RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 PSEN1P49768 467 aa10.56□□□□□ -0.72
CDH1-203ENST00000561751 ERICH6BQ5W0A0 696 aa10.56□□□□□ -0.72
CDH1-203ENST00000561751 FAM163AQ96GL9 167 aaPredicted RBP10.56□□□□□ -0.72
CDH1-203ENST00000561751 SMARCA4P51532 1647 aa10.54□□□□□ -0.72
CDH1-203ENST00000561751 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
CDH1-203ENST00000561751 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
CDH1-203ENST00000561751 SLAIN1Q8ND83 568 aa10.51□□□□□ -0.73
CDH1-203ENST00000561751 LAMC3Q9Y6N6 1575 aa10.51□□□□□ -0.73
CDH1-203ENST00000561751 PDAP1Q13442 181 aaKnown RBP10.5□□□□□ -0.73
CDH1-203ENST00000561751 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.73
CDH1-203ENST00000561751 BAZ1BQ9UIG0 1483 aaKnown RBP10.49□□□□□ -0.73
CDH1-203ENST00000561751 MKRN3Q13064 507 aaKnown RBP10.48□□□□□ -0.73
CDH1-203ENST00000561751 GOLGA2Q08379 1002 aa10.47□□□□□ -0.73
CDH1-203ENST00000561751 PEG3Q9GZU2 1588 aa10.47□□□□□ -0.73
CDH1-203ENST00000561751 BAZ1AQ9NRL2 1556 aaPredicted RBP10.47□□□□□ -0.73
CDH1-203ENST00000561751 KIF21AQ7Z4S6 1674 aa10.47□□□□□ -0.73
CDH1-203ENST00000561751 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
CDH1-203ENST00000561751 FANCIQ9NVI1 1328 aa10.45□□□□□ -0.74
CDH1-203ENST00000561751 MROH2BQ7Z745 1585 aa10.44□□□□□ -0.74
CDH1-203ENST00000561751 CABP2Q9NPB3 220 aa10.44□□□□□ -0.74
CDH1-203ENST00000561751 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH1-203ENST00000561751 PDS5BQ9NTI5 1447 aa10.42□□□□□ -0.74
CDH1-203ENST00000561751 ST18O60284 1047 aa10.41□□□□□ -0.74
CDH1-203ENST00000561751 DPY19L2Q6NUT2 758 aa10.41□□□□□ -0.74
CDH1-203ENST00000561751 UBE2Q2Q8WVN8 375 aa10.4□□□□□ -0.74
CDH1-203ENST00000561751 RNF25Q96BH1 459 aaPredicted RBP10.4□□□□□ -0.74
CDH1-203ENST00000561751 YTHDC1Q96MU7 727 aaKnown RBP10.4□□□□□ -0.74
CDH1-203ENST00000561751 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.4□□□□□ -0.74
CDH1-203ENST00000561751 WDR62O43379 1518 aa10.38□□□□□ -0.75
CDH1-203ENST00000561751 MRC2Q9UBG0 1479 aa10.38□□□□□ -0.75
CDH1-203ENST00000561751 RBM19Q9Y4C8 960 aaKnown RBP10.38□□□□□ -0.75
CDH1-203ENST00000561751 L3MBTL3Q96JM7 780 aaPredicted RBP10.37□□□□□ -0.75
CDH1-203ENST00000561751 RSF1Q96T23 1441 aaPredicted RBP10.37□□□□□ -0.75
CDH1-203ENST00000561751 PCDH10Q9P2E7 1040 aa10.37□□□□□ -0.75
CDH1-203ENST00000561751 EFCAB3Q8N7B9 438 aa10.34□□□□□ -0.75
CDH1-203ENST00000561751 C3orf67Q6ZVT6 689 aa10.33□□□□□ -0.76
CDH1-203ENST00000561751 CADPSQ9ULU8 1353 aa10.33□□□□□ -0.76
CDH1-203ENST00000561751 RIOK3O14730 519 aaKnown RBP10.31□□□□□ -0.76
CDH1-203ENST00000561751 WIZO95785 1651 aa10.29□□□□□ -0.76
CDH1-203ENST00000561751 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.29□□□□□ -0.76
CDH1-203ENST00000561751 CDAN1Q8IWY9 1227 aa10.29□□□□□ -0.76
CDH1-203ENST00000561751 ZFP91Q96JP5 570 aaPredicted RBP10.29□□□□□ -0.76
CDH1-203ENST00000561751 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
CDH1-203ENST00000561751 CEP164Q9UPV0 1460 aa10.28□□□□□ -0.76
CDH1-203ENST00000561751 SNPHO15079 494 aa10.27□□□□□ -0.77
CDH1-203ENST00000561751 VGFO15240 615 aaPredicted RBP10.26□□□□□ -0.77
CDH1-203ENST00000561751 TMEM121BQ9BXQ6 578 aaPredicted RBP10.25□□□□□ -0.77
CDH1-203ENST00000561751 MARVELD3Q96A59 401 aa10.24□□□□□ -0.77
CDH1-203ENST00000561751 FANCD2Q9BXW9 1451 aa10.23□□□□□ -0.77
CDH1-203ENST00000561751 DEKP35659 375 aaKnown RBP10.23□□□□□ -0.77
CDH1-203ENST00000561751 MS4A4AQ96JQ5 239 aa10.23□□□□□ -0.77
CDH1-203ENST00000561751 NEFLP07196 543 aa10.22□□□□□ -0.77
CDH1-203ENST00000561751 RIMBP3CA6NJZ7 1639 aa10.22□□□□□ -0.77
CDH1-203ENST00000561751 RIMBP3BA6NNM3 1639 aa10.22□□□□□ -0.77
CDH1-203ENST00000561751 RIMBP3Q9UFD9 1639 aa10.22□□□□□ -0.77
CDH1-203ENST00000561751 G3V3G9 751 aa10.2□□□□□ -0.78
CDH1-203ENST00000561751 SOX12O15370 315 aa10.2□□□□□ -0.78
CDH1-203ENST00000561751 PHF8Q9UPP1 1060 aa10.2□□□□□ -0.78
CDH1-203ENST00000561751 SLC24A1O60721 1099 aa10.19□□□□□ -0.78
CDH1-203ENST00000561751 ANO8Q9HCE9 1232 aaPredicted RBP10.19□□□□□ -0.78
CDH1-203ENST00000561751 HOXB3P14651 431 aaPredicted RBP10.18□□□□□ -0.78
CDH1-203ENST00000561751 TMEM92Q6UXU6 159 aa10.18□□□□□ -0.78
CDH1-203ENST00000561751 DAXXQ9UER7 740 aaPredicted RBP10.18□□□□□ -0.78
CDH1-203ENST00000561751 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
CDH1-203ENST00000561751 URB2Q14146 1524 aaKnown RBP10.17□□□□□ -0.78
CDH1-203ENST00000561751 CFTRP13569 1480 aa10.17□□□□□ -0.78
CDH1-203ENST00000561751 TNIKQ9UKE5 1360 aa10.17□□□□□ -0.78
CDH1-203ENST00000561751 PKD2Q13563 968 aa10.17□□□□□ -0.78
CDH1-203ENST00000561751 MICALL2Q8IY33 904 aa10.17□□□□□ -0.78
CDH1-203ENST00000561751 ARHGEF11O15085 1522 aa10.17□□□□□ -0.78
CDH1-203ENST00000561751 POTEB3A0JP26 581 aa10.16□□□□□ -0.78
CDH1-203ENST00000561751 POTEBQ6S5H4 581 aa10.16□□□□□ -0.78
CDH1-203ENST00000561751 BCL11BQ9C0K0 894 aaPredicted RBP10.16□□□□□ -0.78
CDH1-203ENST00000561751 ECM2O94769 699 aaPredicted RBP10.15□□□□□ -0.78
CDH1-203ENST00000561751 CDK11AQ9UQ88 783 aaPredicted RBP10.15□□□□□ -0.78
CDH1-203ENST00000561751 EEA1Q15075 1411 aa10.15□□□□□ -0.79
CDH1-203ENST00000561751 CCDC88BA6NC98 1476 aa10.13□□□□□ -0.79
CDH1-203ENST00000561751 RGL2O15211 777 aa10.13□□□□□ -0.79
CDH1-203ENST00000561751 EIF5BO60841 1220 aaKnown RBP10.13□□□□□ -0.79
CDH1-203ENST00000561751 EMP3P54852 163 aa10.13□□□□□ -0.79
CDH1-203ENST00000561751 FBXO22Q8NEZ5 403 aa10.13□□□□□ -0.79
CDH1-203ENST00000561751 C11orf95C9JLR9 678 aaPredicted RBP10.12□□□□□ -0.79
CDH1-203ENST00000561751 CCER2I3L3R5 266 aa10.12□□□□□ -0.79
CDH1-203ENST00000561751 STK24Q9Y6E0 443 aa10.12□□□□□ -0.79
CDH1-203ENST00000561751 HS3ST6Q96QI5 342 aa10.1□□□□□ -0.79
CDH1-203ENST00000561751 MFRPQ9BY79 579 aa10.1□□□□□ -0.79
CDH1-203ENST00000561751 ZNF608Q9ULD9 1512 aaPredicted RBP10.09□□□□□ -0.79
CDH1-203ENST00000561751 FAM205CA6NFA0 338 aa10.09□□□□□ -0.79
CDH1-203ENST00000561751 STK25O00506 426 aa10.09□□□□□ -0.79
CDH1-203ENST00000561751 NLRP6P59044 892 aa10.08□□□□□ -0.8
CDH1-203ENST00000561751 USP35Q9P2H5 1018 aa10.08□□□□□ -0.8
CDH1-203ENST00000561751 TAOK2Q9UL54 1235 aa10.08□□□□□ -0.8
CDH1-203ENST00000561751 IFT140Q96RY7 1462 aa10.08□□□□□ -0.8
CDH1-203ENST00000561751 CEP162Q5TB80 1403 aa10.07□□□□□ -0.8
CDH1-203ENST00000561751 HOXB1P14653 301 aaPredicted RBP10.06□□□□□ -0.8
CDH1-203ENST00000561751 SALL2Q9Y467 1007 aaPredicted RBP10.06□□□□□ -0.8
CDH1-203ENST00000561751 ARAP1Q96P48 1450 aa10.05□□□□□ -0.8
CDH1-203ENST00000561751 DOK7Q18PE1 504 aa10.05□□□□□ -0.8
CDH1-203ENST00000561751 SPNS2Q8IVW8 549 aa10.05□□□□□ -0.8
CDH1-203ENST00000561751 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms