RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 SIGLEC1Q9BZZ2 1709 aa29.99■■■□□ 2.39
SYNGR3-203ENST00000563869 MAGI2Q86UL8 1455 aa29.99■■■□□ 2.39
SYNGR3-203ENST00000563869 YEATS2Q9ULM3 1422 aa29.96■■■□□ 2.39
SYNGR3-203ENST00000563869 FYCO1Q9BQS8 1478 aa29.95■■■□□ 2.39
SYNGR3-203ENST00000563869 CASKIN1Q8WXD9 1431 aa29.95■■■□□ 2.38
SYNGR3-203ENST00000563869 CDK13Q14004 1512 aaKnown RBP29.93■■■□□ 2.38
SYNGR3-203ENST00000563869 FER1L4A9Z1Z3 1794 aa29.9■■■□□ 2.38
SYNGR3-203ENST00000563869 PLCH2O75038 1416 aa29.9■■■□□ 2.38
SYNGR3-203ENST00000563869 CCDC18Q5T9S5 1454 aa29.9■■■□□ 2.38
SYNGR3-203ENST00000563869 HSPA2P54652 639 aa29.89■■■□□ 2.38
SYNGR3-203ENST00000563869 VPS8Q8N3P4 1428 aa29.88■■■□□ 2.37
SYNGR3-203ENST00000563869 SCAPERQ9BY12 1400 aa29.88■■■□□ 2.37
SYNGR3-203ENST00000563869 PLPPR3Q6T4P5 718 aa29.87■■■□□ 2.37
SYNGR3-203ENST00000563869 MYO5CQ9NQX4 1742 aa29.84■■■□□ 2.37
SYNGR3-203ENST00000563869 MLECQ14165 292 aa29.83■■■□□ 2.37
SYNGR3-203ENST00000563869 CDK11AQ9UQ88 783 aaPredicted RBP29.83■■■□□ 2.37
SYNGR3-203ENST00000563869 ATP10AO60312 1499 aa29.8■■■□□ 2.36
SYNGR3-203ENST00000563869 ARHGEF12Q9NZN5 1544 aa29.79■■■□□ 2.36
SYNGR3-203ENST00000563869 EFCAB2Q5VUJ9 269 aa29.78■■■□□ 2.36
SYNGR3-203ENST00000563869 C9orf84Q5VXU9 1444 aa29.78■■■□□ 2.36
SYNGR3-203ENST00000563869 ATP1B4Q9UN42 357 aaPredicted RBP29.77■■■□□ 2.36
SYNGR3-203ENST00000563869 PREX1Q8TCU6 1659 aa29.74■■■□□ 2.35
SYNGR3-203ENST00000563869 KIF14Q15058 1648 aa29.73■■■□□ 2.35
SYNGR3-203ENST00000563869 CERKQ8TCT0 537 aa29.71■■■□□ 2.35
SYNGR3-203ENST00000563869 ZNF518AQ6AHZ1 1483 aa29.7■■■□□ 2.35
SYNGR3-203ENST00000563869 LRRIQ1Q96JM4 1722 aa29.7■■■□□ 2.34
SYNGR3-203ENST00000563869 MAP3K1Q13233 1512 aa29.7■■■□□ 2.34
SYNGR3-203ENST00000563869 KDM5CP41229 1560 aa29.68■■■□□ 2.34
SYNGR3-203ENST00000563869 APLP2Q06481 763 aa29.67■■■□□ 2.34
SYNGR3-203ENST00000563869 TROQ12816 1431 aaPredicted RBP29.66■■■□□ 2.34
SYNGR3-203ENST00000563869 ARHGAP5Q13017 1502 aa29.66■■■□□ 2.34
SYNGR3-203ENST00000563869 CEBPAP49715 358 aaPredicted RBP29.62■■■□□ 2.33
SYNGR3-203ENST00000563869 AFAP1Q8N556 730 aa29.6■■■□□ 2.33
SYNGR3-203ENST00000563869 REREQ9P2R6 1566 aa29.6■■■□□ 2.33
SYNGR3-203ENST00000563869 DIP2CQ9Y2E4 1556 aa29.6■■■□□ 2.33
SYNGR3-203ENST00000563869 CDC42BPBQ9Y5S2 1711 aa29.59■■■□□ 2.33
SYNGR3-203ENST00000563869 STRCQ7RTU9 1775 aa29.59■■■□□ 2.33
SYNGR3-203ENST00000563869 TIAM1Q13009 1591 aa29.58■■■□□ 2.33
SYNGR3-203ENST00000563869 SETD1BQ9UPS6 1966 aaKnown RBP29.58■■■□□ 2.33
SYNGR3-203ENST00000563869 UHRF1BP1Q6BDS2 1440 aa29.55■■■□□ 2.32
SYNGR3-203ENST00000563869 DMRT2Q9Y5R5 561 aa29.55■■■□□ 2.32
SYNGR3-203ENST00000563869 MYT1LQ9UL68 1186 aa29.54■■■□□ 2.32
SYNGR3-203ENST00000563869 EHBP1L1Q8N3D4 1523 aa29.54■■■□□ 2.32
SYNGR3-203ENST00000563869 MLH3Q9UHC1 1453 aa29.54■■■□□ 2.32
SYNGR3-203ENST00000563869 ABCA6Q8N139 1617 aa29.53■■■□□ 2.32
SYNGR3-203ENST00000563869 MTUS2Q5JR59 1369 aa29.52■■■□□ 2.32
SYNGR3-203ENST00000563869 PREX2Q70Z35 1606 aa29.52■■■□□ 2.32
SYNGR3-203ENST00000563869 C3P01024 1663 aa29.5■■■□□ 2.31
SYNGR3-203ENST00000563869 AGLP35573 1532 aa29.49■■■□□ 2.31
SYNGR3-203ENST00000563869 ABCC1P33527 1531 aa29.48■■■□□ 2.31
SYNGR3-203ENST00000563869 ITSN2Q9NZM3 1697 aa29.47■■■□□ 2.31
SYNGR3-203ENST00000563869 TRAPPC8Q9Y2L5 1435 aa29.45■■■□□ 2.3
SYNGR3-203ENST00000563869 SUPT6HQ7KZ85 1726 aaKnown RBP29.44■■■□□ 2.3
SYNGR3-203ENST00000563869 LRRC9Q6ZRR7 1453 aa29.42■■■□□ 2.3
SYNGR3-203ENST00000563869 KIDINS220Q9ULH0 1771 aa29.41■■■□□ 2.3
SYNGR3-203ENST00000563869 PTPRTO14522 1441 aa29.41■■■□□ 2.3
SYNGR3-203ENST00000563869 CDC42BPAQ5VT25 1732 aa29.4■■■□□ 2.3
SYNGR3-203ENST00000563869 ESF1Q9H501 851 aaKnown RBP29.4■■■□□ 2.3
SYNGR3-203ENST00000563869 CNTLNQ9NXG0 1405 aa29.36■■■□□ 2.29
SYNGR3-203ENST00000563869 MROH2AA6NES4 1674 aa29.31■■■□□ 2.28
SYNGR3-203ENST00000563869 SAMD9LQ8IVG5 1584 aa29.3■■■□□ 2.28
SYNGR3-203ENST00000563869 DISP3Q9P2K9 1392 aa29.28■■■□□ 2.28
SYNGR3-203ENST00000563869 LTBP4Q8N2S1 1624 aa29.28■■■□□ 2.28
SYNGR3-203ENST00000563869 NCOA1Q15788 1441 aa29.28■■■□□ 2.28
SYNGR3-203ENST00000563869 CCNB3Q8WWL7 1395 aa29.26■■■□□ 2.28
SYNGR3-203ENST00000563869 NPATQ14207 1427 aa29.25■■■□□ 2.27
SYNGR3-203ENST00000563869 NCOA2Q15596 1464 aa29.24■■■□□ 2.27
SYNGR3-203ENST00000563869 IQSEC2Q5JU85 1478 aa29.24■■■□□ 2.27
SYNGR3-203ENST00000563869 SYCP2Q9BX26 1530 aa29.23■■■□□ 2.27
SYNGR3-203ENST00000563869 GPATCH8Q9UKJ3 1502 aaKnown RBP29.22■■■□□ 2.27
SYNGR3-203ENST00000563869 ZNF777Q9ULD5 760 aaPredicted RBP29.22■■■□□ 2.27
SYNGR3-203ENST00000563869 CAMSAP1Q5T5Y3 1602 aa29.2■■■□□ 2.27
SYNGR3-203ENST00000563869 ILDR2Q71H61 639 aa29.2■■■□□ 2.26
SYNGR3-203ENST00000563869 SPAG9O60271 1321 aaKnown RBP29.2■■■□□ 2.26
SYNGR3-203ENST00000563869 ZMYM3Q14202 1370 aa29.19■■■□□ 2.26
SYNGR3-203ENST00000563869 KANK4Q5T7N3 995 aaPredicted RBP29.19■■■□□ 2.26
SYNGR3-203ENST00000563869 ATP7AQ04656 1500 aa29.17■■■□□ 2.26
SYNGR3-203ENST00000563869 HNRNPMP52272 730 aaKnown RBP eCLIP29.16■■■□□ 2.26
SYNGR3-203ENST00000563869 INO80Q9ULG1 1556 aaPredicted RBP29.16■■■□□ 2.26
SYNGR3-203ENST00000563869 CLTCQ00610 1675 aaKnown RBP29.15■■■□□ 2.26
SYNGR3-203ENST00000563869 PLXNC1O60486 1568 aa29.15■■■□□ 2.26
SYNGR3-203ENST00000563869 KIAA1107Q9UPP5 1409 aa29.15■■■□□ 2.26
SYNGR3-203ENST00000563869 SPATA31D1Q6ZQQ2 1576 aa29.14■■■□□ 2.26
SYNGR3-203ENST00000563869 PLEKHH2Q8IVE3 1493 aa29.14■■■□□ 2.26
SYNGR3-203ENST00000563869 MIA2Q96PC5 1412 aa29.12■■■□□ 2.25
SYNGR3-203ENST00000563869 ZNF142P52746 1687 aaPredicted RBP29.12■■■□□ 2.25
SYNGR3-203ENST00000563869 SOCS7O14512 581 aa29.12■■■□□ 2.25
SYNGR3-203ENST00000563869 CFDP1Q9UEE9 299 aaPredicted RBP29.12■■■□□ 2.25
SYNGR3-203ENST00000563869 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
SYNGR3-203ENST00000563869 A2MP01023 1474 aa29.11■■■□□ 2.25
SYNGR3-203ENST00000563869 MYO3AQ8NEV4 1616 aa29.11■■■□□ 2.25
SYNGR3-203ENST00000563869 PLA2R1Q13018 1463 aa29.07■■■□□ 2.24
SYNGR3-203ENST00000563869 NCKAP5LQ9HCH0 1330 aa29.06■■■□□ 2.24
SYNGR3-203ENST00000563869 ADGBQ8N7X0 1667 aa29.05■■■□□ 2.24
SYNGR3-203ENST00000563869 CEP170BQ9Y4F5 1589 aaPredicted RBP29.05■■■□□ 2.24
SYNGR3-203ENST00000563869 PTPRKQ15262 1439 aa29.05■■■□□ 2.24
SYNGR3-203ENST00000563869 PKD2Q13563 968 aa29.03■■■□□ 2.24
SYNGR3-203ENST00000563869 GGT6Q6P531 493 aa29.02■■■□□ 2.24
SYNGR3-203ENST00000563869 TCOF1Q13428 1488 aaKnown RBP29.02■■■□□ 2.24
SYNGR3-203ENST00000563869 ZNF335Q9H4Z2 1342 aaPredicted RBP29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms