RNA–Protein interactions for RNA: ENST00000563850.1

VAT1L-202, Transcript of vesicle amine transport 1 like, humanhuman

TSL 5

Gene VAT1L, Length 615 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-202ENST00000563850 L3MBTL3Q96JM7 780 aaPredicted RBP12.18□□□□□ -0.46
VAT1L-202ENST00000563850 SMARCA4P51532 1647 aa12.18□□□□□ -0.46
VAT1L-202ENST00000563850 TOP2AP11388 1531 aaKnown RBP12.17□□□□□ -0.46
VAT1L-202ENST00000563850 LOC105371045A0A1W2PR82 267 aa12.16□□□□□ -0.46
VAT1L-202ENST00000563850 G3V3G9 751 aa12.16□□□□□ -0.46
VAT1L-202ENST00000563850 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
VAT1L-202ENST00000563850 DPY19L2Q6NUT2 758 aa12.15□□□□□ -0.46
VAT1L-202ENST00000563850 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
VAT1L-202ENST00000563850 PAXIP1Q6ZW49 1069 aaPredicted RBP12.13□□□□□ -0.47
VAT1L-202ENST00000563850 CFAP44Q96MT7 982 aa12.12□□□□□ -0.47
VAT1L-202ENST00000563850 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
VAT1L-202ENST00000563850 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
VAT1L-202ENST00000563850 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
VAT1L-202ENST00000563850 LHX8Q68G74 356 aa12.1□□□□□ -0.47
VAT1L-202ENST00000563850 MAMSTRQ6ZN01 415 aa12.09□□□□□ -0.47
VAT1L-202ENST00000563850 PPP1R37O75864 691 aa12.08□□□□□ -0.48
VAT1L-202ENST00000563850 SMARCA2P51531 1590 aa12.08□□□□□ -0.48
VAT1L-202ENST00000563850 C3orf67Q6ZVT6 689 aa12.07□□□□□ -0.48
VAT1L-202ENST00000563850 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
VAT1L-202ENST00000563850 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
VAT1L-202ENST00000563850 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
VAT1L-202ENST00000563850 POTEJP0CG39 1038 aa12.04□□□□□ -0.48
VAT1L-202ENST00000563850 PLCB2Q00722 1185 aa12.04□□□□□ -0.48
VAT1L-202ENST00000563850 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.02□□□□□ -0.49
VAT1L-202ENST00000563850 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
VAT1L-202ENST00000563850 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
VAT1L-202ENST00000563850 OTUD5Q96G74 571 aa11.95□□□□□ -0.5
VAT1L-202ENST00000563850 ABCC8Q09428 1581 aa11.94□□□□□ -0.5
VAT1L-202ENST00000563850 PPARGC1BQ86YN6 1023 aaKnown RBP11.94□□□□□ -0.5
VAT1L-202ENST00000563850 ZEB1P37275 1124 aaPredicted RBP11.93□□□□□ -0.5
VAT1L-202ENST00000563850 SLAIN1Q8ND83 568 aa11.92□□□□□ -0.5
VAT1L-202ENST00000563850 EEA1Q15075 1411 aa11.9□□□□□ -0.5
VAT1L-202ENST00000563850 TMC2Q8TDI7 906 aa11.89□□□□□ -0.51
VAT1L-202ENST00000563850 WRNQ14191 1432 aaPredicted RBP eCLIP11.88□□□□□ -0.51
VAT1L-202ENST00000563850 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
VAT1L-202ENST00000563850 TMEM92Q6UXU6 159 aa11.86□□□□□ -0.51
VAT1L-202ENST00000563850 FAM9AQ8IZU1 332 aaPredicted RBP11.86□□□□□ -0.51
VAT1L-202ENST00000563850 CADPS2Q86UW7 1296 aa11.85□□□□□ -0.51
VAT1L-202ENST00000563850 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
VAT1L-202ENST00000563850 C2orf72A6NCS6 295 aa11.84□□□□□ -0.51
VAT1L-202ENST00000563850 PDE4AP27815 886 aa11.84□□□□□ -0.51
VAT1L-202ENST00000563850 GPHNQ9NQX3 736 aaPredicted RBP11.84□□□□□ -0.51
VAT1L-202ENST00000563850 KIF3CO14782 793 aa11.83□□□□□ -0.52
VAT1L-202ENST00000563850 CRISPLD2Q9H0B8 497 aa11.83□□□□□ -0.52
VAT1L-202ENST00000563850 KIF21BO75037 1637 aa11.82□□□□□ -0.52
VAT1L-202ENST00000563850 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
VAT1L-202ENST00000563850 NCAPD3P42695 1498 aa11.79□□□□□ -0.52
VAT1L-202ENST00000563850 LARP6Q9BRS8 491 aaKnown RBP11.79□□□□□ -0.52
VAT1L-202ENST00000563850 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
VAT1L-202ENST00000563850 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
VAT1L-202ENST00000563850 CEP162Q5TB80 1403 aa11.77□□□□□ -0.52
VAT1L-202ENST00000563850 SNPHO15079 494 aa11.77□□□□□ -0.53
VAT1L-202ENST00000563850 FOXK1P85037 733 aa11.77□□□□□ -0.53
VAT1L-202ENST00000563850 TNIKQ9UKE5 1360 aa11.77□□□□□ -0.53
VAT1L-202ENST00000563850 GOLGA3Q08378 1498 aa11.76□□□□□ -0.53
VAT1L-202ENST00000563850 ATAD2BQ9ULI0 1458 aa11.76□□□□□ -0.53
VAT1L-202ENST00000563850 NESP48681 1621 aa11.75□□□□□ -0.53
VAT1L-202ENST00000563850 DSG2Q14126 1118 aa11.75□□□□□ -0.53
VAT1L-202ENST00000563850 MFSD10Q14728 455 aa11.75□□□□□ -0.53
VAT1L-202ENST00000563850 PPP1R15BQ5SWA1 713 aa11.75□□□□□ -0.53
VAT1L-202ENST00000563850 ERCC6Q03468 1493 aa11.75□□□□□ -0.53
VAT1L-202ENST00000563850 CUX2O14529 1486 aa11.74□□□□□ -0.53
VAT1L-202ENST00000563850 BIVM-ERCC5R4GMW8 1640 aa11.74□□□□□ -0.53
VAT1L-202ENST00000563850 SOGA1O94964 1423 aa11.73□□□□□ -0.53
VAT1L-202ENST00000563850 PLPP6Q8IY26 295 aa11.73□□□□□ -0.53
VAT1L-202ENST00000563850 WDR70Q9NW82 654 aa11.73□□□□□ -0.53
VAT1L-202ENST00000563850 DOK7Q18PE1 504 aa11.72□□□□□ -0.53
VAT1L-202ENST00000563850 PRDM2Q13029 1718 aa11.71□□□□□ -0.54
VAT1L-202ENST00000563850 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
VAT1L-202ENST00000563850 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
VAT1L-202ENST00000563850 TOP2BQ02880 1626 aa11.69□□□□□ -0.54
VAT1L-202ENST00000563850 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
VAT1L-202ENST00000563850 RUSC2Q8N2Y8 1516 aa11.68□□□□□ -0.54
VAT1L-202ENST00000563850 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
VAT1L-202ENST00000563850 HOXB3P14651 431 aaPredicted RBP11.67□□□□□ -0.54
VAT1L-202ENST00000563850 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
VAT1L-202ENST00000563850 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
VAT1L-202ENST00000563850 SLC34A2O95436 690 aa11.65□□□□□ -0.54
VAT1L-202ENST00000563850 ZSWIM6Q9HCJ5 1215 aa11.63□□□□□ -0.55
VAT1L-202ENST00000563850 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
VAT1L-202ENST00000563850 CAMK2BQ13554 666 aa11.61□□□□□ -0.55
VAT1L-202ENST00000563850 E2F4Q16254 413 aa11.61□□□□□ -0.55
VAT1L-202ENST00000563850 FAM163AQ96GL9 167 aaPredicted RBP11.61□□□□□ -0.55
VAT1L-202ENST00000563850 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
VAT1L-202ENST00000563850 PTCD2Q8WV60 388 aaKnown RBP11.59□□□□□ -0.55
VAT1L-202ENST00000563850 KDM2AQ9Y2K7 1162 aa11.59□□□□□ -0.55
VAT1L-202ENST00000563850 TBC1D12O60347 775 aa11.58□□□□□ -0.56
VAT1L-202ENST00000563850 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.56
VAT1L-202ENST00000563850 ST18O60284 1047 aa11.57□□□□□ -0.56
VAT1L-202ENST00000563850 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
VAT1L-202ENST00000563850 OXER1Q8TDS5 423 aa11.57□□□□□ -0.56
VAT1L-202ENST00000563850 PCDHGA4Q9Y5G9 962 aa11.57□□□□□ -0.56
VAT1L-202ENST00000563850 THOC2Q8NI27 1593 aaKnown RBP11.57□□□□□ -0.56
VAT1L-202ENST00000563850 VPS8Q8N3P4 1428 aa11.55□□□□□ -0.56
VAT1L-202ENST00000563850 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
VAT1L-202ENST00000563850 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
VAT1L-202ENST00000563850 GPR153Q6NV75 609 aa11.54□□□□□ -0.56
VAT1L-202ENST00000563850 CLIP1P30622 1438 aa11.53□□□□□ -0.56
VAT1L-202ENST00000563850 MAP3K9P80192 1104 aa11.53□□□□□ -0.56
VAT1L-202ENST00000563850 ARSIQ5FYB1 569 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms