RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	SIGLEC1	Q9BZZ2	1709 aa		14.25	□□□□□ -0.13
CKLF-208	ENST00000563092	FANCA	O15360	1455 aa		14.25	□□□□□ -0.13
CKLF-208	ENST00000563092	MAGI2	Q86UL8	1455 aa		14.25	□□□□□ -0.13
CKLF-208	ENST00000563092	CFAP74	Q9C0B2	1584 aa		14.24	□□□□□ -0.13
CKLF-208	ENST00000563092	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	14.24	□□□□□ -0.13
CKLF-208	ENST00000563092	CSRNP3	Q8WYN3	585 aa		14.23	□□□□□ -0.13
CKLF-208	ENST00000563092	POGZ	Q7Z3K3	1410 aa		14.22	□□□□□ -0.13
CKLF-208	ENST00000563092	YEATS2	Q9ULM3	1422 aa		14.22	□□□□□ -0.13
CKLF-208	ENST00000563092	HSPA2	P54652	639 aa		14.21	□□□□□ -0.13
CKLF-208	ENST00000563092	EFCAB5	A4FU69	1503 aa		14.2	□□□□□ -0.14
CKLF-208	ENST00000563092	ZFYVE16	Q7Z3T8	1539 aa		14.2	□□□□□ -0.14
CKLF-208	ENST00000563092	PLEKHD1	A6NEE1	506 aa		14.2	□□□□□ -0.14
CKLF-208	ENST00000563092	TTC37	Q6PGP7	1564 aa		14.2	□□□□□ -0.14
CKLF-208	ENST00000563092	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14.19	□□□□□ -0.14
CKLF-208	ENST00000563092	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.19	□□□□□ -0.14
CKLF-208	ENST00000563092	NPM3	O75607	178 aa	Known RBP	14.18	□□□□□ -0.14
CKLF-208	ENST00000563092	CERK	Q8TCT0	537 aa		14.18	□□□□□ -0.14
CKLF-208	ENST00000563092	HECW1	Q76N89	1606 aa		14.18	□□□□□ -0.14
CKLF-208	ENST00000563092	ARHGEF12	Q9NZN5	1544 aa		14.17	□□□□□ -0.14
CKLF-208	ENST00000563092	PLCH2	O75038	1416 aa		14.16	□□□□□ -0.14
CKLF-208	ENST00000563092	EEA1	Q15075	1411 aa		14.15	□□□□□ -0.14
CKLF-208	ENST00000563092	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
CKLF-208	ENST00000563092	ATP10A	O60312	1499 aa		14.13	□□□□□ -0.15
CKLF-208	ENST00000563092	FER1L4	A9Z1Z3	1794 aa		14.13	□□□□□ -0.15
CKLF-208	ENST00000563092	SCAPER	Q9BY12	1400 aa		14.13	□□□□□ -0.15
CKLF-208	ENST00000563092	C9orf84	Q5VXU9	1444 aa		14.11	□□□□□ -0.15
CKLF-208	ENST00000563092	PREX1	Q8TCU6	1659 aa		14.1	□□□□□ -0.15
CKLF-208	ENST00000563092	CDK13	Q14004	1512 aa	Known RBP	14.1	□□□□□ -0.15
CKLF-208	ENST00000563092	STRC	Q7RTU9	1775 aa		14.08	□□□□□ -0.16
CKLF-208	ENST00000563092	KDM5C	P41229	1560 aa		14.08	□□□□□ -0.16
CKLF-208	ENST00000563092	MLEC	Q14165	292 aa		14.07	□□□□□ -0.16
CKLF-208	ENST00000563092	RERE	Q9P2R6	1566 aa		14.06	□□□□□ -0.16
CKLF-208	ENST00000563092	ZNF518A	Q6AHZ1	1483 aa		14.06	□□□□□ -0.16
CKLF-208	ENST00000563092	EFCAB2	Q5VUJ9	269 aa		14.05	□□□□□ -0.16
CKLF-208	ENST00000563092	RANGAP1	P46060	587 aa	Predicted RBP	14.04	□□□□□ -0.16
CKLF-208	ENST00000563092	CEBPA	P49715	358 aa	Predicted RBP	14.04	□□□□□ -0.16
CKLF-208	ENST00000563092	ILDR2	Q71H61	639 aa		14.03	□□□□□ -0.16
CKLF-208	ENST00000563092	PTPRT	O14522	1441 aa		14.03	□□□□□ -0.16
CKLF-208	ENST00000563092	MYO5C	Q9NQX4	1742 aa		14.03	□□□□□ -0.16
CKLF-208	ENST00000563092	UHRF1BP1	Q6BDS2	1440 aa		14.02	□□□□□ -0.16
CKLF-208	ENST00000563092	KIF14	Q15058	1648 aa		14.01	□□□□□ -0.17
CKLF-208	ENST00000563092	DIP2C	Q9Y2E4	1556 aa		14.01	□□□□□ -0.17
CKLF-208	ENST00000563092	MLH3	Q9UHC1	1453 aa		14.01	□□□□□ -0.17
CKLF-208	ENST00000563092	FMN1	Q68DA7	1419 aa		14.01	□□□□□ -0.17
CKLF-208	ENST00000563092	SOCS7	O14512	581 aa		14.01	□□□□□ -0.17
CKLF-208	ENST00000563092	AGL	P35573	1532 aa		14	□□□□□ -0.17
CKLF-208	ENST00000563092	TRO	Q12816	1431 aa	Predicted RBP	14	□□□□□ -0.17
CKLF-208	ENST00000563092	AFAP1	Q8N556	730 aa		14	□□□□□ -0.17
CKLF-208	ENST00000563092	SETD1B	Q9UPS6	1966 aa	Known RBP	14	□□□□□ -0.17
CKLF-208	ENST00000563092	LTBP4	Q8N2S1	1624 aa		13.99	□□□□□ -0.17
CKLF-208	ENST00000563092	ARHGAP35	Q9NRY4	1499 aa		13.99	□□□□□ -0.17
CKLF-208	ENST00000563092	DISP3	Q9P2K9	1392 aa		13.98	□□□□□ -0.17
CKLF-208	ENST00000563092	IQSEC2	Q5JU85	1478 aa		13.98	□□□□□ -0.17
CKLF-208	ENST00000563092	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.97	□□□□□ -0.17
CKLF-208	ENST00000563092	C3	P01024	1663 aa		13.97	□□□□□ -0.17
CKLF-208	ENST00000563092	ABCA6	Q8N139	1617 aa		13.97	□□□□□ -0.17
CKLF-208	ENST00000563092	ARHGAP5	Q13017	1502 aa		13.96	□□□□□ -0.17
CKLF-208	ENST00000563092	TRAPPC8	Q9Y2L5	1435 aa		13.96	□□□□□ -0.18
CKLF-208	ENST00000563092	NCOA1	Q15788	1441 aa		13.94	□□□□□ -0.18
CKLF-208	ENST00000563092	ABCC1	P33527	1531 aa		13.94	□□□□□ -0.18
CKLF-208	ENST00000563092	CDC42BPB	Q9Y5S2	1711 aa		13.93	□□□□□ -0.18
CKLF-208	ENST00000563092	LRRIQ1	Q96JM4	1722 aa		13.93	□□□□□ -0.18
CKLF-208	ENST00000563092	SPATA31D1	Q6ZQQ2	1576 aa		13.92	□□□□□ -0.18
CKLF-208	ENST00000563092	CLIP1	P30622	1438 aa		13.92	□□□□□ -0.18
CKLF-208	ENST00000563092	CNTLN	Q9NXG0	1405 aa		13.92	□□□□□ -0.18
CKLF-208	ENST00000563092	PREX2	Q70Z35	1606 aa		13.92	□□□□□ -0.18
CKLF-208	ENST00000563092	NPAT	Q14207	1427 aa		13.9	□□□□□ -0.18
CKLF-208	ENST00000563092	KIDINS220	Q9ULH0	1771 aa		13.9	□□□□□ -0.18
CKLF-208	ENST00000563092	ITSN2	Q9NZM3	1697 aa		13.88	□□□□□ -0.19
CKLF-208	ENST00000563092	MROH2A	A6NES4	1674 aa		13.88	□□□□□ -0.19
CKLF-208	ENST00000563092	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.87	□□□□□ -0.19
CKLF-208	ENST00000563092	SAMD9L	Q8IVG5	1584 aa		13.85	□□□□□ -0.19
CKLF-208	ENST00000563092	CASKIN1	Q8WXD9	1431 aa		13.85	□□□□□ -0.19
CKLF-208	ENST00000563092		U3KPZ7	1027 aa	Predicted RBP	13.85	□□□□□ -0.19
CKLF-208	ENST00000563092	CAMSAP1	Q5T5Y3	1602 aa		13.85	□□□□□ -0.19
CKLF-208	ENST00000563092	CCDC18	Q5T9S5	1454 aa		13.85	□□□□□ -0.19
CKLF-208	ENST00000563092	UBTF	P17480	764 aa	Known RBP	13.84	□□□□□ -0.19
CKLF-208	ENST00000563092	ZMYM3	Q14202	1370 aa		13.83	□□□□□ -0.19
CKLF-208	ENST00000563092	PLA2R1	Q13018	1463 aa		13.83	□□□□□ -0.2
CKLF-208	ENST00000563092	ESF1	Q9H501	851 aa	Known RBP	13.83	□□□□□ -0.2
CKLF-208	ENST00000563092	MYT1L	Q9UL68	1186 aa		13.83	□□□□□ -0.2
CKLF-208	ENST00000563092	CDC42BPA	Q5VT25	1732 aa		13.83	□□□□□ -0.2
CKLF-208	ENST00000563092	PLXNC1	O60486	1568 aa		13.83	□□□□□ -0.2
CKLF-208	ENST00000563092	TCOF1	Q13428	1488 aa	Known RBP	13.82	□□□□□ -0.2
CKLF-208	ENST00000563092	ZNF142	P52746	1687 aa	Predicted RBP	13.82	□□□□□ -0.2
CKLF-208	ENST00000563092	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.8	□□□□□ -0.2
CKLF-208	ENST00000563092	PTPRK	Q15262	1439 aa		13.8	□□□□□ -0.2
CKLF-208	ENST00000563092	KIAA1107	Q9UPP5	1409 aa		13.8	□□□□□ -0.2
CKLF-208	ENST00000563092	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.8	□□□□□ -0.2
CKLF-208	ENST00000563092	PKD2	Q13563	968 aa		13.79	□□□□□ -0.2
CKLF-208	ENST00000563092	MYO3A	Q8NEV4	1616 aa		13.79	□□□□□ -0.2
CKLF-208	ENST00000563092	NCKAP5L	Q9HCH0	1330 aa		13.78	□□□□□ -0.2
CKLF-208	ENST00000563092	SYCP2	Q9BX26	1530 aa		13.78	□□□□□ -0.2
CKLF-208	ENST00000563092	INO80	Q9ULG1	1556 aa	Predicted RBP	13.78	□□□□□ -0.2
CKLF-208	ENST00000563092	SPAG9	O60271	1321 aa	Known RBP	13.77	□□□□□ -0.21
CKLF-208	ENST00000563092	ATP7A	Q04656	1500 aa		13.77	□□□□□ -0.21
CKLF-208	ENST00000563092	FYCO1	Q9BQS8	1478 aa		13.77	□□□□□ -0.21
CKLF-208	ENST00000563092	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.77	□□□□□ -0.21
CKLF-208	ENST00000563092	A2M	P01023	1474 aa		13.76	□□□□□ -0.21
CKLF-208	ENST00000563092	KCNA4	P22459	653 aa		13.76	□□□□□ -0.21

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