RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 GLI2P10070 1586 aa13.1□□□□□ -0.31
TCF4-221ENST00000563888 ABCC2Q92887 1545 aa13.09□□□□□ -0.31
TCF4-221ENST00000563888 TEX14Q8IWB6 1497 aa13.08□□□□□ -0.32
TCF4-221ENST00000563888 PKD2Q13563 968 aa13.07□□□□□ -0.32
TCF4-221ENST00000563888 KIAA0586Q9BVV6 1533 aa13.07□□□□□ -0.32
TCF4-221ENST00000563888 CERKQ8TCT0 537 aa13.06□□□□□ -0.32
TCF4-221ENST00000563888 EPRSP07814 1512 aaKnown RBP13.05□□□□□ -0.32
TCF4-221ENST00000563888 TNIKQ9UKE5 1360 aa13.04□□□□□ -0.32
TCF4-221ENST00000563888 HSPA2P54652 639 aa13.02□□□□□ -0.33
TCF4-221ENST00000563888 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
TCF4-221ENST00000563888 KCNH8Q96L42 1107 aa13.01□□□□□ -0.33
TCF4-221ENST00000563888 PTPRMP28827 1452 aa13.01□□□□□ -0.33
TCF4-221ENST00000563888 CARMIL2Q6F5E8 1435 aa13□□□□□ -0.33
TCF4-221ENST00000563888 UACAQ9BZF9 1416 aa12.99□□□□□ -0.33
TCF4-221ENST00000563888 MAP3K4Q9Y6R4 1608 aa12.99□□□□□ -0.33
TCF4-221ENST00000563888 ARID4BQ4LE39 1312 aaPredicted RBP12.97□□□□□ -0.33
TCF4-221ENST00000563888 CUL7Q14999 1698 aa12.97□□□□□ -0.33
TCF4-221ENST00000563888 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
TCF4-221ENST00000563888 UHRF1BP1LA0JNW5 1464 aa12.97□□□□□ -0.33
TCF4-221ENST00000563888 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
TCF4-221ENST00000563888 CD109Q6YHK3 1445 aa12.95□□□□□ -0.34
TCF4-221ENST00000563888 KIF21BO75037 1637 aa12.95□□□□□ -0.34
TCF4-221ENST00000563888 BIVM-ERCC5R4GMW8 1640 aa12.95□□□□□ -0.34
TCF4-221ENST00000563888 IGF1RP08069 1367 aa12.94□□□□□ -0.34
TCF4-221ENST00000563888 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
TCF4-221ENST00000563888 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
TCF4-221ENST00000563888 KDM5BQ9UGL1 1544 aa12.92□□□□□ -0.34
TCF4-221ENST00000563888 WDR7Q9Y4E6 1490 aa12.89□□□□□ -0.35
TCF4-221ENST00000563888 RAPGEF3O95398 923 aa12.88□□□□□ -0.35
TCF4-221ENST00000563888 MAGI3Q5TCQ9 1506 aa12.88□□□□□ -0.35
TCF4-221ENST00000563888 HAX1O00165 279 aa12.87□□□□□ -0.35
TCF4-221ENST00000563888 SUPT5HO00267 1087 aaKnown RBP12.87□□□□□ -0.35
TCF4-221ENST00000563888 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
TCF4-221ENST00000563888 ZCCHC11Q5TAX3 1644 aaKnown RBP12.86□□□□□ -0.35
TCF4-221ENST00000563888 CARMIL1Q5VZK9 1371 aa12.85□□□□□ -0.35
TCF4-221ENST00000563888 PLCB2Q00722 1185 aa12.85□□□□□ -0.35
TCF4-221ENST00000563888 ADAMTSL3P82987 1691 aa12.85□□□□□ -0.35
TCF4-221ENST00000563888 DISP1Q96F81 1524 aa12.83□□□□□ -0.35
TCF4-221ENST00000563888 KIF27Q86VH2 1401 aa12.83□□□□□ -0.36
TCF4-221ENST00000563888 ARID3CA6NKF2 412 aa12.82□□□□□ -0.36
TCF4-221ENST00000563888 GSE1Q14687 1217 aa12.82□□□□□ -0.36
TCF4-221ENST00000563888 MADDQ8WXG6 1647 aa12.8□□□□□ -0.36
TCF4-221ENST00000563888 IQGAP2Q13576 1575 aa12.8□□□□□ -0.36
TCF4-221ENST00000563888 ARAP3Q8WWN8 1544 aa12.79□□□□□ -0.36
TCF4-221ENST00000563888 RGL2O15211 777 aa12.79□□□□□ -0.36
TCF4-221ENST00000563888 DCAF8Q5TAQ9 597 aa12.79□□□□□ -0.36
TCF4-221ENST00000563888 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
TCF4-221ENST00000563888 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
TCF4-221ENST00000563888 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
TCF4-221ENST00000563888 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
TCF4-221ENST00000563888 MLECQ14165 292 aa12.77□□□□□ -0.37
TCF4-221ENST00000563888 CFAP43Q8NDM7 1665 aa12.76□□□□□ -0.37
TCF4-221ENST00000563888 BCORL1Q5H9F3 1711 aa12.75□□□□□ -0.37
TCF4-221ENST00000563888 NUBP1P53384 320 aa12.74□□□□□ -0.37
TCF4-221ENST00000563888 HAP1P54257 671 aaPredicted RBP12.74□□□□□ -0.37
TCF4-221ENST00000563888 BBXQ8WY36 941 aaPredicted RBP12.74□□□□□ -0.37
TCF4-221ENST00000563888 RIMS1Q86UR5 1692 aaKnown RBP12.73□□□□□ -0.37
TCF4-221ENST00000563888 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
TCF4-221ENST00000563888 PHLDB1Q86UU1 1377 aa12.71□□□□□ -0.37
TCF4-221ENST00000563888 CEBPAP49715 358 aaPredicted RBP12.69□□□□□ -0.38
TCF4-221ENST00000563888 YEATS2Q9ULM3 1422 aa12.69□□□□□ -0.38
TCF4-221ENST00000563888 UGGT2Q9NYU1 1516 aa12.68□□□□□ -0.38
TCF4-221ENST00000563888 KIAA0556O60303 1618 aa12.68□□□□□ -0.38
TCF4-221ENST00000563888 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
TCF4-221ENST00000563888 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
TCF4-221ENST00000563888 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
TCF4-221ENST00000563888 POGZQ7Z3K3 1410 aa12.67□□□□□ -0.38
TCF4-221ENST00000563888 MNX1P50219 401 aaPredicted RBP12.65□□□□□ -0.38
TCF4-221ENST00000563888 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
TCF4-221ENST00000563888 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
TCF4-221ENST00000563888 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
TCF4-221ENST00000563888 EVX2Q03828 476 aa12.63□□□□□ -0.39
TCF4-221ENST00000563888 FAM9AQ8IZU1 332 aaPredicted RBP12.63□□□□□ -0.39
TCF4-221ENST00000563888 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
TCF4-221ENST00000563888 NEO1Q92859 1461 aa12.63□□□□□ -0.39
TCF4-221ENST00000563888 P3H3Q8IVL6 736 aa12.62□□□□□ -0.39
TCF4-221ENST00000563888 ABCA8O94911 1581 aa12.61□□□□□ -0.39
TCF4-221ENST00000563888 AKNAQ7Z591 1439 aa12.61□□□□□ -0.39
TCF4-221ENST00000563888 FRMPD1Q5SYB0 1578 aa12.6□□□□□ -0.39
TCF4-221ENST00000563888 FANCAO15360 1455 aa12.6□□□□□ -0.39
TCF4-221ENST00000563888 DENND4BO75064 1496 aaPredicted RBP12.59□□□□□ -0.39
TCF4-221ENST00000563888 ATP10BO94823 1461 aa12.59□□□□□ -0.39
TCF4-221ENST00000563888 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
TCF4-221ENST00000563888 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
TCF4-221ENST00000563888 ARHGEF40Q8TER5 1519 aa12.58□□□□□ -0.4
TCF4-221ENST00000563888 SPRYD3Q8NCJ5 442 aa12.58□□□□□ -0.4
TCF4-221ENST00000563888 GOLGA3Q08378 1498 aa12.57□□□□□ -0.4
TCF4-221ENST00000563888 RIOK3O14730 519 aaKnown RBP12.56□□□□□ -0.4
TCF4-221ENST00000563888 ABCA9Q8IUA7 1624 aa12.55□□□□□ -0.4
TCF4-221ENST00000563888 PTPRTO14522 1441 aa12.55□□□□□ -0.4
TCF4-221ENST00000563888 UHRF1BP1Q6BDS2 1440 aa12.55□□□□□ -0.4
TCF4-221ENST00000563888 STRCQ7RTU9 1775 aa12.55□□□□□ -0.4
TCF4-221ENST00000563888 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
TCF4-221ENST00000563888 FHOD3Q2V2M9 1422 aa12.54□□□□□ -0.4
TCF4-221ENST00000563888 LTBP4Q8N2S1 1624 aa12.53□□□□□ -0.4
TCF4-221ENST00000563888 CHRM1P11229 460 aaPredicted RBP12.53□□□□□ -0.4
TCF4-221ENST00000563888 HSPA1LP34931 641 aa12.53□□□□□ -0.4
TCF4-221ENST00000563888 PIP4K2BP78356 416 aa12.52□□□□□ -0.41
TCF4-221ENST00000563888 VSIG10Q8N0Z9 540 aa12.52□□□□□ -0.41
TCF4-221ENST00000563888 RNF25Q96BH1 459 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms