RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 PDS5BQ9NTI5 1447 aa15.57■□□□□ 0.08
TUBGCP4-208ENST00000564079 EIF5BO60841 1220 aaKnown RBP15.56■□□□□ 0.08
TUBGCP4-208ENST00000564079 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
TUBGCP4-208ENST00000564079 FRAT2O75474 233 aaPredicted RBP15.54■□□□□ 0.08
TUBGCP4-208ENST00000564079 CARMIL1Q5VZK9 1371 aa15.54■□□□□ 0.08
TUBGCP4-208ENST00000564079 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
TUBGCP4-208ENST00000564079 GORABQ5T7V8 394 aa15.54■□□□□ 0.08
TUBGCP4-208ENST00000564079 SYTL4Q96C24 671 aaPredicted RBP15.54■□□□□ 0.08
TUBGCP4-208ENST00000564079 SIN3AQ96ST3 1273 aa15.54■□□□□ 0.08
TUBGCP4-208ENST00000564079 PRM3Q9NNZ6 103 aa15.53■□□□□ 0.08
TUBGCP4-208ENST00000564079 AMPHP49418 695 aa15.52■□□□□ 0.07
TUBGCP4-208ENST00000564079 FOXD1Q16676 465 aa15.52■□□□□ 0.07
TUBGCP4-208ENST00000564079 PLCB2Q00722 1185 aa15.51■□□□□ 0.07
TUBGCP4-208ENST00000564079 HNRNPMP52272 730 aaKnown RBP eCLIP15.51■□□□□ 0.07
TUBGCP4-208ENST00000564079 BECN1Q14457 450 aa15.51■□□□□ 0.07
TUBGCP4-208ENST00000564079 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.5■□□□□ 0.07
TUBGCP4-208ENST00000564079 GOLGA6L22H0YM25 854 aa15.5■□□□□ 0.07
TUBGCP4-208ENST00000564079 GNL2Q13823 731 aaKnown RBP15.5■□□□□ 0.07
TUBGCP4-208ENST00000564079 RGS3P49796 1198 aa15.49■□□□□ 0.07
TUBGCP4-208ENST00000564079 FAM69CQ0P6D2 419 aa15.48■□□□□ 0.07
TUBGCP4-208ENST00000564079 CEP162Q5TB80 1403 aa15.48■□□□□ 0.07
TUBGCP4-208ENST00000564079 PKD2Q13563 968 aa15.48■□□□□ 0.07
TUBGCP4-208ENST00000564079 PPP1R1BQ9UD71 204 aaPredicted RBP15.47■□□□□ 0.07
TUBGCP4-208ENST00000564079 ACIN1Q9UKV3 1341 aaKnown RBP15.47■□□□□ 0.07
TUBGCP4-208ENST00000564079 SOGA1O94964 1423 aa15.47■□□□□ 0.07
TUBGCP4-208ENST00000564079 PTMAP06454 111 aaKnown RBP15.46■□□□□ 0.07
TUBGCP4-208ENST00000564079 FBXW7Q969H0 707 aa15.46■□□□□ 0.07
TUBGCP4-208ENST00000564079 SPAG9O60271 1321 aaKnown RBP15.45■□□□□ 0.06
TUBGCP4-208ENST00000564079 VPS53Q5VIR6 699 aa15.45■□□□□ 0.06
TUBGCP4-208ENST00000564079 U2AF1L5P0DN76 240 aaPredicted RBP15.44■□□□□ 0.06
TUBGCP4-208ENST00000564079 U2AF1Q01081 240 aaKnown RBP eCLIP15.44■□□□□ 0.06
TUBGCP4-208ENST00000564079 CHMP4BQ9H444 224 aaKnown RBP15.44■□□□□ 0.06
TUBGCP4-208ENST00000564079 KRI1Q8N9T8 703 aaKnown RBP15.43■□□□□ 0.06
TUBGCP4-208ENST00000564079 EEA1Q15075 1411 aa15.42■□□□□ 0.06
TUBGCP4-208ENST00000564079 ANO8Q9HCE9 1232 aaPredicted RBP15.42■□□□□ 0.06
TUBGCP4-208ENST00000564079 RAD21O60216 631 aa15.41■□□□□ 0.06
TUBGCP4-208ENST00000564079 NGEFQ8N5V2 710 aa15.41■□□□□ 0.06
TUBGCP4-208ENST00000564079 CWC22Q9HCG8 908 aaKnown RBP15.4■□□□□ 0.06
TUBGCP4-208ENST00000564079 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
TUBGCP4-208ENST00000564079 HSP90AB1P08238 724 aaKnown RBP15.39■□□□□ 0.05
TUBGCP4-208ENST00000564079 PDE4CQ08493 712 aa15.39■□□□□ 0.05
TUBGCP4-208ENST00000564079 GOLGA6L4A6NEF3 574 aa15.39■□□□□ 0.05
TUBGCP4-208ENST00000564079 TOMM22Q9NS69 142 aa15.38■□□□□ 0.05
TUBGCP4-208ENST00000564079 SF3B2Q13435 895 aaKnown RBP15.38■□□□□ 0.05
TUBGCP4-208ENST00000564079 MS4A1P11836 297 aa15.38■□□□□ 0.05
TUBGCP4-208ENST00000564079 PIP4K2BP78356 416 aa15.37■□□□□ 0.05
TUBGCP4-208ENST00000564079 SLC4A10Q6U841 1118 aa15.37■□□□□ 0.05
TUBGCP4-208ENST00000564079 MIER1Q8N108 512 aa15.37■□□□□ 0.05
TUBGCP4-208ENST00000564079 STK31Q9BXU1 1019 aa15.37■□□□□ 0.05
TUBGCP4-208ENST00000564079 NUP155O75694 1391 aa15.37■□□□□ 0.05
TUBGCP4-208ENST00000564079 FHAD1B1AJZ9 1412 aa15.37■□□□□ 0.05
TUBGCP4-208ENST00000564079 ATF3P18847 181 aa15.37■□□□□ 0.05
TUBGCP4-208ENST00000564079 DCAF1Q9Y4B6 1507 aa15.37■□□□□ 0.05
TUBGCP4-208ENST00000564079 TRAK1Q9UPV9 953 aa15.37■□□□□ 0.05
TUBGCP4-208ENST00000564079 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
TUBGCP4-208ENST00000564079 PSME1Q06323 249 aa15.36■□□□□ 0.05
TUBGCP4-208ENST00000564079 TRIM44Q96DX7 344 aaPredicted RBP15.35■□□□□ 0.05
TUBGCP4-208ENST00000564079 SMARCA2P51531 1590 aa15.35■□□□□ 0.05
TUBGCP4-208ENST00000564079 ROCK2O75116 1388 aaKnown RBP15.35■□□□□ 0.05
TUBGCP4-208ENST00000564079 NUTM2BA6NNL0 878 aaPredicted RBP15.35■□□□□ 0.05
TUBGCP4-208ENST00000564079 NUTM2EB1AL46 878 aaPredicted RBP15.35■□□□□ 0.05
TUBGCP4-208ENST00000564079 NUTM2AQ8IVF1 878 aaPredicted RBP15.35■□□□□ 0.05
TUBGCP4-208ENST00000564079 TERF2IPQ9NYB0 399 aa15.35■□□□□ 0.05
TUBGCP4-208ENST00000564079 DNTTIP2Q5QJE6 756 aaKnown RBP15.35■□□□□ 0.05
TUBGCP4-208ENST00000564079 C1orf141Q5JVX7 400 aa15.34■□□□□ 0.05
TUBGCP4-208ENST00000564079 TRIM34Q9BYJ4 488 aa15.34■□□□□ 0.05
TUBGCP4-208ENST00000564079 KIAA1211Q6ZU35 1233 aa15.34■□□□□ 0.05
TUBGCP4-208ENST00000564079 CTDP1Q9Y5B0 961 aaPredicted RBP15.34■□□□□ 0.05
TUBGCP4-208ENST00000564079 MCCP23508 829 aa15.33■□□□□ 0.04
TUBGCP4-208ENST00000564079 DDRGK1Q96HY6 314 aa15.33■□□□□ 0.04
TUBGCP4-208ENST00000564079 SAMD1Q6SPF0 538 aaPredicted RBP15.32■□□□□ 0.04
TUBGCP4-208ENST00000564079 USP35Q9P2H5 1018 aa15.31■□□□□ 0.04
TUBGCP4-208ENST00000564079 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
TUBGCP4-208ENST00000564079 SUPT16HQ9Y5B9 1047 aaKnown RBP15.3■□□□□ 0.04
TUBGCP4-208ENST00000564079 BAZ1AQ9NRL2 1556 aaPredicted RBP15.3■□□□□ 0.04
TUBGCP4-208ENST00000564079 GOLGA6L6A8MZA4 724 aa15.3■□□□□ 0.04
TUBGCP4-208ENST00000564079 MARCH6O60337 910 aa15.3■□□□□ 0.04
TUBGCP4-208ENST00000564079 ITPRIPQ8IWB1 547 aa15.29■□□□□ 0.04
TUBGCP4-208ENST00000564079 B4GALNT3Q6L9W6 998 aa15.29■□□□□ 0.04
TUBGCP4-208ENST00000564079 CALD1Q05682 793 aaKnown RBP15.28■□□□□ 0.04
TUBGCP4-208ENST00000564079 RASSF8Q8NHQ8 419 aa15.28■□□□□ 0.04
TUBGCP4-208ENST00000564079 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
TUBGCP4-208ENST00000564079 HSP90B1P14625 803 aaKnown RBP15.28■□□□□ 0.04
TUBGCP4-208ENST00000564079 TTC5Q8N0Z6 440 aa15.28■□□□□ 0.04
TUBGCP4-208ENST00000564079 ANKRD30AQ9BXX3 1397 aa15.27■□□□□ 0.04
TUBGCP4-208ENST00000564079 WWC1Q8IX03 1113 aa15.27■□□□□ 0.04
TUBGCP4-208ENST00000564079 ARHGAP35Q9NRY4 1499 aa15.26■□□□□ 0.03
TUBGCP4-208ENST00000564079 MINK1Q8N4C8 1332 aaPredicted RBP15.25■□□□□ 0.03
TUBGCP4-208ENST00000564079 TRIM6-TRIM34B2RNG4 842 aa15.25■□□□□ 0.03
TUBGCP4-208ENST00000564079 NUTM2GQ5VZR2 741 aa15.25■□□□□ 0.03
TUBGCP4-208ENST00000564079 GPATCH3Q96I76 525 aa15.25■□□□□ 0.03
TUBGCP4-208ENST00000564079 EIF3AQ14152 1382 aaKnown RBP15.24■□□□□ 0.03
TUBGCP4-208ENST00000564079 IPO8O15397 1037 aaKnown RBP15.24■□□□□ 0.03
TUBGCP4-208ENST00000564079 ERICH6BQ5W0A0 696 aa15.24■□□□□ 0.03
TUBGCP4-208ENST00000564079 TCEAL9Q9UHQ7 104 aa15.23■□□□□ 0.03
TUBGCP4-208ENST00000564079 NOL10Q9BSC4 688 aaKnown RBP15.23■□□□□ 0.03
TUBGCP4-208ENST00000564079 CREBRFQ8IUR6 639 aa15.23■□□□□ 0.03
TUBGCP4-208ENST00000564079 CCDC146Q8IYE0 955 aa15.23■□□□□ 0.03
TUBGCP4-208ENST00000564079 COG3Q96JB2 828 aa15.22■□□□□ 0.03
TUBGCP4-208ENST00000564079 VPS37DQ86XT2 251 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms