RNA–Protein interactions for RNA: ENST00000564141.1

SCAMP5-206, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 4

Gene SCAMP5, Length 554 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-206ENST00000564141 C9orf84Q5VXU9 1444 aa29.27■■■□□ 2.28
SCAMP5-206ENST00000564141 ATP10AO60312 1499 aa29.26■■■□□ 2.27
SCAMP5-206ENST00000564141 EEA1Q15075 1411 aa29.26■■■□□ 2.27
SCAMP5-206ENST00000564141 SCAPERQ9BY12 1400 aa29.25■■■□□ 2.27
SCAMP5-206ENST00000564141 CDK13Q14004 1512 aaKnown RBP29.24■■■□□ 2.27
SCAMP5-206ENST00000564141 MYO5CQ9NQX4 1742 aa29.23■■■□□ 2.27
SCAMP5-206ENST00000564141 KDM5CP41229 1560 aa29.2■■■□□ 2.26
SCAMP5-206ENST00000564141 REREQ9P2R6 1566 aa29.18■■■□□ 2.26
SCAMP5-206ENST00000564141 PLPPR3Q6T4P5 718 aa29.16■■■□□ 2.26
SCAMP5-206ENST00000564141 MLECQ14165 292 aa29.15■■■□□ 2.26
SCAMP5-206ENST00000564141 SETD1BQ9UPS6 1966 aaKnown RBP29.15■■■□□ 2.26
SCAMP5-206ENST00000564141 ZNF518AQ6AHZ1 1483 aa29.14■■■□□ 2.26
SCAMP5-206ENST00000564141 DIP2CQ9Y2E4 1556 aa29.1■■■□□ 2.25
SCAMP5-206ENST00000564141 UHRF1BP1Q6BDS2 1440 aa29.1■■■□□ 2.25
SCAMP5-206ENST00000564141 ILDR2Q71H61 639 aa29.09■■■□□ 2.25
SCAMP5-206ENST00000564141 DMRT2Q9Y5R5 561 aa29.09■■■□□ 2.25
SCAMP5-206ENST00000564141 KIF14Q15058 1648 aa29.09■■■□□ 2.25
SCAMP5-206ENST00000564141 SOCS7O14512 581 aa29.07■■■□□ 2.24
SCAMP5-206ENST00000564141 PTPRTO14522 1441 aa29.07■■■□□ 2.24
SCAMP5-206ENST00000564141 C3P01024 1663 aa29.07■■■□□ 2.24
SCAMP5-206ENST00000564141 DISP3Q9P2K9 1392 aa29.07■■■□□ 2.24
SCAMP5-206ENST00000564141 SPATA31D1Q6ZQQ2 1576 aa29.06■■■□□ 2.24
SCAMP5-206ENST00000564141 RANGAP1P46060 587 aaPredicted RBP29.05■■■□□ 2.24
SCAMP5-206ENST00000564141 EFCAB2Q5VUJ9 269 aa29.04■■■□□ 2.24
SCAMP5-206ENST00000564141 ABCA6Q8N139 1617 aa29.03■■■□□ 2.24
SCAMP5-206ENST00000564141 CEBPAP49715 358 aaPredicted RBP29.03■■■□□ 2.24
SCAMP5-206ENST00000564141 IQSEC2Q5JU85 1478 aa29.03■■■□□ 2.24
SCAMP5-206ENST00000564141 LTBP4Q8N2S1 1624 aa29.02■■■□□ 2.24
SCAMP5-206ENST00000564141 AGLP35573 1532 aa29.02■■■□□ 2.24
SCAMP5-206ENST00000564141 FMN1Q68DA7 1419 aa29.01■■■□□ 2.23
SCAMP5-206ENST00000564141 MLH3Q9UHC1 1453 aa28.99■■■□□ 2.23
SCAMP5-206ENST00000564141 ARHGAP5Q13017 1502 aa28.98■■■□□ 2.23
SCAMP5-206ENST00000564141 CDC42BPBQ9Y5S2 1711 aa28.97■■■□□ 2.23
SCAMP5-206ENST00000564141 TROQ12816 1431 aaPredicted RBP28.97■■■□□ 2.23
SCAMP5-206ENST00000564141 LRRIQ1Q96JM4 1722 aa28.96■■■□□ 2.23
SCAMP5-206ENST00000564141 PREX2Q70Z35 1606 aa28.92■■■□□ 2.22
SCAMP5-206ENST00000564141 ABCC1P33527 1531 aa28.92■■■□□ 2.22
SCAMP5-206ENST00000564141 ARHGAP35Q9NRY4 1499 aa28.91■■■□□ 2.22
SCAMP5-206ENST00000564141 ITSN2Q9NZM3 1697 aa28.91■■■□□ 2.22
SCAMP5-206ENST00000564141 AFAP1Q8N556 730 aa28.91■■■□□ 2.22
SCAMP5-206ENST00000564141 NCOA1Q15788 1441 aa28.9■■■□□ 2.22
SCAMP5-206ENST00000564141 TRAPPC8Q9Y2L5 1435 aa28.89■■■□□ 2.22
SCAMP5-206ENST00000564141 CDK11AQ9UQ88 783 aaPredicted RBP28.89■■■□□ 2.22
SCAMP5-206ENST00000564141 MROH2AA6NES4 1674 aa28.88■■■□□ 2.21
SCAMP5-206ENST00000564141 CLIP1P30622 1438 aa28.87■■■□□ 2.21
SCAMP5-206ENST00000564141 KIDINS220Q9ULH0 1771 aa28.87■■■□□ 2.21
SCAMP5-206ENST00000564141 CNTLNQ9NXG0 1405 aa28.86■■■□□ 2.21
SCAMP5-206ENST00000564141 NPATQ14207 1427 aa28.81■■■□□ 2.2
SCAMP5-206ENST00000564141 ZNF142P52746 1687 aaPredicted RBP28.77■■■□□ 2.2
SCAMP5-206ENST00000564141 CAMSAP1Q5T5Y3 1602 aa28.77■■■□□ 2.2
SCAMP5-206ENST00000564141 CDC42BPAQ5VT25 1732 aa28.77■■■□□ 2.2
SCAMP5-206ENST00000564141 SAMD9LQ8IVG5 1584 aa28.71■■■□□ 2.19
SCAMP5-206ENST00000564141 CCDC18Q5T9S5 1454 aa28.71■■■□□ 2.19
SCAMP5-206ENST00000564141 ATP1B4Q9UN42 357 aaPredicted RBP28.7■■■□□ 2.18
SCAMP5-206ENST00000564141 MYO3AQ8NEV4 1616 aa28.69■■■□□ 2.18
SCAMP5-206ENST00000564141 PLA2R1Q13018 1463 aa28.69■■■□□ 2.18
SCAMP5-206ENST00000564141 PLXNC1O60486 1568 aa28.68■■■□□ 2.18
SCAMP5-206ENST00000564141 ESF1Q9H501 851 aaKnown RBP28.68■■■□□ 2.18
SCAMP5-206ENST00000564141 MYT1LQ9UL68 1186 aa28.67■■■□□ 2.18
SCAMP5-206ENST00000564141 TCOF1Q13428 1488 aaKnown RBP28.65■■■□□ 2.18
SCAMP5-206ENST00000564141 CASKIN1Q8WXD9 1431 aa28.64■■■□□ 2.18
SCAMP5-206ENST00000564141 INO80Q9ULG1 1556 aaPredicted RBP28.62■■■□□ 2.17
SCAMP5-206ENST00000564141 CEP170BQ9Y4F5 1589 aaPredicted RBP28.62■■■□□ 2.17
SCAMP5-206ENST00000564141 ZMYM3Q14202 1370 aa28.62■■■□□ 2.17
SCAMP5-206ENST00000564141 CLTCQ00610 1675 aaKnown RBP28.61■■■□□ 2.17
SCAMP5-206ENST00000564141 SUPT6HQ7KZ85 1726 aaKnown RBP28.61■■■□□ 2.17
SCAMP5-206ENST00000564141 SYCP2Q9BX26 1530 aa28.6■■■□□ 2.17
SCAMP5-206ENST00000564141 UBTFP17480 764 aaKnown RBP28.6■■■□□ 2.17
SCAMP5-206ENST00000564141 ATP7AQ04656 1500 aa28.58■■■□□ 2.17
SCAMP5-206ENST00000564141 ZNF335Q9H4Z2 1342 aaPredicted RBP28.57■■■□□ 2.16
SCAMP5-206ENST00000564141 PTPRKQ15262 1439 aa28.56■■■□□ 2.16
SCAMP5-206ENST00000564141 PKD2Q13563 968 aa28.54■■■□□ 2.16
SCAMP5-206ENST00000564141 GPATCH8Q9UKJ3 1502 aaKnown RBP28.52■■■□□ 2.16
SCAMP5-206ENST00000564141 FYCO1Q9BQS8 1478 aa28.52■■■□□ 2.16
SCAMP5-206ENST00000564141 KIAA1107Q9UPP5 1409 aa28.52■■■□□ 2.16
SCAMP5-206ENST00000564141 NCKAP5LQ9HCH0 1330 aa28.51■■■□□ 2.15
SCAMP5-206ENST00000564141 A2MP01023 1474 aa28.49■■■□□ 2.15
SCAMP5-206ENST00000564141 UBAP1LF5GYI3 381 aa28.48■■■□□ 2.15
SCAMP5-206ENST00000564141 ADGBQ8N7X0 1667 aa28.48■■■□□ 2.15
SCAMP5-206ENST00000564141 PLEKHH2Q8IVE3 1493 aa28.47■■■□□ 2.15
SCAMP5-206ENST00000564141 SPAG9O60271 1321 aaKnown RBP28.46■■■□□ 2.15
SCAMP5-206ENST00000564141 DNMT1P26358 1616 aaKnown RBP28.45■■■□□ 2.14
SCAMP5-206ENST00000564141 POLR1AO95602 1720 aaPredicted RBP28.45■■■□□ 2.14
SCAMP5-206ENST00000564141 MED1Q15648 1581 aaPredicted RBP28.44■■■□□ 2.14
SCAMP5-206ENST00000564141 A2ML1A8K2U0 1454 aa28.43■■■□□ 2.14
SCAMP5-206ENST00000564141 NEURL4Q96JN8 1562 aa28.41■■■□□ 2.14
SCAMP5-206ENST00000564141 CPS1P31327 1500 aa28.4■■■□□ 2.14
SCAMP5-206ENST00000564141 EHMT2Q96KQ7 1210 aa28.4■■■□□ 2.14
SCAMP5-206ENST00000564141 PPP6R1Q9UPN7 881 aa28.39■■■□□ 2.14
SCAMP5-206ENST00000564141 HNRNPMP52272 730 aaKnown RBP eCLIP28.36■■■□□ 2.13
SCAMP5-206ENST00000564141 FAM135AQ9P2D6 1515 aa28.36■■■□□ 2.13
SCAMP5-206ENST00000564141 ZNF777Q9ULD5 760 aaPredicted RBP28.34■■■□□ 2.13
SCAMP5-206ENST00000564141 ALKQ9UM73 1620 aa28.29■■■□□ 2.12
SCAMP5-206ENST00000564141 MBD5Q9P267 1494 aa28.28■■■□□ 2.12
SCAMP5-206ENST00000564141 SHANK2Q9UPX8 1470 aa28.28■■■□□ 2.12
SCAMP5-206ENST00000564141 VWDEQ8N2E2 1590 aa28.28■■■□□ 2.12
SCAMP5-206ENST00000564141 RTEL1-TNFRSF6BF6WH68 1400 aa28.27■■■□□ 2.12
SCAMP5-206ENST00000564141 HSPA1LP34931 641 aa28.27■■■□□ 2.12
SCAMP5-206ENST00000564141 GGT6Q6P531 493 aa28.27■■■□□ 2.12
SCAMP5-206ENST00000564141 TIAM1Q13009 1591 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms