RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 WDR7Q9Y4E6 1490 aa12.31□□□□□ -0.44
GABPB1-211ENST00000561010 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
GABPB1-211ENST00000561010 SAMD9Q5K651 1589 aa12.27□□□□□ -0.44
GABPB1-211ENST00000561010 KCNH8Q96L42 1107 aa12.27□□□□□ -0.45
GABPB1-211ENST00000561010 RAPGEF6Q8TEU7 1601 aa12.26□□□□□ -0.45
GABPB1-211ENST00000561010 RANGAP1P46060 587 aaPredicted RBP12.25□□□□□ -0.45
GABPB1-211ENST00000561010 FAM9AQ8IZU1 332 aaPredicted RBP12.25□□□□□ -0.45
GABPB1-211ENST00000561010 ADGRL1O94910 1474 aa12.25□□□□□ -0.45
GABPB1-211ENST00000561010 TEX14Q8IWB6 1497 aa12.25□□□□□ -0.45
GABPB1-211ENST00000561010 KIF21BO75037 1637 aa12.23□□□□□ -0.45
GABPB1-211ENST00000561010 ATP10BO94823 1461 aa12.22□□□□□ -0.45
GABPB1-211ENST00000561010 FKBP8Q14318 412 aa12.22□□□□□ -0.45
GABPB1-211ENST00000561010 CD109Q6YHK3 1445 aa12.21□□□□□ -0.45
GABPB1-211ENST00000561010 ABCA9Q8IUA7 1624 aa12.19□□□□□ -0.46
GABPB1-211ENST00000561010 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
GABPB1-211ENST00000561010 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
GABPB1-211ENST00000561010 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
GABPB1-211ENST00000561010 MAGI3Q5TCQ9 1506 aa12.19□□□□□ -0.46
GABPB1-211ENST00000561010 FHOD3Q2V2M9 1422 aa12.19□□□□□ -0.46
GABPB1-211ENST00000561010 NUP153P49790 1475 aaKnown RBP12.15□□□□□ -0.46
GABPB1-211ENST00000561010 EEA1Q15075 1411 aa12.14□□□□□ -0.47
GABPB1-211ENST00000561010 SSUH2Q9Y2M2 353 aa12.13□□□□□ -0.47
GABPB1-211ENST00000561010 LRRIQ1Q96JM4 1722 aa12.13□□□□□ -0.47
GABPB1-211ENST00000561010 FRMPD1Q5SYB0 1578 aa12.13□□□□□ -0.47
GABPB1-211ENST00000561010 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
GABPB1-211ENST00000561010 PRKAR2AP13861 404 aaKnown RBP12.12□□□□□ -0.47
GABPB1-211ENST00000561010 TTC37Q6PGP7 1564 aa12.11□□□□□ -0.47
GABPB1-211ENST00000561010 RICTORQ6R327 1708 aa12.11□□□□□ -0.47
GABPB1-211ENST00000561010 CDK13Q14004 1512 aaKnown RBP12.11□□□□□ -0.47
GABPB1-211ENST00000561010 ARAP3Q8WWN8 1544 aa12.11□□□□□ -0.47
GABPB1-211ENST00000561010 EFCAB5A4FU69 1503 aa12.09□□□□□ -0.47
GABPB1-211ENST00000561010 C19orf67A6NJJ6 358 aa12.08□□□□□ -0.48
GABPB1-211ENST00000561010 SIGLEC1Q9BZZ2 1709 aa12.08□□□□□ -0.48
GABPB1-211ENST00000561010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.07□□□□□ -0.48
GABPB1-211ENST00000561010 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
GABPB1-211ENST00000561010 RAPGEF3O95398 923 aa12.07□□□□□ -0.48
GABPB1-211ENST00000561010 ADAMTSL3P82987 1691 aa12.06□□□□□ -0.48
GABPB1-211ENST00000561010 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
GABPB1-211ENST00000561010 MYO5CQ9NQX4 1742 aa12.05□□□□□ -0.48
GABPB1-211ENST00000561010 MADDQ8WXG6 1647 aa12.04□□□□□ -0.48
GABPB1-211ENST00000561010 RIMS1Q86UR5 1692 aaKnown RBP12.04□□□□□ -0.48
GABPB1-211ENST00000561010 NEO1Q92859 1461 aa12.04□□□□□ -0.48
GABPB1-211ENST00000561010 CFAP74Q9C0B2 1584 aa12.04□□□□□ -0.48
GABPB1-211ENST00000561010 KIF14Q15058 1648 aa12.04□□□□□ -0.48
GABPB1-211ENST00000561010 UBTFP17480 764 aaKnown RBP12.03□□□□□ -0.48
GABPB1-211ENST00000561010 CLEC11AQ9Y240 323 aa12.03□□□□□ -0.48
GABPB1-211ENST00000561010 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.48
GABPB1-211ENST00000561010 HECW1Q76N89 1606 aa12.02□□□□□ -0.49
GABPB1-211ENST00000561010 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
GABPB1-211ENST00000561010 ARHGEF40Q8TER5 1519 aa12.01□□□□□ -0.49
GABPB1-211ENST00000561010 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
GABPB1-211ENST00000561010 ATP1B4Q9UN42 357 aaPredicted RBP12.01□□□□□ -0.49
GABPB1-211ENST00000561010 FANCAO15360 1455 aa12.01□□□□□ -0.49
GABPB1-211ENST00000561010 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
GABPB1-211ENST00000561010 AKNAQ7Z591 1439 aa11.99□□□□□ -0.49
GABPB1-211ENST00000561010 FER1L4A9Z1Z3 1794 aa11.98□□□□□ -0.49
GABPB1-211ENST00000561010 CDC42BPBQ9Y5S2 1711 aa11.98□□□□□ -0.49
GABPB1-211ENST00000561010 PHLDB1Q86UU1 1377 aa11.98□□□□□ -0.49
GABPB1-211ENST00000561010 PCF11O94913 1555 aaKnown RBP11.97□□□□□ -0.49
GABPB1-211ENST00000561010 DENND4BO75064 1496 aaPredicted RBP11.97□□□□□ -0.49
GABPB1-211ENST00000561010 PTPRMP28827 1452 aa11.97□□□□□ -0.49
GABPB1-211ENST00000561010 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
GABPB1-211ENST00000561010 YEATS2Q9ULM3 1422 aa11.96□□□□□ -0.49
GABPB1-211ENST00000561010 ARID4BQ4LE39 1312 aaPredicted RBP11.96□□□□□ -0.49
GABPB1-211ENST00000561010 GABBR2O75899 941 aa11.96□□□□□ -0.49
GABPB1-211ENST00000561010 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.5
GABPB1-211ENST00000561010 ILDR1Q86SU0 546 aaPredicted RBP11.95□□□□□ -0.5
GABPB1-211ENST00000561010 ZFYVE16Q7Z3T8 1539 aa11.95□□□□□ -0.5
GABPB1-211ENST00000561010 CDC42BPAQ5VT25 1732 aa11.94□□□□□ -0.5
GABPB1-211ENST00000561010 FMN1Q68DA7 1419 aa11.94□□□□□ -0.5
GABPB1-211ENST00000561010 PLCH2O75038 1416 aa11.92□□□□□ -0.5
GABPB1-211ENST00000561010 SCAPERQ9BY12 1400 aa11.91□□□□□ -0.5
GABPB1-211ENST00000561010 ARHGAP5Q13017 1502 aa11.91□□□□□ -0.5
GABPB1-211ENST00000561010 PREX2Q70Z35 1606 aa11.9□□□□□ -0.5
GABPB1-211ENST00000561010 POGZQ7Z3K3 1410 aa11.9□□□□□ -0.5
GABPB1-211ENST00000561010 ITSN2Q9NZM3 1697 aa11.9□□□□□ -0.5
GABPB1-211ENST00000561010 TROQ12816 1431 aaPredicted RBP11.89□□□□□ -0.51
GABPB1-211ENST00000561010 MLECQ14165 292 aa11.89□□□□□ -0.51
GABPB1-211ENST00000561010 LMTK3Q96Q04 1460 aa11.88□□□□□ -0.51
GABPB1-211ENST00000561010 ABCA6Q8N139 1617 aa11.87□□□□□ -0.51
GABPB1-211ENST00000561010 POTEIP0CG38 1075 aa11.86□□□□□ -0.51
GABPB1-211ENST00000561010 KDM5CP41229 1560 aa11.85□□□□□ -0.51
GABPB1-211ENST00000561010 DIP2CQ9Y2E4 1556 aa11.85□□□□□ -0.51
GABPB1-211ENST00000561010 PROM2Q8N271 834 aa11.85□□□□□ -0.51
GABPB1-211ENST00000561010 CLIP1P30622 1438 aa11.85□□□□□ -0.51
GABPB1-211ENST00000561010 KIDINS220Q9ULH0 1771 aa11.84□□□□□ -0.51
GABPB1-211ENST00000561010 MAGI2Q86UL8 1455 aa11.84□□□□□ -0.51
GABPB1-211ENST00000561010 EFCAB2Q5VUJ9 269 aa11.84□□□□□ -0.51
GABPB1-211ENST00000561010 CASKIN1Q8WXD9 1431 aa11.84□□□□□ -0.51
GABPB1-211ENST00000561010 ABCC1P33527 1531 aa11.83□□□□□ -0.52
GABPB1-211ENST00000561010 ARHGEF12Q9NZN5 1544 aa11.83□□□□□ -0.52
GABPB1-211ENST00000561010 HSPA2P54652 639 aa11.83□□□□□ -0.52
GABPB1-211ENST00000561010 CDK11AQ9UQ88 783 aaPredicted RBP11.83□□□□□ -0.52
GABPB1-211ENST00000561010 PREX1Q8TCU6 1659 aa11.83□□□□□ -0.52
GABPB1-211ENST00000561010 ATP10AO60312 1499 aa11.83□□□□□ -0.52
GABPB1-211ENST00000561010 CCDC18Q5T9S5 1454 aa11.83□□□□□ -0.52
GABPB1-211ENST00000561010 C3P01024 1663 aa11.82□□□□□ -0.52
GABPB1-211ENST00000561010 AFAP1Q8N556 730 aa11.82□□□□□ -0.52
GABPB1-211ENST00000561010 C9orf84Q5VXU9 1444 aa11.82□□□□□ -0.52
GABPB1-211ENST00000561010 SUPT6HQ7KZ85 1726 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms