RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 ADAMTS12P58397 1594 aa9.87□□□□□ -0.83
CDH13-206ENST00000562601 RIOK3O14730 519 aaKnown RBP9.86□□□□□ -0.83
CDH13-206ENST00000562601 ERICH3Q5RHP9 1530 aa9.86□□□□□ -0.83
CDH13-206ENST00000562601 RIMBP3CA6NJZ7 1639 aa9.85□□□□□ -0.83
CDH13-206ENST00000562601 RIMBP3BA6NNM3 1639 aa9.85□□□□□ -0.83
CDH13-206ENST00000562601 RIMBP3Q9UFD9 1639 aa9.85□□□□□ -0.83
CDH13-206ENST00000562601 PCDHB8Q9UN66 801 aa9.85□□□□□ -0.83
CDH13-206ENST00000562601 KIF27Q86VH2 1401 aa9.84□□□□□ -0.83
CDH13-206ENST00000562601 TIE1P35590 1138 aa9.84□□□□□ -0.83
CDH13-206ENST00000562601 GRIN2AQ12879 1464 aa9.84□□□□□ -0.83
CDH13-206ENST00000562601 FHAD1B1AJZ9 1412 aa9.83□□□□□ -0.84
CDH13-206ENST00000562601 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
CDH13-206ENST00000562601 PDAP1Q13442 181 aaKnown RBP9.83□□□□□ -0.84
CDH13-206ENST00000562601 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
CDH13-206ENST00000562601 IGF1RP08069 1367 aa9.83□□□□□ -0.84
CDH13-206ENST00000562601 ARHGEF11O15085 1522 aa9.82□□□□□ -0.84
CDH13-206ENST00000562601 CLASP1Q7Z460 1538 aa9.82□□□□□ -0.84
CDH13-206ENST00000562601 RUSC2Q8N2Y8 1516 aa9.82□□□□□ -0.84
CDH13-206ENST00000562601 VGFO15240 615 aaPredicted RBP9.82□□□□□ -0.84
CDH13-206ENST00000562601 CEP170Q5SW79 1584 aa9.81□□□□□ -0.84
CDH13-206ENST00000562601 PELP1Q8IZL8 1130 aaKnown RBP9.81□□□□□ -0.84
CDH13-206ENST00000562601 RNF25Q96BH1 459 aaPredicted RBP9.8□□□□□ -0.84
CDH13-206ENST00000562601 RGL2O15211 777 aa9.79□□□□□ -0.84
CDH13-206ENST00000562601 PSEN1P49768 467 aa9.79□□□□□ -0.84
CDH13-206ENST00000562601 CYB5RLQ6IPT4 315 aa9.79□□□□□ -0.84
CDH13-206ENST00000562601 OTUD5Q96G74 571 aa9.78□□□□□ -0.84
CDH13-206ENST00000562601 CUL7Q14999 1698 aa9.77□□□□□ -0.84
CDH13-206ENST00000562601 CARMIL1Q5VZK9 1371 aa9.77□□□□□ -0.84
CDH13-206ENST00000562601 NUP160Q12769 1436 aa9.77□□□□□ -0.85
CDH13-206ENST00000562601 ASTLQ6HA08 431 aaPredicted RBP9.77□□□□□ -0.85
CDH13-206ENST00000562601 TMEM106CQ9BVX2 250 aa9.77□□□□□ -0.85
CDH13-206ENST00000562601 BMP2KQ9NSY1 1161 aaPredicted RBP9.77□□□□□ -0.85
CDH13-206ENST00000562601 TRPC6Q9Y210 931 aa9.77□□□□□ -0.85
CDH13-206ENST00000562601 TTLL13PA6NNM8 815 aa9.76□□□□□ -0.85
CDH13-206ENST00000562601 ARAP1Q96P48 1450 aa9.75□□□□□ -0.85
CDH13-206ENST00000562601 ATMINO43313 823 aaPredicted RBP9.75□□□□□ -0.85
CDH13-206ENST00000562601 ERCC6L2Q5T890 1561 aa9.75□□□□□ -0.85
CDH13-206ENST00000562601 GOLGA2Q08379 1002 aa9.73□□□□□ -0.85
CDH13-206ENST00000562601 FAM9AQ8IZU1 332 aaPredicted RBP9.73□□□□□ -0.85
CDH13-206ENST00000562601 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.72□□□□□ -0.85
CDH13-206ENST00000562601 ZFP91Q96JP5 570 aaPredicted RBP9.72□□□□□ -0.85
CDH13-206ENST00000562601 SHROOM2Q13796 1616 aa9.71□□□□□ -0.85
CDH13-206ENST00000562601 ATN1P54259 1190 aaPredicted RBP9.71□□□□□ -0.86
CDH13-206ENST00000562601 JPH4Q96JJ6 628 aa9.71□□□□□ -0.86
CDH13-206ENST00000562601 POTEJP0CG39 1038 aa9.7□□□□□ -0.86
CDH13-206ENST00000562601 TRIM35Q9UPQ4 493 aa9.7□□□□□ -0.86
CDH13-206ENST00000562601 PRG4Q92954 1404 aaPredicted RBP9.7□□□□□ -0.86
CDH13-206ENST00000562601 RAPGEF2Q9Y4G8 1499 aa9.7□□□□□ -0.86
CDH13-206ENST00000562601 STK25O00506 426 aa9.69□□□□□ -0.86
CDH13-206ENST00000562601 SLC39A7Q92504 469 aa9.69□□□□□ -0.86
CDH13-206ENST00000562601 KIAA0586Q9BVV6 1533 aa9.68□□□□□ -0.86
CDH13-206ENST00000562601 IER5LQ5T953 404 aa9.68□□□□□ -0.86
CDH13-206ENST00000562601 TTBK1Q5TCY1 1321 aaPredicted RBP9.67□□□□□ -0.86
CDH13-206ENST00000562601 MKRN3Q13064 507 aaKnown RBP9.67□□□□□ -0.86
CDH13-206ENST00000562601 STK24Q9Y6E0 443 aa9.67□□□□□ -0.86
CDH13-206ENST00000562601 C7P10643 843 aa9.66□□□□□ -0.86
CDH13-206ENST00000562601 BCL11BQ9C0K0 894 aaPredicted RBP9.66□□□□□ -0.86
CDH13-206ENST00000562601 CABP2Q9NPB3 220 aa9.66□□□□□ -0.86
CDH13-206ENST00000562601 HS6ST3Q8IZP7 471 aa9.65□□□□□ -0.86
CDH13-206ENST00000562601 IQGAP2Q13576 1575 aa9.65□□□□□ -0.86
CDH13-206ENST00000562601 CHGAP10645 457 aaKnown RBP9.64□□□□□ -0.87
CDH13-206ENST00000562601 METRNQ9UJH8 293 aa9.64□□□□□ -0.87
CDH13-206ENST00000562601 PRXQ9BXM0 1461 aa9.64□□□□□ -0.87
CDH13-206ENST00000562601 CTTNBP2Q8WZ74 1663 aa9.64□□□□□ -0.87
CDH13-206ENST00000562601 POTEFA5A3E0 1075 aa9.61□□□□□ -0.87
CDH13-206ENST00000562601 SEC24BO95487 1268 aa9.61□□□□□ -0.87
CDH13-206ENST00000562601 EEA1Q15075 1411 aa9.61□□□□□ -0.87
CDH13-206ENST00000562601 RANGAP1P46060 587 aaPredicted RBP9.6□□□□□ -0.87
CDH13-206ENST00000562601 SOX12O15370 315 aa9.59□□□□□ -0.87
CDH13-206ENST00000562601 EFCAB3Q8N7B9 438 aa9.59□□□□□ -0.87
CDH13-206ENST00000562601 DISP1Q96F81 1524 aa9.59□□□□□ -0.87
CDH13-206ENST00000562601 CARMIL2Q6F5E8 1435 aa9.58□□□□□ -0.88
CDH13-206ENST00000562601 PLCG2P16885 1265 aa9.58□□□□□ -0.88
CDH13-206ENST00000562601 PTPRGP23470 1445 aa9.57□□□□□ -0.88
CDH13-206ENST00000562601 UGGT2Q9NYU1 1516 aa9.57□□□□□ -0.88
CDH13-206ENST00000562601 P3H3Q8IVL6 736 aa9.57□□□□□ -0.88
CDH13-206ENST00000562601 TNIKQ9UKE5 1360 aa9.56□□□□□ -0.88
CDH13-206ENST00000562601 OCEL1Q9H607 264 aa9.56□□□□□ -0.88
CDH13-206ENST00000562601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDH13-206ENST00000562601 KIAA0556O60303 1618 aa9.56□□□□□ -0.88
CDH13-206ENST00000562601 ADCY10Q96PN6 1610 aa9.56□□□□□ -0.88
CDH13-206ENST00000562601 IRX5P78411 483 aaPredicted RBP9.55□□□□□ -0.88
CDH13-206ENST00000562601 KIF21BO75037 1637 aa9.55□□□□□ -0.88
CDH13-206ENST00000562601 UBTFP17480 764 aaKnown RBP9.54□□□□□ -0.88
CDH13-206ENST00000562601 NLRP6P59044 892 aa9.54□□□□□ -0.88
CDH13-206ENST00000562601 RYDENQ9NUL5 291 aaKnown RBP9.54□□□□□ -0.88
CDH13-206ENST00000562601 LCE2DQ5TA82 110 aaPredicted RBP9.53□□□□□ -0.88
CDH13-206ENST00000562601 ILDR1Q86SU0 546 aaPredicted RBP9.51□□□□□ -0.89
CDH13-206ENST00000562601 GOLGA3Q08378 1498 aa9.51□□□□□ -0.89
CDH13-206ENST00000562601 BBXQ8WY36 941 aaPredicted RBP9.5□□□□□ -0.89
CDH13-206ENST00000562601 COLQQ9Y215 455 aaPredicted RBP9.5□□□□□ -0.89
CDH13-206ENST00000562601 UACAQ9BZF9 1416 aa9.49□□□□□ -0.89
CDH13-206ENST00000562601 POTEMA6NI47 508 aa9.49□□□□□ -0.89
CDH13-206ENST00000562601 PHF8Q9UPP1 1060 aa9.49□□□□□ -0.89
CDH13-206ENST00000562601 KIF13AQ9H1H9 1805 aa9.49□□□□□ -0.89
CDH13-206ENST00000562601 PLB1Q6P1J6 1458 aa9.48□□□□□ -0.89
CDH13-206ENST00000562601 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
CDH13-206ENST00000562601 MAMSTRQ6ZN01 415 aa9.48□□□□□ -0.89
CDH13-206ENST00000562601 PDCD7Q8N8D1 485 aaKnown RBP9.48□□□□□ -0.89
CDH13-206ENST00000562601 MFRPQ9BY79 579 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms