RNA–Protein interactions for RNA: ENST00000561356.1

TM2D3-214, Transcript of TM2 domain containing 3, humanhuman

TSL 4

Gene TM2D3, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-214ENST00000561356 SETD1BQ9UPS6 1966 aaKnown RBP14.2□□□□□ -0.14
TM2D3-214ENST00000561356 FHOD3Q2V2M9 1422 aa14.19□□□□□ -0.14
TM2D3-214ENST00000561356 POTEAQ6S8J7 498 aa14.18□□□□□ -0.14
TM2D3-214ENST00000561356 DENND4BO75064 1496 aaPredicted RBP14.17□□□□□ -0.14
TM2D3-214ENST00000561356 EFCAB5A4FU69 1503 aa14.16□□□□□ -0.14
TM2D3-214ENST00000561356 CAMSAP1Q5T5Y3 1602 aa14.16□□□□□ -0.14
TM2D3-214ENST00000561356 C3P01024 1663 aa14.16□□□□□ -0.14
TM2D3-214ENST00000561356 HECW1Q76N89 1606 aa14.12□□□□□ -0.15
TM2D3-214ENST00000561356 NCKAP5LQ9HCH0 1330 aa14.11□□□□□ -0.15
TM2D3-214ENST00000561356 CARMIL1Q5VZK9 1371 aa14.09□□□□□ -0.15
TM2D3-214ENST00000561356 ARID3CA6NKF2 412 aa14.09□□□□□ -0.15
TM2D3-214ENST00000561356 ATP10BO94823 1461 aa14.07□□□□□ -0.16
TM2D3-214ENST00000561356 MAGI2Q86UL8 1455 aa14.06□□□□□ -0.16
TM2D3-214ENST00000561356 TOM1O60784 492 aa14.05□□□□□ -0.16
TM2D3-214ENST00000561356 UPF1Q92900 1129 aaKnown RBP eCLIP14.05□□□□□ -0.16
TM2D3-214ENST00000561356 C9orf84Q5VXU9 1444 aa14.04□□□□□ -0.16
TM2D3-214ENST00000561356 KIF27Q86VH2 1401 aa14.04□□□□□ -0.16
TM2D3-214ENST00000561356 TRAPPC8Q9Y2L5 1435 aa14.03□□□□□ -0.16
TM2D3-214ENST00000561356 TCOF1Q13428 1488 aaKnown RBP14.03□□□□□ -0.16
TM2D3-214ENST00000561356 ATP10AO60312 1499 aa14.02□□□□□ -0.16
TM2D3-214ENST00000561356 CFAP74Q9C0B2 1584 aa13.98□□□□□ -0.17
TM2D3-214ENST00000561356 CPS1P31327 1500 aa13.98□□□□□ -0.17
TM2D3-214ENST00000561356 PLA2R1Q13018 1463 aa13.98□□□□□ -0.17
TM2D3-214ENST00000561356 ZNF142P52746 1687 aaPredicted RBP13.96□□□□□ -0.17
TM2D3-214ENST00000561356 RAPGEF2Q9Y4G8 1499 aa13.96□□□□□ -0.17
TM2D3-214ENST00000561356 PTPRKQ15262 1439 aa13.94□□□□□ -0.18
TM2D3-214ENST00000561356 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
TM2D3-214ENST00000561356 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
TM2D3-214ENST00000561356 SHANK2Q9UPX8 1470 aa13.93□□□□□ -0.18
TM2D3-214ENST00000561356 SUPT6HQ7KZ85 1726 aaKnown RBP13.92□□□□□ -0.18
TM2D3-214ENST00000561356 NEURL4Q96JN8 1562 aa13.91□□□□□ -0.18
TM2D3-214ENST00000561356 PKD2Q13563 968 aa13.9□□□□□ -0.18
TM2D3-214ENST00000561356 VWDEQ8N2E2 1590 aa13.9□□□□□ -0.18
TM2D3-214ENST00000561356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.9□□□□□ -0.194e-8■■■■□ 20.7
TM2D3-214ENST00000561356 DIP2CQ9Y2E4 1556 aa13.89□□□□□ -0.19
TM2D3-214ENST00000561356 CEP170BQ9Y4F5 1589 aaPredicted RBP13.89□□□□□ -0.19
TM2D3-214ENST00000561356 SCAPERQ9BY12 1400 aa13.88□□□□□ -0.19
TM2D3-214ENST00000561356 CTTNBP2Q8WZ74 1663 aa13.87□□□□□ -0.19
TM2D3-214ENST00000561356 NPATQ14207 1427 aa13.87□□□□□ -0.19
TM2D3-214ENST00000561356 GOLGA3Q08378 1498 aa13.87□□□□□ -0.19
TM2D3-214ENST00000561356 RNF17Q9BXT8 1623 aaKnown RBP13.86□□□□□ -0.19
TM2D3-214ENST00000561356 REREQ9P2R6 1566 aa13.86□□□□□ -0.19
TM2D3-214ENST00000561356 STRCP1A6NGW2 1772 aa13.85□□□□□ -0.19
TM2D3-214ENST00000561356 ABCA6Q8N139 1617 aa13.85□□□□□ -0.19
TM2D3-214ENST00000561356 AGLP35573 1532 aa13.85□□□□□ -0.19
TM2D3-214ENST00000561356 SETBP1Q9Y6X0 1596 aa13.84□□□□□ -0.19
TM2D3-214ENST00000561356 LRRC7Q96NW7 1537 aa13.84□□□□□ -0.19
TM2D3-214ENST00000561356 POLR1AO95602 1720 aaPredicted RBP13.84□□□□□ -0.19
TM2D3-214ENST00000561356 MROH2AA6NES4 1674 aa13.82□□□□□ -0.2
TM2D3-214ENST00000561356 KDM5CP41229 1560 aa13.81□□□□□ -0.2
TM2D3-214ENST00000561356 RAPGEF6Q8TEU7 1601 aa13.79□□□□□ -0.2
TM2D3-214ENST00000561356 NUP153P49790 1475 aaKnown RBP13.79□□□□□ -0.2
TM2D3-214ENST00000561356 IFFO2Q5TF58 517 aa13.78□□□□□ -0.2
TM2D3-214ENST00000561356 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
TM2D3-214ENST00000561356 CNTLNQ9NXG0 1405 aa13.78□□□□□ -0.2
TM2D3-214ENST00000561356 DNMT1P26358 1616 aaKnown RBP13.77□□□□□ -0.21
TM2D3-214ENST00000561356 SYNMO15061 1565 aa13.74□□□□□ -0.21
TM2D3-214ENST00000561356 ZMYM3Q14202 1370 aa13.73□□□□□ -0.21
TM2D3-214ENST00000561356 ZNF518AQ6AHZ1 1483 aa13.73□□□□□ -0.21
TM2D3-214ENST00000561356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
TM2D3-214ENST00000561356 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
TM2D3-214ENST00000561356 ESF1Q9H501 851 aaKnown RBP13.71□□□□□ -0.21
TM2D3-214ENST00000561356 XIRP1Q702N8 1843 aaKnown RBP13.71□□□□□ -0.22
TM2D3-214ENST00000561356 CLTCQ00610 1675 aaKnown RBP13.7□□□□□ -0.22
TM2D3-214ENST00000561356 P3H3Q8IVL6 736 aa13.7□□□□□ -0.22
TM2D3-214ENST00000561356 PLCH2O75038 1416 aa13.7□□□□□ -0.22
TM2D3-214ENST00000561356 A2ML1A8K2U0 1454 aa13.69□□□□□ -0.22
TM2D3-214ENST00000561356 LRP6O75581 1613 aa13.69□□□□□ -0.22
TM2D3-214ENST00000561356 AFAP1Q8N556 730 aa13.69□□□□□ -0.22
TM2D3-214ENST00000561356 EP400Q96L91 3159 aa13.68□□□□□ -0.22
TM2D3-214ENST00000561356 MLH3Q9UHC1 1453 aa13.65□□□□□ -0.22
TM2D3-214ENST00000561356 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
TM2D3-214ENST00000561356 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
TM2D3-214ENST00000561356 CDK12Q9NYV4 1490 aaPredicted RBP13.64□□□□□ -0.23
TM2D3-214ENST00000561356 FOXD1Q16676 465 aa13.64□□□□□ -0.23
TM2D3-214ENST00000561356 SAMD9Q5K651 1589 aa13.63□□□□□ -0.23
TM2D3-214ENST00000561356 RBM33Q96EV2 1170 aaKnown RBP13.63□□□□□ -0.23
TM2D3-214ENST00000561356 IQGAP1P46940 1657 aa13.63□□□□□ -0.23
TM2D3-214ENST00000561356 MED14O60244 1454 aa13.62□□□□□ -0.23
TM2D3-214ENST00000561356 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
TM2D3-214ENST00000561356 CDK13Q14004 1512 aaKnown RBP13.62□□□□□ -0.23
TM2D3-214ENST00000561356 KIDINS220Q9ULH0 1771 aa13.62□□□□□ -0.23
TM2D3-214ENST00000561356 NPHP4O75161 1426 aaPredicted RBP13.62□□□□□ -0.23
TM2D3-214ENST00000561356 ITSN2Q9NZM3 1697 aa13.6□□□□□ -0.23
TM2D3-214ENST00000561356 PLEKHD1A6NEE1 506 aa13.6□□□□□ -0.23
TM2D3-214ENST00000561356 RGS12O14924 1447 aa13.6□□□□□ -0.23
TM2D3-214ENST00000561356 DEPDC5O75140 1603 aa13.6□□□□□ -0.23
TM2D3-214ENST00000561356 LRP5O75197 1615 aa13.6□□□□□ -0.23
TM2D3-214ENST00000561356 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
TM2D3-214ENST00000561356 ABCC1P33527 1531 aa13.59□□□□□ -0.23
TM2D3-214ENST00000561356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.58□□□□□ -0.24
TM2D3-214ENST00000561356 ZC3H13Q5T200 1668 aaKnown RBP13.56□□□□□ -0.24
TM2D3-214ENST00000561356 MYT1LQ9UL68 1186 aa13.56□□□□□ -0.24
TM2D3-214ENST00000561356 RXRBP28702 533 aa13.55□□□□□ -0.24
TM2D3-214ENST00000561356 ZNF772Q68DY9 489 aaPredicted RBP13.55□□□□□ -0.24
TM2D3-214ENST00000561356 PHLPP1O60346 1717 aa13.55□□□□□ -0.24
TM2D3-214ENST00000561356 COL16A1Q07092 1604 aaPredicted RBP13.54□□□□□ -0.24
TM2D3-214ENST00000561356 EFCAB2Q5VUJ9 269 aa13.54□□□□□ -0.24
TM2D3-214ENST00000561356 JCADQ9P266 1359 aa13.54□□□□□ -0.24
TM2D3-214ENST00000561356 KIF14Q15058 1648 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms