RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 YEATS2Q9ULM3 1422 aa12.8□□□□□ -0.36
APH1B-209ENST00000560716 REREQ9P2R6 1566 aa12.79□□□□□ -0.36
APH1B-209ENST00000560716 PLEKHD1A6NEE1 506 aa12.79□□□□□ -0.36
APH1B-209ENST00000560716 HSPA2P54652 639 aa12.78□□□□□ -0.36
APH1B-209ENST00000560716 PLCH2O75038 1416 aa12.78□□□□□ -0.36
APH1B-209ENST00000560716 ATP10AO60312 1499 aa12.78□□□□□ -0.36
APH1B-209ENST00000560716 P3H3Q8IVL6 736 aa12.77□□□□□ -0.37
APH1B-209ENST00000560716 MYO5CQ9NQX4 1742 aa12.76□□□□□ -0.37
APH1B-209ENST00000560716 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
APH1B-209ENST00000560716 C9orf84Q5VXU9 1444 aa12.76□□□□□ -0.37
APH1B-209ENST00000560716 IQSEC2Q5JU85 1478 aa12.76□□□□□ -0.37
APH1B-209ENST00000560716 KDM5CP41229 1560 aa12.76□□□□□ -0.37
APH1B-209ENST00000560716 SOCS7O14512 581 aa12.75□□□□□ -0.37
APH1B-209ENST00000560716 EEA1Q15075 1411 aa12.75□□□□□ -0.37
APH1B-209ENST00000560716 CSRNP3Q8WYN3 585 aa12.75□□□□□ -0.37
APH1B-209ENST00000560716 DMRT2Q9Y5R5 561 aa12.75□□□□□ -0.37
APH1B-209ENST00000560716 PTPRTO14522 1441 aa12.74□□□□□ -0.37
APH1B-209ENST00000560716 SCAPERQ9BY12 1400 aa12.73□□□□□ -0.37
APH1B-209ENST00000560716 C3P01024 1663 aa12.71□□□□□ -0.37
APH1B-209ENST00000560716 LTBP4Q8N2S1 1624 aa12.71□□□□□ -0.37
APH1B-209ENST00000560716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.71□□□□□ -0.37
APH1B-209ENST00000560716 HNRNPUL2Q1KMD3 747 aaKnown RBP12.71□□□□□ -0.37
APH1B-209ENST00000560716 ZNF518AQ6AHZ1 1483 aa12.71□□□□□ -0.38
APH1B-209ENST00000560716 ILDR2Q71H61 639 aa12.7□□□□□ -0.38
APH1B-209ENST00000560716 AGLP35573 1532 aa12.7□□□□□ -0.38
APH1B-209ENST00000560716 UHRF1BP1Q6BDS2 1440 aa12.69□□□□□ -0.38
APH1B-209ENST00000560716 SPATA31D1Q6ZQQ2 1576 aa12.69□□□□□ -0.38
APH1B-209ENST00000560716 DIP2CQ9Y2E4 1556 aa12.69□□□□□ -0.38
APH1B-209ENST00000560716 CDK13Q14004 1512 aaKnown RBP12.67□□□□□ -0.38
APH1B-209ENST00000560716 MLH3Q9UHC1 1453 aa12.67□□□□□ -0.38
APH1B-209ENST00000560716 DISP3Q9P2K9 1392 aa12.67□□□□□ -0.38
APH1B-209ENST00000560716 MROH2AA6NES4 1674 aa12.67□□□□□ -0.38
APH1B-209ENST00000560716 CDC42BPBQ9Y5S2 1711 aa12.66□□□□□ -0.38
APH1B-209ENST00000560716 EFCAB2Q5VUJ9 269 aa12.66□□□□□ -0.38
APH1B-209ENST00000560716 KIF14Q15058 1648 aa12.65□□□□□ -0.38
APH1B-209ENST00000560716 ABCA6Q8N139 1617 aa12.65□□□□□ -0.38
APH1B-209ENST00000560716 LRRIQ1Q96JM4 1722 aa12.63□□□□□ -0.39
APH1B-209ENST00000560716 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
APH1B-209ENST00000560716 FMN1Q68DA7 1419 aa12.62□□□□□ -0.39
APH1B-209ENST00000560716 TRAPPC8Q9Y2L5 1435 aa12.62□□□□□ -0.39
APH1B-209ENST00000560716 MLECQ14165 292 aa12.62□□□□□ -0.39
APH1B-209ENST00000560716 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
APH1B-209ENST00000560716 CNTLNQ9NXG0 1405 aa12.62□□□□□ -0.39
APH1B-209ENST00000560716 KIDINS220Q9ULH0 1771 aa12.61□□□□□ -0.39
APH1B-209ENST00000560716 ITSN2Q9NZM3 1697 aa12.61□□□□□ -0.39
APH1B-209ENST00000560716 CEBPAP49715 358 aaPredicted RBP12.61□□□□□ -0.39
APH1B-209ENST00000560716 PREX2Q70Z35 1606 aa12.61□□□□□ -0.39
APH1B-209ENST00000560716 NPATQ14207 1427 aa12.61□□□□□ -0.39
APH1B-209ENST00000560716 ABCC1P33527 1531 aa12.6□□□□□ -0.39
APH1B-209ENST00000560716 ZNF142P52746 1687 aaPredicted RBP12.6□□□□□ -0.39
APH1B-209ENST00000560716 CDK11AQ9UQ88 783 aaPredicted RBP12.59□□□□□ -0.39
APH1B-209ENST00000560716 ARHGAP5Q13017 1502 aa12.58□□□□□ -0.4
APH1B-209ENST00000560716 ARHGAP35Q9NRY4 1499 aa12.57□□□□□ -0.4
APH1B-209ENST00000560716 CDC42BPAQ5VT25 1732 aa12.57□□□□□ -0.4
APH1B-209ENST00000560716 AFAP1Q8N556 730 aa12.56□□□□□ -0.4
APH1B-209ENST00000560716 PLA2R1Q13018 1463 aa12.56□□□□□ -0.4
APH1B-209ENST00000560716 CLIP1P30622 1438 aa12.55□□□□□ -0.4
APH1B-209ENST00000560716 CAMSAP1Q5T5Y3 1602 aa12.55□□□□□ -0.4
APH1B-209ENST00000560716 TCOF1Q13428 1488 aaKnown RBP12.53□□□□□ -0.4
APH1B-209ENST00000560716 PLXNC1O60486 1568 aa12.52□□□□□ -0.4
APH1B-209ENST00000560716 SUPT6HQ7KZ85 1726 aaKnown RBP12.52□□□□□ -0.41
APH1B-209ENST00000560716 SAMD9LQ8IVG5 1584 aa12.52□□□□□ -0.41
APH1B-209ENST00000560716 MYO3AQ8NEV4 1616 aa12.51□□□□□ -0.41
APH1B-209ENST00000560716 CCDC18Q5T9S5 1454 aa12.5□□□□□ -0.41
APH1B-209ENST00000560716 CLTCQ00610 1675 aaKnown RBP12.48□□□□□ -0.41
APH1B-209ENST00000560716 INO80Q9ULG1 1556 aaPredicted RBP12.48□□□□□ -0.41
APH1B-209ENST00000560716 CEP170BQ9Y4F5 1589 aaPredicted RBP12.48□□□□□ -0.41
APH1B-209ENST00000560716 ZMYM3Q14202 1370 aa12.48□□□□□ -0.41
APH1B-209ENST00000560716 PKD2Q13563 968 aa12.48□□□□□ -0.41
APH1B-209ENST00000560716 RANGAP1P46060 587 aaPredicted RBP12.47□□□□□ -0.41
APH1B-209ENST00000560716 PTPRKQ15262 1439 aa12.46□□□□□ -0.41
APH1B-209ENST00000560716 CASKIN1Q8WXD9 1431 aa12.46□□□□□ -0.41
APH1B-209ENST00000560716 ESF1Q9H501 851 aaKnown RBP12.46□□□□□ -0.41
APH1B-209ENST00000560716 KIAA1107Q9UPP5 1409 aa12.45□□□□□ -0.42
APH1B-209ENST00000560716 POLR1AO95602 1720 aaPredicted RBP12.45□□□□□ -0.42
APH1B-209ENST00000560716 ADGBQ8N7X0 1667 aa12.45□□□□□ -0.42
APH1B-209ENST00000560716 ATP7AQ04656 1500 aa12.44□□□□□ -0.42
APH1B-209ENST00000560716 DNMT1P26358 1616 aaKnown RBP12.44□□□□□ -0.42
APH1B-209ENST00000560716 CPS1P31327 1500 aa12.43□□□□□ -0.42
APH1B-209ENST00000560716 FAM135AQ9P2D6 1515 aa12.43□□□□□ -0.42
APH1B-209ENST00000560716 GPATCH8Q9UKJ3 1502 aaKnown RBP12.42□□□□□ -0.42
APH1B-209ENST00000560716 ZNF335Q9H4Z2 1342 aaPredicted RBP12.42□□□□□ -0.42
APH1B-209ENST00000560716 PLEKHH2Q8IVE3 1493 aa12.42□□□□□ -0.42
APH1B-209ENST00000560716 MED1Q15648 1581 aaPredicted RBP12.42□□□□□ -0.42
APH1B-209ENST00000560716 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
APH1B-209ENST00000560716 A2ML1A8K2U0 1454 aa12.41□□□□□ -0.42
APH1B-209ENST00000560716 A2MP01023 1474 aa12.41□□□□□ -0.42
APH1B-209ENST00000560716 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.42
APH1B-209ENST00000560716 NCKAP5LQ9HCH0 1330 aa12.4□□□□□ -0.42
APH1B-209ENST00000560716 NEURL4Q96JN8 1562 aa12.4□□□□□ -0.42
APH1B-209ENST00000560716 UBAP1LF5GYI3 381 aa12.4□□□□□ -0.42
APH1B-209ENST00000560716 MYT1LQ9UL68 1186 aa12.39□□□□□ -0.43
APH1B-209ENST00000560716 DEPDC5O75140 1603 aa12.38□□□□□ -0.43
APH1B-209ENST00000560716 SPAG9O60271 1321 aaKnown RBP12.37□□□□□ -0.43
APH1B-209ENST00000560716 ALKQ9UM73 1620 aa12.37□□□□□ -0.43
APH1B-209ENST00000560716 ATP1B4Q9UN42 357 aaPredicted RBP12.37□□□□□ -0.43
APH1B-209ENST00000560716 RTEL1-TNFRSF6BF6WH68 1400 aa12.37□□□□□ -0.43
APH1B-209ENST00000560716 MED14O60244 1454 aa12.36□□□□□ -0.43
APH1B-209ENST00000560716 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
APH1B-209ENST00000560716 VWDEQ8N2E2 1590 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms