RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 CDC42BPAQ5VT25 1732 aa23.04■■□□□ 1.28
COMMD4-210ENST00000564587 DNMT1P26358 1616 aaKnown RBP23.02■■□□□ 1.28
COMMD4-210ENST00000564587 PTPRKQ15262 1439 aa23.01■■□□□ 1.27
COMMD4-210ENST00000564587 CAMSAP2Q08AD1 1489 aa23.01■■□□□ 1.27
COMMD4-210ENST00000564587 DHX57Q6P158 1386 aaKnown RBP23.01■■□□□ 1.27
COMMD4-210ENST00000564587 DAPK1P53355 1430 aa22.99■■□□□ 1.27
COMMD4-210ENST00000564587 ROCK1Q13464 1354 aa22.99■■□□□ 1.27
COMMD4-210ENST00000564587 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
COMMD4-210ENST00000564587 ABCC5O15440 1437 aa22.95■■□□□ 1.26
COMMD4-210ENST00000564587 NPM1P06748 294 aaKnown RBP eCLIP22.95■■□□□ 1.26
COMMD4-210ENST00000564587 NAIPQ13075 1403 aa22.95■■□□□ 1.26
COMMD4-210ENST00000564587 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.95■■□□□ 1.26
COMMD4-210ENST00000564587 GCC2Q8IWJ2 1684 aa22.93■■□□□ 1.26
COMMD4-210ENST00000564587 RSPH4AQ5TD94 716 aa22.93■■□□□ 1.26
COMMD4-210ENST00000564587 WDR7Q9Y4E6 1490 aa22.92■■□□□ 1.26
COMMD4-210ENST00000564587 ZNF644Q9H582 1327 aaPredicted RBP22.92■■□□□ 1.26
COMMD4-210ENST00000564587 MYO5CQ9NQX4 1742 aa22.92■■□□□ 1.26
COMMD4-210ENST00000564587 ZNF777Q9ULD5 760 aaPredicted RBP22.91■■□□□ 1.26
COMMD4-210ENST00000564587 PLEKHH2Q8IVE3 1493 aa22.91■■□□□ 1.26
COMMD4-210ENST00000564587 CDC42BPBQ9Y5S2 1711 aa22.91■■□□□ 1.26
COMMD4-210ENST00000564587 TTC37Q6PGP7 1564 aa22.9■■□□□ 1.26
COMMD4-210ENST00000564587 ARHGEF5Q12774 1597 aa22.89■■□□□ 1.26
COMMD4-210ENST00000564587 SHANK2Q9UPX8 1470 aa22.88■■□□□ 1.25
COMMD4-210ENST00000564587 KCNH8Q96L42 1107 aa22.88■■□□□ 1.25
COMMD4-210ENST00000564587 ARAP3Q8WWN8 1544 aa22.87■■□□□ 1.25
COMMD4-210ENST00000564587 CROCC2H7BZ55 1655 aa22.87■■□□□ 1.25
COMMD4-210ENST00000564587 PLCH2O75038 1416 aa22.87■■□□□ 1.25
COMMD4-210ENST00000564587 ARHGAP5Q13017 1502 aa22.87■■□□□ 1.25
COMMD4-210ENST00000564587 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
COMMD4-210ENST00000564587 ADGRL2O95490 1459 aa22.86■■□□□ 1.25
COMMD4-210ENST00000564587 CHIC2Q9UKJ5 165 aa22.86■■□□□ 1.25
COMMD4-210ENST00000564587 KIAA1107Q9UPP5 1409 aa22.84■■□□□ 1.25
COMMD4-210ENST00000564587 RRP7BPQ9NSQ0 103 aa22.84■■□□□ 1.25
COMMD4-210ENST00000564587 ASXL2Q76L83 1435 aa22.83■■□□□ 1.25
COMMD4-210ENST00000564587 TSPY4P0CV99 314 aa22.83■■□□□ 1.25
COMMD4-210ENST00000564587 TSPY10P0CW01 314 aa22.83■■□□□ 1.25
COMMD4-210ENST00000564587 EFCAB2Q5VUJ9 269 aa22.83■■□□□ 1.25
COMMD4-210ENST00000564587 ANKRD30AQ9BXX3 1397 aa22.83■■□□□ 1.25
COMMD4-210ENST00000564587 SAMD9LQ8IVG5 1584 aa22.83■■□□□ 1.25
COMMD4-210ENST00000564587 CCDC141Q6ZP82 1450 aa22.8■■□□□ 1.24
COMMD4-210ENST00000564587 ABCA9Q8IUA7 1624 aa22.8■■□□□ 1.24
COMMD4-210ENST00000564587 NCOA1Q15788 1441 aa22.8■■□□□ 1.24
COMMD4-210ENST00000564587 MBD5Q9P267 1494 aa22.79■■□□□ 1.24
COMMD4-210ENST00000564587 C9orf84Q5VXU9 1444 aa22.77■■□□□ 1.24
COMMD4-210ENST00000564587 MAPKBP1O60336 1514 aa22.75■■□□□ 1.23
COMMD4-210ENST00000564587 HNRNPMP52272 730 aaKnown RBP eCLIP22.74■■□□□ 1.23
COMMD4-210ENST00000564587 MAST1Q9Y2H9 1570 aa22.74■■□□□ 1.23
COMMD4-210ENST00000564587 SYCP2Q9BX26 1530 aa22.72■■□□□ 1.23
COMMD4-210ENST00000564587 TIMELESSQ9UNS1 1208 aa22.71■■□□□ 1.23
COMMD4-210ENST00000564587 ABCC1P33527 1531 aa22.69■■□□□ 1.22
COMMD4-210ENST00000564587 TRIM52Q96A61 297 aa22.68■■□□□ 1.22
COMMD4-210ENST00000564587 ANKRD50Q9ULJ7 1429 aa22.66■■□□□ 1.22
COMMD4-210ENST00000564587 KDM6BO15054 1643 aa22.66■■□□□ 1.22
COMMD4-210ENST00000564587 FANCAO15360 1455 aa22.65■■□□□ 1.22
COMMD4-210ENST00000564587 CFAP74Q9C0B2 1584 aa22.63■■□□□ 1.21
COMMD4-210ENST00000564587 PLXNC1O60486 1568 aa22.63■■□□□ 1.21
COMMD4-210ENST00000564587 KIF15Q9NS87 1388 aa22.63■■□□□ 1.21
COMMD4-210ENST00000564587 ARHGEF12Q9NZN5 1544 aa22.61■■□□□ 1.21
COMMD4-210ENST00000564587 RTEL1-TNFRSF6BF6WH68 1400 aa22.6■■□□□ 1.21
COMMD4-210ENST00000564587 CD109Q6YHK3 1445 aa22.6■■□□□ 1.21
COMMD4-210ENST00000564587 ILDR1Q86SU0 546 aaPredicted RBP22.6■■□□□ 1.21
COMMD4-210ENST00000564587 MPHOSPH9Q99550 1183 aa22.6■■□□□ 1.21
COMMD4-210ENST00000564587 GLI2P10070 1586 aa22.56■■□□□ 1.2
COMMD4-210ENST00000564587 ADGRL1O94910 1474 aa22.56■■□□□ 1.2
COMMD4-210ENST00000564587 DUOX2Q9NRD8 1548 aa22.55■■□□□ 1.2
COMMD4-210ENST00000564587 TRAPPC8Q9Y2L5 1435 aa22.55■■□□□ 1.2
COMMD4-210ENST00000564587 SPAG9O60271 1321 aaKnown RBP22.54■■□□□ 1.2
COMMD4-210ENST00000564587 KDM5DQ9BY66 1539 aa22.53■■□□□ 1.2
COMMD4-210ENST00000564587 SCAPERQ9BY12 1400 aa22.52■■□□□ 1.2
COMMD4-210ENST00000564587 SLC4A1APQ9BWU0 796 aaKnown RBP22.52■■□□□ 1.2
COMMD4-210ENST00000564587 NEO1Q92859 1461 aa22.52■■□□□ 1.2
COMMD4-210ENST00000564587 ERBINQ96RT1 1412 aa22.51■■□□□ 1.19
COMMD4-210ENST00000564587 SIN3AQ96ST3 1273 aa22.5■■□□□ 1.19
COMMD4-210ENST00000564587 DENND4BO75064 1496 aaPredicted RBP22.49■■□□□ 1.19
COMMD4-210ENST00000564587 PZPP20742 1482 aa22.49■■□□□ 1.19
COMMD4-210ENST00000564587 NEUROD1Q13562 356 aa22.49■■□□□ 1.19
COMMD4-210ENST00000564587 MAP3K4Q9Y6R4 1608 aa22.47■■□□□ 1.19
COMMD4-210ENST00000564587 NUP155O75694 1391 aa22.47■■□□□ 1.19
COMMD4-210ENST00000564587 TONSLQ96HA7 1378 aa22.47■■□□□ 1.19
COMMD4-210ENST00000564587 ZNF518AQ6AHZ1 1483 aa22.47■■□□□ 1.19
COMMD4-210ENST00000564587 ZFYVE16Q7Z3T8 1539 aa22.47■■□□□ 1.19
COMMD4-210ENST00000564587 AFAP1Q8N556 730 aa22.45■■□□□ 1.18
COMMD4-210ENST00000564587 INO80Q9ULG1 1556 aaPredicted RBP22.45■■□□□ 1.18
COMMD4-210ENST00000564587 UNC13BO14795 1591 aa22.44■■□□□ 1.18
COMMD4-210ENST00000564587 ATP7AQ04656 1500 aa22.44■■□□□ 1.18
COMMD4-210ENST00000564587 ANKRD30BQ9BXX2 1392 aa22.44■■□□□ 1.18
COMMD4-210ENST00000564587 ZNF316A6NFI3 1004 aaPredicted RBP22.43■■□□□ 1.18
COMMD4-210ENST00000564587 DIP2BQ9P265 1576 aa22.4■■□□□ 1.18
COMMD4-210ENST00000564587 POGZQ7Z3K3 1410 aa22.4■■□□□ 1.18
COMMD4-210ENST00000564587 KDM5CP41229 1560 aa22.38■■□□□ 1.17
COMMD4-210ENST00000564587 PPP1R15AO75807 674 aaPredicted RBP22.38■■□□□ 1.17
COMMD4-210ENST00000564587 PKD2Q13563 968 aa22.38■■□□□ 1.17
COMMD4-210ENST00000564587 MAGI2Q86UL8 1455 aa22.37■■□□□ 1.17
COMMD4-210ENST00000564587 MLH3Q9UHC1 1453 aa22.37■■□□□ 1.17
COMMD4-210ENST00000564587 RPRD2Q5VT52 1461 aaKnown RBP22.36■■□□□ 1.17
COMMD4-210ENST00000564587 FAM69CQ0P6D2 419 aa22.36■■□□□ 1.17
COMMD4-210ENST00000564587 FAM135AQ9P2D6 1515 aa22.36■■□□□ 1.17
COMMD4-210ENST00000564587 IQGAP3Q86VI3 1631 aa22.35■■□□□ 1.17
COMMD4-210ENST00000564587 MYT1LQ9UL68 1186 aa22.35■■□□□ 1.17
COMMD4-210ENST00000564587 DHX29Q7Z478 1369 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms