST00000564634	CFDP1	Q9UEE9	299 aa	Predicted RBP	40.4	■■■■■ 4.06
CYLD-208	ENST00000564634	PLEKHH2	Q8IVE3	1493 aa		40.39	■■■■■ 4.06
CYLD-208	ENST00000564634	KIAA1107	Q9UPP5	1409 aa		40.39	■■■■■ 4.06
CYLD-208	ENST00000564634	A2M	P01023	1474 aa		40.38	■■■■■ 4.05
CYLD-208	ENST00000564634	DISP3	Q9P2K9	1392 aa		40.37	■■■■■ 4.05
CYLD-208	ENST00000564634	CEP162	Q5TB80	1403 aa		40.36	■■■■■ 4.05
CYLD-208	ENST00000564634	MTUS2	Q5JR59	1369 aa		40.35	■■■■■ 4.05
CYLD-208	ENST00000564634	MYO3A	Q8NEV4	1616 aa		40.33	■■■■■ 4.05
CYLD-208	ENST00000564634	ZNF142	P52746	1687 aa	Predicted RBP	40.27	■■■■■ 4.04
CYLD-208	ENST00000564634	TIAM1	Q13009	1591 aa		40.27	■■■■■ 4.04
CYLD-208	ENST00000564634	NCKAP5L	Q9HCH0	1330 aa		40.26	■■■■■ 4.04
CYLD-208	ENST00000564634	GGT6	Q6P531	493 aa		40.26	■■■■■ 4.04
CYLD-208	ENST00000564634	ADGB	Q8N7X0	1667 aa		40.25	■■■■■ 4.03
CYLD-208	ENST00000564634	ILDR2	Q71H61	639 aa		40.24	■■■■■ 4.03
CYLD-208	ENST00000564634	IQSEC2	Q5JU85	1478 aa		40.24	■■■■■ 4.03
CYLD-208	ENST00000564634	PTPRK	Q15262	1439 aa		40.24	■■■■■ 4.03
CYLD-208	ENST00000564634	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	40.23	■■■■■ 4.03
CYLD-208	ENST00000564634	ZNF644	Q9H582	1327 aa	Predicted RBP	40.23	■■■■■ 4.03
CYLD-208	ENST00000564634	SPATA31D1	Q6ZQQ2	1576 aa		40.22	■■■■■ 4.03
CYLD-208	ENST00000564634	EHBP1L1	Q8N3D4	1523 aa		40.21	■■■■■ 4.03
CYLD-208	ENST00000564634	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	40.16	■■■■■ 4.02
CYLD-208	ENST00000564634	PLA2R1	Q13018	1463 aa		40.16	■■■■■ 4.02
CYLD-208	ENST00000564634	MBD5	Q9P267	1494 aa		40.14	■■■■■ 4.02
CYLD-208	ENST00000564634	TCOF1	Q13428	1488 aa	Known RBP	40.11	■■■■■ 4.01
CYLD-208	ENST00000564634	PKD2	Q13563	968 aa		40.09	■■■■■ 4.01
CYLD-208	ENST00000564634	PPP6R1	Q9UPN7	881 aa		40.04	■■■■■ 4
CYLD-208	ENST00000564634	RTEL1-TNFRSF6B	F6WH68	1400 aa		40.04	■■■■■ 4
CYLD-208	ENST00000564634	A2ML1	A8K2U0	1454 aa		40.01	■■■■■ 4
CYLD-208	ENST00000564634	DHX29	Q7Z478	1369 aa	Known RBP	40	■■■■□ 3.99
CYLD-208	ENST00000564634	DNMT1	P26358	1616 aa	Known RBP	40	■■■■□ 3.99
CYLD-208	ENST00000564634	UBAP1L	F5GYI3	381 aa		39.99	■■■■□ 3.99
CYLD-208	ENST00000564634	SOCS7	O14512	581 aa		39.99	■■■■□ 3.99

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms