RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.36■■□□□ 1.65
HDDC3-206ENST00000561036 ABCC5O15440 1437 aa25.36■■□□□ 1.65
HDDC3-206ENST00000561036 NAIPQ13075 1403 aa25.35■■□□□ 1.65
HDDC3-206ENST00000561036 ZNF644Q9H582 1327 aaPredicted RBP25.35■■□□□ 1.65
HDDC3-206ENST00000561036 ACIN1Q9UKV3 1341 aaKnown RBP25.32■■□□□ 1.64
HDDC3-206ENST00000561036 TTC37Q6PGP7 1564 aa25.31■■□□□ 1.64
HDDC3-206ENST00000561036 WDR7Q9Y4E6 1490 aa25.31■■□□□ 1.64
HDDC3-206ENST00000561036 GCC2Q8IWJ2 1684 aa25.31■■□□□ 1.64
HDDC3-206ENST00000561036 CDC42BPBQ9Y5S2 1711 aa25.29■■□□□ 1.64
HDDC3-206ENST00000561036 MYO5CQ9NQX4 1742 aa25.29■■□□□ 1.64
HDDC3-206ENST00000561036 ZNF777Q9ULD5 760 aaPredicted RBP25.27■■□□□ 1.64
HDDC3-206ENST00000561036 ARHGEF5Q12774 1597 aa25.27■■□□□ 1.64
HDDC3-206ENST00000561036 NPM1P06748 294 aaKnown RBP eCLIP25.26■■□□□ 1.63
HDDC3-206ENST00000561036 SHANK2Q9UPX8 1470 aa25.26■■□□□ 1.63
HDDC3-206ENST00000561036 CROCC2H7BZ55 1655 aa25.26■■□□□ 1.63
HDDC3-206ENST00000561036 RSPH4AQ5TD94 716 aa25.25■■□□□ 1.63
HDDC3-206ENST00000561036 KCNH8Q96L42 1107 aa25.25■■□□□ 1.63
HDDC3-206ENST00000561036 PLCH2O75038 1416 aa25.25■■□□□ 1.63
HDDC3-206ENST00000561036 ARAP3Q8WWN8 1544 aa25.24■■□□□ 1.63
HDDC3-206ENST00000561036 ADGRL2O95490 1459 aa25.24■■□□□ 1.63
HDDC3-206ENST00000561036 PLEKHH2Q8IVE3 1493 aa25.24■■□□□ 1.63
HDDC3-206ENST00000561036 CHIC2Q9UKJ5 165 aa25.24■■□□□ 1.63
HDDC3-206ENST00000561036 ARHGAP5Q13017 1502 aa25.23■■□□□ 1.63
HDDC3-206ENST00000561036 ADGBQ8N7X0 1667 aa25.23■■□□□ 1.63
HDDC3-206ENST00000561036 SAMD9LQ8IVG5 1584 aa25.22■■□□□ 1.63
HDDC3-206ENST00000561036 ASXL2Q76L83 1435 aa25.22■■□□□ 1.63
HDDC3-206ENST00000561036 RRP7BPQ9NSQ0 103 aa25.21■■□□□ 1.63
HDDC3-206ENST00000561036 KIAA1107Q9UPP5 1409 aa25.2■■□□□ 1.63
HDDC3-206ENST00000561036 MBD5Q9P267 1494 aa25.2■■□□□ 1.62
HDDC3-206ENST00000561036 ABCA9Q8IUA7 1624 aa25.18■■□□□ 1.62
HDDC3-206ENST00000561036 NCOA1Q15788 1441 aa25.18■■□□□ 1.62
HDDC3-206ENST00000561036 EFCAB2Q5VUJ9 269 aa25.17■■□□□ 1.62
HDDC3-206ENST00000561036 ANKRD30AQ9BXX3 1397 aa25.17■■□□□ 1.62
HDDC3-206ENST00000561036 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
HDDC3-206ENST00000561036 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
HDDC3-206ENST00000561036 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
HDDC3-206ENST00000561036 CCDC141Q6ZP82 1450 aa25.15■■□□□ 1.62
HDDC3-206ENST00000561036 MAPKBP1O60336 1514 aa25.15■■□□□ 1.62
HDDC3-206ENST00000561036 C9orf84Q5VXU9 1444 aa25.14■■□□□ 1.62
HDDC3-206ENST00000561036 TSPY4P0CV99 314 aa25.14■■□□□ 1.62
HDDC3-206ENST00000561036 TSPY10P0CW01 314 aa25.14■■□□□ 1.62
HDDC3-206ENST00000561036 HNRNPMP52272 730 aaKnown RBP eCLIP25.11■■□□□ 1.61
HDDC3-206ENST00000561036 MAST1Q9Y2H9 1570 aa25.1■■□□□ 1.61
HDDC3-206ENST00000561036 SYCP2Q9BX26 1530 aa25.09■■□□□ 1.61
HDDC3-206ENST00000561036 KDM6BO15054 1643 aa25.08■■□□□ 1.6
HDDC3-206ENST00000561036 ABCC1P33527 1531 aa25.07■■□□□ 1.6
HDDC3-206ENST00000561036 CYB5RLQ6IPT4 315 aa25.03■■□□□ 1.6
HDDC3-206ENST00000561036 FANCAO15360 1455 aa25.01■■□□□ 1.59
HDDC3-206ENST00000561036 ARHGEF12Q9NZN5 1544 aa25.01■■□□□ 1.59
HDDC3-206ENST00000561036 ANKRD50Q9ULJ7 1429 aa25■■□□□ 1.59
HDDC3-206ENST00000561036 TRIM52Q96A61 297 aa24.99■■□□□ 1.59
HDDC3-206ENST00000561036 TIMELESSQ9UNS1 1208 aa24.99■■□□□ 1.59
HDDC3-206ENST00000561036 KIF15Q9NS87 1388 aa24.98■■□□□ 1.59
HDDC3-206ENST00000561036 PLXNC1O60486 1568 aa24.97■■□□□ 1.59
HDDC3-206ENST00000561036 CFAP74Q9C0B2 1584 aa24.96■■□□□ 1.59
HDDC3-206ENST00000561036 RTEL1-TNFRSF6BF6WH68 1400 aa24.94■■□□□ 1.58
HDDC3-206ENST00000561036 CD109Q6YHK3 1445 aa24.94■■□□□ 1.58
HDDC3-206ENST00000561036 MPHOSPH9Q99550 1183 aa24.93■■□□□ 1.58
HDDC3-206ENST00000561036 TRAPPC8Q9Y2L5 1435 aa24.92■■□□□ 1.58
HDDC3-206ENST00000561036 GLI2P10070 1586 aa24.91■■□□□ 1.58
HDDC3-206ENST00000561036 DENND4BO75064 1496 aaPredicted RBP24.89■■□□□ 1.58
HDDC3-206ENST00000561036 ADGRL1O94910 1474 aa24.89■■□□□ 1.58
HDDC3-206ENST00000561036 DUOX2Q9NRD8 1548 aa24.88■■□□□ 1.57
HDDC3-206ENST00000561036 KDM5DQ9BY66 1539 aa24.87■■□□□ 1.57
HDDC3-206ENST00000561036 PZPP20742 1482 aa24.87■■□□□ 1.57
HDDC3-206ENST00000561036 SCAPERQ9BY12 1400 aa24.86■■□□□ 1.57
HDDC3-206ENST00000561036 SPAG9O60271 1321 aaKnown RBP24.86■■□□□ 1.57
HDDC3-206ENST00000561036 SIN3AQ96ST3 1273 aa24.85■■□□□ 1.57
HDDC3-206ENST00000561036 NEO1Q92859 1461 aa24.84■■□□□ 1.57
HDDC3-206ENST00000561036 SLC4A1APQ9BWU0 796 aaKnown RBP24.83■■□□□ 1.57
HDDC3-206ENST00000561036 ERBINQ96RT1 1412 aa24.83■■□□□ 1.57
HDDC3-206ENST00000561036 ZFYVE16Q7Z3T8 1539 aa24.82■■□□□ 1.56
HDDC3-206ENST00000561036 MAP3K4Q9Y6R4 1608 aa24.82■■□□□ 1.56
HDDC3-206ENST00000561036 NEUROD1Q13562 356 aa24.81■■□□□ 1.56
HDDC3-206ENST00000561036 INO80Q9ULG1 1556 aaPredicted RBP24.8■■□□□ 1.56
HDDC3-206ENST00000561036 AFAP1Q8N556 730 aa24.8■■□□□ 1.56
HDDC3-206ENST00000561036 ZNF518AQ6AHZ1 1483 aa24.79■■□□□ 1.56
HDDC3-206ENST00000561036 NUP155O75694 1391 aa24.79■■□□□ 1.56
HDDC3-206ENST00000561036 ANKRD30BQ9BXX2 1392 aa24.79■■□□□ 1.56
HDDC3-206ENST00000561036 ATP7AQ04656 1500 aa24.78■■□□□ 1.56
HDDC3-206ENST00000561036 UNC13BO14795 1591 aa24.78■■□□□ 1.56
HDDC3-206ENST00000561036 DIP2BQ9P265 1576 aa24.76■■□□□ 1.55
HDDC3-206ENST00000561036 TONSLQ96HA7 1378 aa24.75■■□□□ 1.55
HDDC3-206ENST00000561036 POGZQ7Z3K3 1410 aa24.74■■□□□ 1.55
HDDC3-206ENST00000561036 KDM5CP41229 1560 aa24.72■■□□□ 1.55
HDDC3-206ENST00000561036 MAGI2Q86UL8 1455 aa24.71■■□□□ 1.55
HDDC3-206ENST00000561036 ZNF316A6NFI3 1004 aaPredicted RBP24.71■■□□□ 1.55
HDDC3-206ENST00000561036 MLH3Q9UHC1 1453 aa24.7■■□□□ 1.54
HDDC3-206ENST00000561036 PPP1R15AO75807 674 aaPredicted RBP24.69■■□□□ 1.54
HDDC3-206ENST00000561036 PKD2Q13563 968 aa24.69■■□□□ 1.54
HDDC3-206ENST00000561036 FAM135AQ9P2D6 1515 aa24.69■■□□□ 1.54
HDDC3-206ENST00000561036 FAM69CQ0P6D2 419 aa24.68■■□□□ 1.54
HDDC3-206ENST00000561036 RPRD2Q5VT52 1461 aaKnown RBP24.68■■□□□ 1.54
HDDC3-206ENST00000561036 IQGAP3Q86VI3 1631 aa24.68■■□□□ 1.54
HDDC3-206ENST00000561036 FOXD1Q16676 465 aa24.66■■□□□ 1.54
HDDC3-206ENST00000561036 KIDINS220Q9ULH0 1771 aa24.66■■□□□ 1.54
HDDC3-206ENST00000561036 DHX29Q7Z478 1369 aaKnown RBP24.66■■□□□ 1.54
HDDC3-206ENST00000561036 EIF2AK4Q9P2K8 1649 aaKnown RBP24.65■■□□□ 1.54
HDDC3-206ENST00000561036 HECW2Q9P2P5 1572 aa24.63■■□□□ 1.53
HDDC3-206ENST00000561036 TEX14Q8IWB6 1497 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms