RNA–Protein interactions for RNA: ENST00000561317.1

SPRED1-203, Transcript of sprouty related EVH1 domain containing 1, humanhuman

TSL 4

Gene SPRED1, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-203ENST00000561317 ARID3CA6NKF2 412 aa11.22□□□□□ -0.61
SPRED1-203ENST00000561317 ARID4BQ4LE39 1312 aaPredicted RBP11.22□□□□□ -0.61
SPRED1-203ENST00000561317 KIF21BO75037 1637 aa11.21□□□□□ -0.61
SPRED1-203ENST00000561317 ZNF692Q9BU19 519 aaPredicted RBP11.21□□□□□ -0.61
SPRED1-203ENST00000561317 LMTK3Q96Q04 1460 aa11.2□□□□□ -0.62
SPRED1-203ENST00000561317 MAGI3Q5TCQ9 1506 aa11.19□□□□□ -0.62
SPRED1-203ENST00000561317 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
SPRED1-203ENST00000561317 RAPGEF3O95398 923 aa11.18□□□□□ -0.62
SPRED1-203ENST00000561317 PROM2Q8N271 834 aa11.18□□□□□ -0.62
SPRED1-203ENST00000561317 PTPRMP28827 1452 aa11.18□□□□□ -0.62
SPRED1-203ENST00000561317 UGGT2Q9NYU1 1516 aa11.16□□□□□ -0.62
SPRED1-203ENST00000561317 HSPA2P54652 639 aa11.16□□□□□ -0.62
SPRED1-203ENST00000561317 KIAA0556O60303 1618 aa11.16□□□□□ -0.62
SPRED1-203ENST00000561317 CFAP43Q8NDM7 1665 aa11.15□□□□□ -0.62
SPRED1-203ENST00000561317 RAPGEF2Q9Y4G8 1499 aa11.15□□□□□ -0.62
SPRED1-203ENST00000561317 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
SPRED1-203ENST00000561317 SSUH2Q9Y2M2 353 aa11.14□□□□□ -0.63
SPRED1-203ENST00000561317 ILDR2Q71H61 639 aa11.13□□□□□ -0.63
SPRED1-203ENST00000561317 P3H3Q8IVL6 736 aa11.13□□□□□ -0.63
SPRED1-203ENST00000561317 CERKQ8TCT0 537 aa11.13□□□□□ -0.63
SPRED1-203ENST00000561317 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
SPRED1-203ENST00000561317 ADAMTSL3P82987 1691 aa11.11□□□□□ -0.63
SPRED1-203ENST00000561317 ARAP3Q8WWN8 1544 aa11.11□□□□□ -0.63
SPRED1-203ENST00000561317 PRXQ9BXM0 1461 aa11.11□□□□□ -0.63
SPRED1-203ENST00000561317 PCF11O94913 1555 aaKnown RBP11.1□□□□□ -0.63
SPRED1-203ENST00000561317 SOCS7O14512 581 aa11.09□□□□□ -0.63
SPRED1-203ENST00000561317 PIP4P2Q8N4L2 257 aa11.09□□□□□ -0.63
SPRED1-203ENST00000561317 ABCA8O94911 1581 aa11.08□□□□□ -0.64
SPRED1-203ENST00000561317 GOLGA3Q08378 1498 aa11.08□□□□□ -0.64
SPRED1-203ENST00000561317 LOC105371045A0A1W2PR82 267 aa11.08□□□□□ -0.64
SPRED1-203ENST00000561317 SPDYE1Q8NFV5 336 aaPredicted RBP11.08□□□□□ -0.64
SPRED1-203ENST00000561317 MADDQ8WXG6 1647 aa11.07□□□□□ -0.64
SPRED1-203ENST00000561317 MLECQ14165 292 aa11.07□□□□□ -0.64
SPRED1-203ENST00000561317 BCORL1Q5H9F3 1711 aa11.06□□□□□ -0.64
SPRED1-203ENST00000561317 PHLDB1Q86UU1 1377 aa11.06□□□□□ -0.64
SPRED1-203ENST00000561317 UBTFP17480 764 aaKnown RBP11.05□□□□□ -0.64
SPRED1-203ENST00000561317 ATP10BO94823 1461 aa11.05□□□□□ -0.64
SPRED1-203ENST00000561317 RIMS1Q86UR5 1692 aaKnown RBP11.04□□□□□ -0.64
SPRED1-203ENST00000561317 CTTNBP2Q8WZ74 1663 aa11.02□□□□□ -0.64
SPRED1-203ENST00000561317 RANGAP1P46060 587 aaPredicted RBP11.02□□□□□ -0.65
SPRED1-203ENST00000561317 NEO1Q92859 1461 aa11□□□□□ -0.65
SPRED1-203ENST00000561317 ABCA9Q8IUA7 1624 aa11□□□□□ -0.65
SPRED1-203ENST00000561317 FXR2P51116 673 aaKnown RBP eCLIP11□□□□□ -0.65
SPRED1-203ENST00000561317 POGZQ7Z3K3 1410 aa10.99□□□□□ -0.65
SPRED1-203ENST00000561317 DENND4BO75064 1496 aaPredicted RBP10.98□□□□□ -0.65
SPRED1-203ENST00000561317 PLEKHD1A6NEE1 506 aa10.97□□□□□ -0.65
SPRED1-203ENST00000561317 CEBPAP49715 358 aaPredicted RBP10.97□□□□□ -0.65
SPRED1-203ENST00000561317 FRMPD1Q5SYB0 1578 aa10.97□□□□□ -0.65
SPRED1-203ENST00000561317 AKNAQ7Z591 1439 aa10.96□□□□□ -0.65
SPRED1-203ENST00000561317 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
SPRED1-203ENST00000561317 HAX1O00165 279 aa10.95□□□□□ -0.66
SPRED1-203ENST00000561317 FANCAO15360 1455 aa10.94□□□□□ -0.66
SPRED1-203ENST00000561317 ARHGEF40Q8TER5 1519 aa10.94□□□□□ -0.66
SPRED1-203ENST00000561317 YEATS2Q9ULM3 1422 aa10.93□□□□□ -0.66
SPRED1-203ENST00000561317 PRKAR2AP13861 404 aaKnown RBP10.93□□□□□ -0.66
SPRED1-203ENST00000561317 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
SPRED1-203ENST00000561317 MYT1LQ9UL68 1186 aa10.92□□□□□ -0.66
SPRED1-203ENST00000561317 RAPGEF6Q8TEU7 1601 aa10.91□□□□□ -0.66
SPRED1-203ENST00000561317 FHOD3Q2V2M9 1422 aa10.91□□□□□ -0.66
SPRED1-203ENST00000561317 SPATA31D1Q6ZQQ2 1576 aa10.9□□□□□ -0.66
SPRED1-203ENST00000561317 ZFYVE16Q7Z3T8 1539 aa10.9□□□□□ -0.66
SPRED1-203ENST00000561317 RICTORQ6R327 1708 aa10.9□□□□□ -0.66
SPRED1-203ENST00000561317 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.67
SPRED1-203ENST00000561317 SIGLEC1Q9BZZ2 1709 aa10.89□□□□□ -0.67
SPRED1-203ENST00000561317 CEP162Q5TB80 1403 aa10.89□□□□□ -0.67
SPRED1-203ENST00000561317 NUP153P49790 1475 aaKnown RBP10.87□□□□□ -0.67
SPRED1-203ENST00000561317 CLIP1P30622 1438 aa10.87□□□□□ -0.67
SPRED1-203ENST00000561317 SCAPERQ9BY12 1400 aa10.87□□□□□ -0.67
SPRED1-203ENST00000561317 ATP1B4Q9UN42 357 aaPredicted RBP10.87□□□□□ -0.67
SPRED1-203ENST00000561317 EFCAB5A4FU69 1503 aa10.87□□□□□ -0.67
SPRED1-203ENST00000561317 HECW1Q76N89 1606 aa10.86□□□□□ -0.67
SPRED1-203ENST00000561317 STRCQ7RTU9 1775 aa10.85□□□□□ -0.67
SPRED1-203ENST00000561317 UHRF1BP1Q6BDS2 1440 aa10.85□□□□□ -0.67
SPRED1-203ENST00000561317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.85□□□□□ -0.67
SPRED1-203ENST00000561317 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
SPRED1-203ENST00000561317 ATP10AO60312 1499 aa10.85□□□□□ -0.67
SPRED1-203ENST00000561317 MAGI2Q86UL8 1455 aa10.85□□□□□ -0.67
SPRED1-203ENST00000561317 TTC37Q6PGP7 1564 aa10.85□□□□□ -0.67
SPRED1-203ENST00000561317 CFAP74Q9C0B2 1584 aa10.85□□□□□ -0.67
SPRED1-203ENST00000561317 PREX1Q8TCU6 1659 aa10.85□□□□□ -0.67
SPRED1-203ENST00000561317 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
SPRED1-203ENST00000561317 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
SPRED1-203ENST00000561317 ZMYM4Q5VZL5 1548 aa10.84□□□□□ -0.67
SPRED1-203ENST00000561317 SETD1BQ9UPS6 1966 aaKnown RBP10.83□□□□□ -0.68
SPRED1-203ENST00000561317 VASPP50552 380 aaPredicted RBP10.83□□□□□ -0.68
SPRED1-203ENST00000561317 EFCAB2Q5VUJ9 269 aa10.83□□□□□ -0.68
SPRED1-203ENST00000561317 SP7Q8TDD2 431 aaPredicted RBP10.83□□□□□ -0.68
SPRED1-203ENST00000561317 SAMD9Q5K651 1589 aa10.82□□□□□ -0.68
SPRED1-203ENST00000561317 ARHGAP35Q9NRY4 1499 aa10.82□□□□□ -0.68
SPRED1-203ENST00000561317 UBAP1LF5GYI3 381 aa10.82□□□□□ -0.68
SPRED1-203ENST00000561317 AFAP1Q8N556 730 aa10.82□□□□□ -0.68
SPRED1-203ENST00000561317 ARHGEF12Q9NZN5 1544 aa10.82□□□□□ -0.68
SPRED1-203ENST00000561317 C9orf84Q5VXU9 1444 aa10.82□□□□□ -0.68
SPRED1-203ENST00000561317 PTPRTO14522 1441 aa10.81□□□□□ -0.68
SPRED1-203ENST00000561317 PLCH2O75038 1416 aa10.79□□□□□ -0.68
SPRED1-203ENST00000561317 NCKAP5LQ9HCH0 1330 aa10.78□□□□□ -0.68
SPRED1-203ENST00000561317 CDK13Q14004 1512 aaKnown RBP10.77□□□□□ -0.69
SPRED1-203ENST00000561317 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
SPRED1-203ENST00000561317 ZNF335Q9H4Z2 1342 aaPredicted RBP10.76□□□□□ -0.69
SPRED1-203ENST00000561317 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms