RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 CYB5RLQ6IPT4 315 aa15.89■□□□□ 0.13
TCF4-222ENST00000564228 CCNB3Q8WWL7 1395 aa15.89■□□□□ 0.13
TCF4-222ENST00000564228 MYOM3Q5VTT5 1437 aa15.88■□□□□ 0.13
TCF4-222ENST00000564228 FGD6Q6ZV73 1430 aa15.86■□□□□ 0.13
TCF4-222ENST00000564228 FAM50AQ14320 339 aaKnown RBP15.86■□□□□ 0.13
TCF4-222ENST00000564228 ITSN2Q9NZM3 1697 aa15.85■□□□□ 0.13
TCF4-222ENST00000564228 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
TCF4-222ENST00000564228 CDC42BPAQ5VT25 1732 aa15.84■□□□□ 0.13
TCF4-222ENST00000564228 KCNH8Q96L42 1107 aa15.84■□□□□ 0.13
TCF4-222ENST00000564228 PTPN23Q9H3S7 1636 aa15.83■□□□□ 0.12
TCF4-222ENST00000564228 ITGAEP38570 1179 aa15.82■□□□□ 0.12
TCF4-222ENST00000564228 TTC37Q6PGP7 1564 aa15.81■□□□□ 0.12
TCF4-222ENST00000564228 ABCC10Q5T3U5 1492 aa15.81■□□□□ 0.12
TCF4-222ENST00000564228 WDR7Q9Y4E6 1490 aa15.81■□□□□ 0.12
TCF4-222ENST00000564228 ASXL2Q76L83 1435 aa15.8■□□□□ 0.12
TCF4-222ENST00000564228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.79■□□□□ 0.12
TCF4-222ENST00000564228 GPATCH8Q9UKJ3 1502 aaKnown RBP15.79■□□□□ 0.12
TCF4-222ENST00000564228 MYO5CQ9NQX4 1742 aa15.78■□□□□ 0.12
TCF4-222ENST00000564228 MIA2Q96PC5 1412 aa15.78■□□□□ 0.12
TCF4-222ENST00000564228 CDC42BPBQ9Y5S2 1711 aa15.77■□□□□ 0.12
TCF4-222ENST00000564228 PREX2Q70Z35 1606 aa15.77■□□□□ 0.11
TCF4-222ENST00000564228 CFDP1Q9UEE9 299 aaPredicted RBP15.76■□□□□ 0.11
TCF4-222ENST00000564228 ZNF777Q9ULD5 760 aaPredicted RBP15.75■□□□□ 0.11
TCF4-222ENST00000564228 TCOF1Q13428 1488 aaKnown RBP15.75■□□□□ 0.11
TCF4-222ENST00000564228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.11
TCF4-222ENST00000564228 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
TCF4-222ENST00000564228 CAMSAP2Q08AD1 1489 aa15.73■□□□□ 0.11
TCF4-222ENST00000564228 ARHGAP5Q13017 1502 aa15.72■□□□□ 0.11
TCF4-222ENST00000564228 MAPKBP1O60336 1514 aa15.71■□□□□ 0.11
TCF4-222ENST00000564228 ABCA9Q8IUA7 1624 aa15.71■□□□□ 0.11
TCF4-222ENST00000564228 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
TCF4-222ENST00000564228 DHX57Q6P158 1386 aaKnown RBP15.69■□□□□ 0.1
TCF4-222ENST00000564228 DNMT1P26358 1616 aaKnown RBP15.68■□□□□ 0.1
TCF4-222ENST00000564228 SAMD9LQ8IVG5 1584 aa15.68■□□□□ 0.1
TCF4-222ENST00000564228 PLCH2O75038 1416 aa15.67■□□□□ 0.1
TCF4-222ENST00000564228 PTPRKQ15262 1439 aa15.66■□□□□ 0.1
TCF4-222ENST00000564228 RBM19Q9Y4C8 960 aaKnown RBP15.66■□□□□ 0.1
TCF4-222ENST00000564228 DAPK1P53355 1430 aa15.65■□□□□ 0.1
TCF4-222ENST00000564228 CROCC2H7BZ55 1655 aa15.64■□□□□ 0.09
TCF4-222ENST00000564228 CHIC2Q9UKJ5 165 aa15.64■□□□□ 0.09
TCF4-222ENST00000564228 SYCP2Q9BX26 1530 aa15.62■□□□□ 0.09
TCF4-222ENST00000564228 ABCC5O15440 1437 aa15.62■□□□□ 0.09
TCF4-222ENST00000564228 EFCAB2Q5VUJ9 269 aa15.62■□□□□ 0.09
TCF4-222ENST00000564228 ARAP3Q8WWN8 1544 aa15.62■□□□□ 0.09
TCF4-222ENST00000564228 HNRNPMP52272 730 aaKnown RBP eCLIP15.61■□□□□ 0.097e-6■■■□□ 17
TCF4-222ENST00000564228 MYT1LQ9UL68 1186 aa15.61■□□□□ 0.09
TCF4-222ENST00000564228 FANCAO15360 1455 aa15.61■□□□□ 0.09
TCF4-222ENST00000564228 CD109Q6YHK3 1445 aa15.6■□□□□ 0.09
TCF4-222ENST00000564228 DIP2BQ9P265 1576 aa15.6■□□□□ 0.09
TCF4-222ENST00000564228 ADGBQ8N7X0 1667 aa15.6■□□□□ 0.09
TCF4-222ENST00000564228 DNAJC5Q9H3Z4 198 aa15.6■□□□□ 0.09
TCF4-222ENST00000564228 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
TCF4-222ENST00000564228 ARHGEF5Q12774 1597 aa15.59■□□□□ 0.09
TCF4-222ENST00000564228 MAP3K4Q9Y6R4 1608 aa15.59■□□□□ 0.09
TCF4-222ENST00000564228 PRKCSHP14314 528 aaPredicted RBP15.58■□□□□ 0.09
TCF4-222ENST00000564228 PLEKHH2Q8IVE3 1493 aa15.58■□□□□ 0.09
TCF4-222ENST00000564228 ABCC1P33527 1531 aa15.58■□□□□ 0.09
TCF4-222ENST00000564228 SETD5Q9C0A6 1442 aa15.58■□□□□ 0.08
TCF4-222ENST00000564228 RRP7BPQ9NSQ0 103 aa15.58■□□□□ 0.08
TCF4-222ENST00000564228 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
TCF4-222ENST00000564228 MBD5Q9P267 1494 aa15.57■□□□□ 0.08
TCF4-222ENST00000564228 FKBP8Q14318 412 aa15.57■□□□□ 0.08
TCF4-222ENST00000564228 KIF13AQ9H1H9 1805 aa15.57■□□□□ 0.08
TCF4-222ENST00000564228 GLI2P10070 1586 aa15.57■□□□□ 0.08
TCF4-222ENST00000564228 RAB3GAP2Q9H2M9 1393 aa15.57■□□□□ 0.08
TCF4-222ENST00000564228 CCDC141Q6ZP82 1450 aa15.57■□□□□ 0.08
TCF4-222ENST00000564228 FAM69CQ0P6D2 419 aa15.56■□□□□ 0.08
TCF4-222ENST00000564228 FANCIQ9NVI1 1328 aa15.56■□□□□ 0.08
TCF4-222ENST00000564228 HFM1A2PYH4 1435 aa15.56■□□□□ 0.08
TCF4-222ENST00000564228 ARHGEF12Q9NZN5 1544 aa15.56■□□□□ 0.08
TCF4-222ENST00000564228 CFAP74Q9C0B2 1584 aa15.55■□□□□ 0.08
TCF4-222ENST00000564228 NEFLP07196 543 aa15.55■□□□□ 0.08
TCF4-222ENST00000564228 AKNAQ7Z591 1439 aa15.55■□□□□ 0.08
TCF4-222ENST00000564228 KIAA1107Q9UPP5 1409 aa15.55■□□□□ 0.08
TCF4-222ENST00000564228 ADGRL1O94910 1474 aa15.54■□□□□ 0.08
TCF4-222ENST00000564228 TSPY4P0CV99 314 aa15.54■□□□□ 0.08
TCF4-222ENST00000564228 TSPY10P0CW01 314 aa15.54■□□□□ 0.08
TCF4-222ENST00000564228 NAIPQ13075 1403 aa15.54■□□□□ 0.08
TCF4-222ENST00000564228 C9orf84Q5VXU9 1444 aa15.54■□□□□ 0.08
TCF4-222ENST00000564228 SHANK2Q9UPX8 1470 aa15.53■□□□□ 0.08
TCF4-222ENST00000564228 ROCK1Q13464 1354 aa15.52■□□□□ 0.08
TCF4-222ENST00000564228 RSPH4AQ5TD94 716 aa15.52■□□□□ 0.07
TCF4-222ENST00000564228 BCANQ96GW7 911 aa15.52■□□□□ 0.07
TCF4-222ENST00000564228 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
TCF4-222ENST00000564228 ADGRL2O95490 1459 aa15.5■□□□□ 0.07
TCF4-222ENST00000564228 SCAPERQ9BY12 1400 aa15.5■□□□□ 0.07
TCF4-222ENST00000564228 ANKRD30AQ9BXX3 1397 aa15.5■□□□□ 0.07
TCF4-222ENST00000564228 ERICH6Q7L0X2 663 aa15.5■□□□□ 0.07
TCF4-222ENST00000564228 NCOA1Q15788 1441 aa15.5■□□□□ 0.07
TCF4-222ENST00000564228 KDM6BO15054 1643 aa15.5■□□□□ 0.07
TCF4-222ENST00000564228 MSH5O43196 834 aa15.49■□□□□ 0.07
TCF4-222ENST00000564228 PPRC1Q5VV67 1664 aaKnown RBP15.49■□□□□ 0.07
TCF4-222ENST00000564228 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
TCF4-222ENST00000564228 MAST1Q9Y2H9 1570 aa15.48■□□□□ 0.07
TCF4-222ENST00000564228 AFAP1Q8N556 730 aa15.48■□□□□ 0.07
TCF4-222ENST00000564228 NEO1Q92859 1461 aa15.47■□□□□ 0.07
TCF4-222ENST00000564228 KIF15Q9NS87 1388 aa15.45■□□□□ 0.06
TCF4-222ENST00000564228 SPAG9O60271 1321 aaKnown RBP15.44■□□□□ 0.06
TCF4-222ENST00000564228 PLXNC1O60486 1568 aa15.44■□□□□ 0.06
TCF4-222ENST00000564228 ZNF518AQ6AHZ1 1483 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms