RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
PDXDC1-208ENST00000563522 PTPRMP28827 1452 aa13.75□□□□□ -0.21
PDXDC1-208ENST00000563522 PLEKHD1A6NEE1 506 aa13.75□□□□□ -0.21
PDXDC1-208ENST00000563522 ADAMTSL3P82987 1691 aa13.75□□□□□ -0.21
PDXDC1-208ENST00000563522 FHOD3Q2V2M9 1422 aa13.73□□□□□ -0.21
PDXDC1-208ENST00000563522 FRMPD1Q5SYB0 1578 aa13.73□□□□□ -0.21
PDXDC1-208ENST00000563522 ZBTB22O15209 634 aa13.72□□□□□ -0.21
PDXDC1-208ENST00000563522 DENND4BO75064 1496 aaPredicted RBP13.72□□□□□ -0.21
PDXDC1-208ENST00000563522 EFCAB5A4FU69 1503 aa13.71□□□□□ -0.21
PDXDC1-208ENST00000563522 ARID4BQ4LE39 1312 aaPredicted RBP13.7□□□□□ -0.22
PDXDC1-208ENST00000563522 AKNAQ7Z591 1439 aa13.7□□□□□ -0.22
PDXDC1-208ENST00000563522 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
PDXDC1-208ENST00000563522 FANCAO15360 1455 aa13.69□□□□□ -0.22
PDXDC1-208ENST00000563522 CFAP74Q9C0B2 1584 aa13.69□□□□□ -0.22
PDXDC1-208ENST00000563522 BCORL1Q5H9F3 1711 aa13.69□□□□□ -0.22
PDXDC1-208ENST00000563522 RANGAP1P46060 587 aaPredicted RBP13.68□□□□□ -0.22
PDXDC1-208ENST00000563522 DSG3P32926 999 aa13.67□□□□□ -0.22
PDXDC1-208ENST00000563522 FBXO41Q8TF61 875 aa13.67□□□□□ -0.22
PDXDC1-208ENST00000563522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.67□□□□□ -0.222e-7■■■■■ 47.7
PDXDC1-208ENST00000563522 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
PDXDC1-208ENST00000563522 ZMYM4Q5VZL5 1548 aa13.66□□□□□ -0.22
PDXDC1-208ENST00000563522 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
PDXDC1-208ENST00000563522 MADDQ8WXG6 1647 aa13.65□□□□□ -0.22
PDXDC1-208ENST00000563522 PCF11O94913 1555 aaKnown RBP13.65□□□□□ -0.22
PDXDC1-208ENST00000563522 RICTORQ6R327 1708 aa13.64□□□□□ -0.23
PDXDC1-208ENST00000563522 LMTK3Q96Q04 1460 aa13.63□□□□□ -0.23
PDXDC1-208ENST00000563522 TTC37Q6PGP7 1564 aa13.62□□□□□ -0.23
PDXDC1-208ENST00000563522 ZFYVE16Q7Z3T8 1539 aa13.62□□□□□ -0.23
PDXDC1-208ENST00000563522 PLCH2O75038 1416 aa13.62□□□□□ -0.23
PDXDC1-208ENST00000563522 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
PDXDC1-208ENST00000563522 CDK13Q14004 1512 aaKnown RBP13.6□□□□□ -0.23
PDXDC1-208ENST00000563522 YEATS2Q9ULM3 1422 aa13.6□□□□□ -0.23
PDXDC1-208ENST00000563522 SCAPERQ9BY12 1400 aa13.59□□□□□ -0.23
PDXDC1-208ENST00000563522 CDK11AQ9UQ88 783 aaPredicted RBP13.59□□□□□ -0.23
PDXDC1-208ENST00000563522 EFCAB2Q5VUJ9 269 aa13.58□□□□□ -0.24
PDXDC1-208ENST00000563522 RIMS1Q86UR5 1692 aaKnown RBP13.58□□□□□ -0.24
PDXDC1-208ENST00000563522 ABCB7O75027 752 aa13.57□□□□□ -0.24
PDXDC1-208ENST00000563522 HECW1Q76N89 1606 aa13.57□□□□□ -0.24
PDXDC1-208ENST00000563522 UBTFP17480 764 aaKnown RBP13.56□□□□□ -0.24
PDXDC1-208ENST00000563522 ATP10AO60312 1499 aa13.55□□□□□ -0.24
PDXDC1-208ENST00000563522 C9orf84Q5VXU9 1444 aa13.55□□□□□ -0.24
PDXDC1-208ENST00000563522 ARHGAP35Q9NRY4 1499 aa13.54□□□□□ -0.24
PDXDC1-208ENST00000563522 TROQ12816 1431 aaPredicted RBP13.53□□□□□ -0.24
PDXDC1-208ENST00000563522 ZNF518AQ6AHZ1 1483 aa13.53□□□□□ -0.24
PDXDC1-208ENST00000563522 HSPA2P54652 639 aa13.52□□□□□ -0.25
PDXDC1-208ENST00000563522 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.25
PDXDC1-208ENST00000563522 CLIP1P30622 1438 aa13.52□□□□□ -0.25
PDXDC1-208ENST00000563522 ARHGEF12Q9NZN5 1544 aa13.52□□□□□ -0.25
PDXDC1-208ENST00000563522 SIGLEC1Q9BZZ2 1709 aa13.52□□□□□ -0.25
PDXDC1-208ENST00000563522 MLECQ14165 292 aa13.51□□□□□ -0.25
PDXDC1-208ENST00000563522 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
PDXDC1-208ENST00000563522 KIF14Q15058 1648 aa13.5□□□□□ -0.25
PDXDC1-208ENST00000563522 ATXN8OSP0DMR3 200 aa13.5□□□□□ -0.25
PDXDC1-208ENST00000563522 MYO5CQ9NQX4 1742 aa13.5□□□□□ -0.25
PDXDC1-208ENST00000563522 KDM5CP41229 1560 aa13.49□□□□□ -0.25
PDXDC1-208ENST00000563522 FER1L4A9Z1Z3 1794 aa13.48□□□□□ -0.25
PDXDC1-208ENST00000563522 ARHGAP5Q13017 1502 aa13.48□□□□□ -0.25
PDXDC1-208ENST00000563522 REREQ9P2R6 1566 aa13.46□□□□□ -0.25
PDXDC1-208ENST00000563522 AFAP1Q8N556 730 aa13.46□□□□□ -0.25
PDXDC1-208ENST00000563522 ATF5Q9Y2D1 282 aaPredicted RBP13.46□□□□□ -0.25
PDXDC1-208ENST00000563522 MLH3Q9UHC1 1453 aa13.45□□□□□ -0.26
PDXDC1-208ENST00000563522 CERKQ8TCT0 537 aa13.45□□□□□ -0.26
PDXDC1-208ENST00000563522 CCDC18Q5T9S5 1454 aa13.44□□□□□ -0.26
PDXDC1-208ENST00000563522 POLA2Q14181 598 aa13.44□□□□□ -0.26
PDXDC1-208ENST00000563522 CASKIN1Q8WXD9 1431 aa13.43□□□□□ -0.26
PDXDC1-208ENST00000563522 PREX1Q8TCU6 1659 aa13.43□□□□□ -0.26
PDXDC1-208ENST00000563522 DIP2CQ9Y2E4 1556 aa13.42□□□□□ -0.26
PDXDC1-208ENST00000563522 UHRF1BP1Q6BDS2 1440 aa13.42□□□□□ -0.26
PDXDC1-208ENST00000563522 CEBPAP49715 358 aaPredicted RBP13.42□□□□□ -0.26
PDXDC1-208ENST00000563522 AGLP35573 1532 aa13.42□□□□□ -0.26
PDXDC1-208ENST00000563522 MYT1LQ9UL68 1186 aa13.41□□□□□ -0.26
PDXDC1-208ENST00000563522 TRAPPC8Q9Y2L5 1435 aa13.39□□□□□ -0.27
PDXDC1-208ENST00000563522 ABCC1P33527 1531 aa13.39□□□□□ -0.27
PDXDC1-208ENST00000563522 PREX2Q70Z35 1606 aa13.39□□□□□ -0.27
PDXDC1-208ENST00000563522 ESF1Q9H501 851 aaKnown RBP13.38□□□□□ -0.27
PDXDC1-208ENST00000563522 CDC42BPBQ9Y5S2 1711 aa13.38□□□□□ -0.27
PDXDC1-208ENST00000563522 ABCA6Q8N139 1617 aa13.38□□□□□ -0.27
PDXDC1-208ENST00000563522 CNTLNQ9NXG0 1405 aa13.38□□□□□ -0.27
PDXDC1-208ENST00000563522 FYCO1Q9BQS8 1478 aa13.37□□□□□ -0.27
PDXDC1-208ENST00000563522 LRRIQ1Q96JM4 1722 aa13.37□□□□□ -0.27
PDXDC1-208ENST00000563522 PTPRTO14522 1441 aa13.36□□□□□ -0.27
PDXDC1-208ENST00000563522 SETD1BQ9UPS6 1966 aaKnown RBP13.34□□□□□ -0.27
PDXDC1-208ENST00000563522 ITSN2Q9NZM3 1697 aa13.34□□□□□ -0.27
PDXDC1-208ENST00000563522 STRCQ7RTU9 1775 aa13.33□□□□□ -0.28
PDXDC1-208ENST00000563522 NPATQ14207 1427 aa13.32□□□□□ -0.28
PDXDC1-208ENST00000563522 KIAA1107Q9UPP5 1409 aa13.32□□□□□ -0.28
PDXDC1-208ENST00000563522 KIDINS220Q9ULH0 1771 aa13.32□□□□□ -0.28
PDXDC1-208ENST00000563522 SAMD9LQ8IVG5 1584 aa13.32□□□□□ -0.28
PDXDC1-208ENST00000563522 C3P01024 1663 aa13.31□□□□□ -0.28
PDXDC1-208ENST00000563522 PLEKHH2Q8IVE3 1493 aa13.31□□□□□ -0.28
PDXDC1-208ENST00000563522 GPATCH8Q9UKJ3 1502 aaKnown RBP13.31□□□□□ -0.28
PDXDC1-208ENST00000563522 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
PDXDC1-208ENST00000563522 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
PDXDC1-208ENST00000563522 NCOA1Q15788 1441 aa13.3□□□□□ -0.28
PDXDC1-208ENST00000563522 ZNF777Q9ULD5 760 aaPredicted RBP13.29□□□□□ -0.28
PDXDC1-208ENST00000563522 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
PDXDC1-208ENST00000563522 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
PDXDC1-208ENST00000563522 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
PDXDC1-208ENST00000563522 MROH2AA6NES4 1674 aa13.28□□□□□ -0.28
PDXDC1-208ENST00000563522 HNRNPMP52272 730 aaKnown RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms