RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 KIAA0556O60303 1618 aa14.14□□□□□ -0.15
HERC2-203ENST00000563670 ARHGEF12Q9NZN5 1544 aa14.14□□□□□ -0.15
HERC2-203ENST00000563670 NCOA1Q15788 1441 aa14.12□□□□□ -0.15
HERC2-203ENST00000563670 FHOD3Q2V2M9 1422 aa14.12□□□□□ -0.15
HERC2-203ENST00000563670 ABCA8O94911 1581 aa14.11□□□□□ -0.15
HERC2-203ENST00000563670 ZMYM4Q5VZL5 1548 aa14.1□□□□□ -0.15
HERC2-203ENST00000563670 DENND4BO75064 1496 aaPredicted RBP14.09□□□□□ -0.15
HERC2-203ENST00000563670 RICTORQ6R327 1708 aa14.09□□□□□ -0.15
HERC2-203ENST00000563670 CARMIL1Q5VZK9 1371 aa14.09□□□□□ -0.15
HERC2-203ENST00000563670 CEBPAP49715 358 aaPredicted RBP14.08□□□□□ -0.16
HERC2-203ENST00000563670 EFCAB5A4FU69 1503 aa14.08□□□□□ -0.16
HERC2-203ENST00000563670 MAGI2Q86UL8 1455 aa14.07□□□□□ -0.16
HERC2-203ENST00000563670 ZFYVE16Q7Z3T8 1539 aa14.07□□□□□ -0.16
HERC2-203ENST00000563670 MLECQ14165 292 aa14.07□□□□□ -0.16
HERC2-203ENST00000563670 ZNF335Q9H4Z2 1342 aaPredicted RBP14.07□□□□□ -0.16
HERC2-203ENST00000563670 RGS17Q9UGC6 210 aaPredicted RBP14.05□□□□□ -0.16
HERC2-203ENST00000563670 SETD1BQ9UPS6 1966 aaKnown RBP14.04□□□□□ -0.16
HERC2-203ENST00000563670 EEA1Q15075 1411 aa14.02□□□□□ -0.16
HERC2-203ENST00000563670 TOM1O60784 492 aa14□□□□□ -0.17
HERC2-203ENST00000563670 PIP4K2BP78356 416 aa14□□□□□ -0.17
HERC2-203ENST00000563670 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
HERC2-203ENST00000563670 SRCAPQ6ZRS2 3230 aa13.98□□□□□ -0.17
HERC2-203ENST00000563670 ATP10BO94823 1461 aa13.98□□□□□ -0.17
HERC2-203ENST00000563670 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
HERC2-203ENST00000563670 TRAPPC8Q9Y2L5 1435 aa13.97□□□□□ -0.17
HERC2-203ENST00000563670 ATP10AO60312 1499 aa13.95□□□□□ -0.18
HERC2-203ENST00000563670 CAMSAP1Q5T5Y3 1602 aa13.95□□□□□ -0.18
HERC2-203ENST00000563670 C9orf84Q5VXU9 1444 aa13.95□□□□□ -0.18
HERC2-203ENST00000563670 RAPGEF2Q9Y4G8 1499 aa13.94□□□□□ -0.18
HERC2-203ENST00000563670 HECW1Q76N89 1606 aa13.93□□□□□ -0.18
HERC2-203ENST00000563670 GOLGA3Q08378 1498 aa13.93□□□□□ -0.18
HERC2-203ENST00000563670 CFAP74Q9C0B2 1584 aa13.93□□□□□ -0.18
HERC2-203ENST00000563670 C3P01024 1663 aa13.91□□□□□ -0.18
HERC2-203ENST00000563670 PKD2Q13563 968 aa13.9□□□□□ -0.18
HERC2-203ENST00000563670 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.19
HERC2-203ENST00000563670 PLA2R1Q13018 1463 aa13.89□□□□□ -0.19
HERC2-203ENST00000563670 MAPK8IP2Q13387 824 aaPredicted RBP13.89□□□□□ -0.19
HERC2-203ENST00000563670 POTEAQ6S8J7 498 aa13.89□□□□□ -0.19
HERC2-203ENST00000563670 ALKQ9UM73 1620 aa13.89□□□□□ -0.19
HERC2-203ENST00000563670 CPS1P31327 1500 aa13.89□□□□□ -0.19
HERC2-203ENST00000563670 PTPRKQ15262 1439 aa13.89□□□□□ -0.19
HERC2-203ENST00000563670 PRXQ9BXM0 1461 aa13.88□□□□□ -0.19
HERC2-203ENST00000563670 TCOF1Q13428 1488 aaKnown RBP13.87□□□□□ -0.19
HERC2-203ENST00000563670 CTTNBP2Q8WZ74 1663 aa13.87□□□□□ -0.19
HERC2-203ENST00000563670 NPATQ14207 1427 aa13.84□□□□□ -0.19
HERC2-203ENST00000563670 ARID3CA6NKF2 412 aa13.84□□□□□ -0.19
HERC2-203ENST00000563670 UPF1Q92900 1129 aaKnown RBP eCLIP13.82□□□□□ -0.2
HERC2-203ENST00000563670 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
HERC2-203ENST00000563670 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
HERC2-203ENST00000563670 AGLP35573 1532 aa13.8□□□□□ -0.2
HERC2-203ENST00000563670 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
HERC2-203ENST00000563670 UBTFP17480 764 aaKnown RBP13.79□□□□□ -0.2
HERC2-203ENST00000563670 SCAPERQ9BY12 1400 aa13.79□□□□□ -0.2
HERC2-203ENST00000563670 CNTLNQ9NXG0 1405 aa13.79□□□□□ -0.2
HERC2-203ENST00000563670 SHANK2Q9UPX8 1470 aa13.79□□□□□ -0.2
HERC2-203ENST00000563670 ZNF142P52746 1687 aaPredicted RBP13.76□□□□□ -0.21
HERC2-203ENST00000563670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.75□□□□□ -0.21
HERC2-203ENST00000563670 ESF1Q9H501 851 aaKnown RBP13.75□□□□□ -0.21
HERC2-203ENST00000563670 CEP170BQ9Y4F5 1589 aaPredicted RBP13.71□□□□□ -0.21
HERC2-203ENST00000563670 RANGAP1P46060 587 aaPredicted RBP13.71□□□□□ -0.21
HERC2-203ENST00000563670 DIP2CQ9Y2E4 1556 aa13.71□□□□□ -0.22
HERC2-203ENST00000563670 MYO3AQ8NEV4 1616 aa13.7□□□□□ -0.22
HERC2-203ENST00000563670 KDM5CP41229 1560 aa13.7□□□□□ -0.22
HERC2-203ENST00000563670 MROH2AA6NES4 1674 aa13.69□□□□□ -0.22
HERC2-203ENST00000563670 ZNF518AQ6AHZ1 1483 aa13.69□□□□□ -0.22
HERC2-203ENST00000563670 RAPGEF6Q8TEU7 1601 aa13.69□□□□□ -0.22
HERC2-203ENST00000563670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
HERC2-203ENST00000563670 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
HERC2-203ENST00000563670 VWDEQ8N2E2 1590 aa13.68□□□□□ -0.22
HERC2-203ENST00000563670 PLCH2O75038 1416 aa13.68□□□□□ -0.22
HERC2-203ENST00000563670 NUP153P49790 1475 aaKnown RBP13.67□□□□□ -0.22
HERC2-203ENST00000563670 PLEKHD1A6NEE1 506 aa13.67□□□□□ -0.22
HERC2-203ENST00000563670 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
HERC2-203ENST00000563670 RNF17Q9BXT8 1623 aaKnown RBP13.67□□□□□ -0.22
HERC2-203ENST00000563670 NEURL4Q96JN8 1562 aa13.65□□□□□ -0.22
HERC2-203ENST00000563670 SUPT6HQ7KZ85 1726 aaKnown RBP13.64□□□□□ -0.23
HERC2-203ENST00000563670 P3H3Q8IVL6 736 aa13.63□□□□□ -0.23
HERC2-203ENST00000563670 MLH3Q9UHC1 1453 aa13.62□□□□□ -0.23
HERC2-203ENST00000563670 ABCA6Q8N139 1617 aa13.62□□□□□ -0.23
HERC2-203ENST00000563670 SAMD9Q5K651 1589 aa13.62□□□□□ -0.23
HERC2-203ENST00000563670 LRRC7Q96NW7 1537 aa13.61□□□□□ -0.23
HERC2-203ENST00000563670 HOXD11P31277 338 aaPredicted RBP13.61□□□□□ -0.23
HERC2-203ENST00000563670 LOC105371045A0A1W2PR82 267 aa13.6□□□□□ -0.23
HERC2-203ENST00000563670 AFAP1Q8N556 730 aa13.6□□□□□ -0.23
HERC2-203ENST00000563670 A2ML1A8K2U0 1454 aa13.6□□□□□ -0.23
HERC2-203ENST00000563670 POLR1AO95602 1720 aaPredicted RBP13.59□□□□□ -0.23
HERC2-203ENST00000563670 EFCAB2Q5VUJ9 269 aa13.59□□□□□ -0.23
HERC2-203ENST00000563670 SYNMO15061 1565 aa13.58□□□□□ -0.23
HERC2-203ENST00000563670 DNMT1P26358 1616 aaKnown RBP13.58□□□□□ -0.24
HERC2-203ENST00000563670 ZBTB22O15209 634 aa13.58□□□□□ -0.24
HERC2-203ENST00000563670 FAM135BQ49AJ0 1406 aa13.57□□□□□ -0.24
HERC2-203ENST00000563670 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
HERC2-203ENST00000563670 MED14O60244 1454 aa13.55□□□□□ -0.24
HERC2-203ENST00000563670 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
HERC2-203ENST00000563670 CLIP1P30622 1438 aa13.54□□□□□ -0.24
HERC2-203ENST00000563670 IFFO2Q5TF58 517 aa13.53□□□□□ -0.24
HERC2-203ENST00000563670 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
HERC2-203ENST00000563670 ARHGAP35Q9NRY4 1499 aa13.53□□□□□ -0.24
HERC2-203ENST00000563670 TRIM52Q96A61 297 aa13.52□□□□□ -0.25
HERC2-203ENST00000563670 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms