RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 BCORL1Q5H9F3 1711 aa19.48■□□□□ 0.71
ALDH1A3-206ENST00000560555 VPS8Q8N3P4 1428 aa19.48■□□□□ 0.71
ALDH1A3-206ENST00000560555 PLPPR3Q6T4P5 718 aa19.47■□□□□ 0.71
ALDH1A3-206ENST00000560555 CDK11AQ9UQ88 783 aaPredicted RBP19.47■□□□□ 0.71
ALDH1A3-206ENST00000560555 PLCH2O75038 1416 aa19.44■□□□□ 0.7
ALDH1A3-206ENST00000560555 NEO1Q92859 1461 aa19.42■□□□□ 0.7
ALDH1A3-206ENST00000560555 CDC42BPBQ9Y5S2 1711 aa19.4■□□□□ 0.7
ALDH1A3-206ENST00000560555 KANK4Q5T7N3 995 aaPredicted RBP19.38■□□□□ 0.69
ALDH1A3-206ENST00000560555 RIMS1Q86UR5 1692 aaKnown RBP19.37■□□□□ 0.69
ALDH1A3-206ENST00000560555 FRMPD1Q5SYB0 1578 aa19.37■□□□□ 0.69
ALDH1A3-206ENST00000560555 FANCAO15360 1455 aa19.37■□□□□ 0.69
ALDH1A3-206ENST00000560555 AKNAQ7Z591 1439 aa19.37■□□□□ 0.69
ALDH1A3-206ENST00000560555 CDC42BPAQ5VT25 1732 aa19.37■□□□□ 0.69
ALDH1A3-206ENST00000560555 MYO5CQ9NQX4 1742 aa19.37■□□□□ 0.69
ALDH1A3-206ENST00000560555 TIAM1Q13009 1591 aa19.36■□□□□ 0.69
ALDH1A3-206ENST00000560555 GPATCH8Q9UKJ3 1502 aaKnown RBP19.35■□□□□ 0.69
ALDH1A3-206ENST00000560555 POGZQ7Z3K3 1410 aa19.34■□□□□ 0.69
ALDH1A3-206ENST00000560555 MAP3K1Q13233 1512 aa19.33■□□□□ 0.68
ALDH1A3-206ENST00000560555 RICTORQ6R327 1708 aa19.31■□□□□ 0.68
ALDH1A3-206ENST00000560555 PREX2Q70Z35 1606 aa19.31■□□□□ 0.68
ALDH1A3-206ENST00000560555 MTUS2Q5JR59 1369 aa19.31■□□□□ 0.68
ALDH1A3-206ENST00000560555 ARHGEF40Q8TER5 1519 aa19.3■□□□□ 0.68
ALDH1A3-206ENST00000560555 DENND4BO75064 1496 aaPredicted RBP19.3■□□□□ 0.68
ALDH1A3-206ENST00000560555 MLECQ14165 292 aa19.3■□□□□ 0.68
ALDH1A3-206ENST00000560555 EFCAB2Q5VUJ9 269 aa19.3■□□□□ 0.68
ALDH1A3-206ENST00000560555 ARHGEF12Q9NZN5 1544 aa19.3■□□□□ 0.68
ALDH1A3-206ENST00000560555 LRRC9Q6ZRR7 1453 aa19.29■□□□□ 0.68
ALDH1A3-206ENST00000560555 DMRT2Q9Y5R5 561 aa19.29■□□□□ 0.68
ALDH1A3-206ENST00000560555 EHBP1L1Q8N3D4 1523 aa19.29■□□□□ 0.68
ALDH1A3-206ENST00000560555 SPATA31D1Q6ZQQ2 1576 aa19.27■□□□□ 0.68
ALDH1A3-206ENST00000560555 SCAPERQ9BY12 1400 aa19.27■□□□□ 0.68
ALDH1A3-206ENST00000560555 YEATS2Q9ULM3 1422 aa19.27■□□□□ 0.68
ALDH1A3-206ENST00000560555 ARHGAP5Q13017 1502 aa19.26■□□□□ 0.67
ALDH1A3-206ENST00000560555 CFAP74Q9C0B2 1584 aa19.26■□□□□ 0.67
ALDH1A3-206ENST00000560555 NCOA2Q15596 1464 aa19.24■□□□□ 0.67
ALDH1A3-206ENST00000560555 SAMD9LQ8IVG5 1584 aa19.23■□□□□ 0.67
ALDH1A3-206ENST00000560555 ZNF644Q9H582 1327 aaPredicted RBP19.23■□□□□ 0.67
ALDH1A3-206ENST00000560555 AFAP1Q8N556 730 aa19.22■□□□□ 0.67
ALDH1A3-206ENST00000560555 TRAPPC8Q9Y2L5 1435 aa19.22■□□□□ 0.67
ALDH1A3-206ENST00000560555 CCNB3Q8WWL7 1395 aa19.21■□□□□ 0.67
ALDH1A3-206ENST00000560555 CEBPAP49715 358 aaPredicted RBP19.21■□□□□ 0.67
ALDH1A3-206ENST00000560555 SUPT6HQ7KZ85 1726 aaKnown RBP19.21■□□□□ 0.67
ALDH1A3-206ENST00000560555 ABCC1P33527 1531 aa19.2■□□□□ 0.66
ALDH1A3-206ENST00000560555 ZMYM4Q5VZL5 1548 aa19.2■□□□□ 0.66
ALDH1A3-206ENST00000560555 SIGLEC1Q9BZZ2 1709 aa19.18■□□□□ 0.66
ALDH1A3-206ENST00000560555 CFDP1Q9UEE9 299 aaPredicted RBP19.18■□□□□ 0.66
ALDH1A3-206ENST00000560555 ZFYVE16Q7Z3T8 1539 aa19.18■□□□□ 0.66
ALDH1A3-206ENST00000560555 ITSN2Q9NZM3 1697 aa19.17■□□□□ 0.66
ALDH1A3-206ENST00000560555 HNRNPMP52272 730 aaKnown RBP eCLIP19.17■□□□□ 0.66
ALDH1A3-206ENST00000560555 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
ALDH1A3-206ENST00000560555 MAGI2Q86UL8 1455 aa19.16■□□□□ 0.66
ALDH1A3-206ENST00000560555 KDM5CP41229 1560 aa19.16■□□□□ 0.66
ALDH1A3-206ENST00000560555 MBD5Q9P267 1494 aa19.15■□□□□ 0.66
ALDH1A3-206ENST00000560555 KIAA1107Q9UPP5 1409 aa19.14■□□□□ 0.65
ALDH1A3-206ENST00000560555 SYCP2Q9BX26 1530 aa19.12■□□□□ 0.65
ALDH1A3-206ENST00000560555 PTPRTO14522 1441 aa19.12■□□□□ 0.65
ALDH1A3-206ENST00000560555 STRCQ7RTU9 1775 aa19.11■□□□□ 0.65
ALDH1A3-206ENST00000560555 ZNF518AQ6AHZ1 1483 aa19.11■□□□□ 0.65
ALDH1A3-206ENST00000560555 UHRF1BP1Q6BDS2 1440 aa19.11■□□□□ 0.65
ALDH1A3-206ENST00000560555 KIDINS220Q9ULH0 1771 aa19.11■□□□□ 0.65
ALDH1A3-206ENST00000560555 MLH3Q9UHC1 1453 aa19.1■□□□□ 0.65
ALDH1A3-206ENST00000560555 FER1L4A9Z1Z3 1794 aa19.1■□□□□ 0.65
ALDH1A3-206ENST00000560555 PREX1Q8TCU6 1659 aa19.09■□□□□ 0.65
ALDH1A3-206ENST00000560555 ATP10AO60312 1499 aa19.09■□□□□ 0.65
ALDH1A3-206ENST00000560555 APLP2Q06481 763 aa19.08■□□□□ 0.64
ALDH1A3-206ENST00000560555 MYOM3Q5VTT5 1437 aa19.08■□□□□ 0.64
ALDH1A3-206ENST00000560555 PLEKHH2Q8IVE3 1493 aa19.06■□□□□ 0.64
ALDH1A3-206ENST00000560555 LTBP4Q8N2S1 1624 aa19.06■□□□□ 0.64
ALDH1A3-206ENST00000560555 C9orf84Q5VXU9 1444 aa19.06■□□□□ 0.64
ALDH1A3-206ENST00000560555 CAMSAP2Q08AD1 1489 aa19.05■□□□□ 0.64
ALDH1A3-206ENST00000560555 ABCA6Q8N139 1617 aa19.05■□□□□ 0.64
ALDH1A3-206ENST00000560555 DIP2CQ9Y2E4 1556 aa19.05■□□□□ 0.64
ALDH1A3-206ENST00000560555 IQSEC2Q5JU85 1478 aa19.04■□□□□ 0.64
ALDH1A3-206ENST00000560555 MIA2Q96PC5 1412 aa19.04■□□□□ 0.64
ALDH1A3-206ENST00000560555 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
ALDH1A3-206ENST00000560555 INO80Q9ULG1 1556 aaPredicted RBP19.01■□□□□ 0.63
ALDH1A3-206ENST00000560555 SPAG9O60271 1321 aaKnown RBP18.99■□□□□ 0.63
ALDH1A3-206ENST00000560555 ARHGEF5Q12774 1597 aa18.98■□□□□ 0.63
ALDH1A3-206ENST00000560555 UBAP1LF5GYI3 381 aa18.98■□□□□ 0.63
ALDH1A3-206ENST00000560555 FGD6Q6ZV73 1430 aa18.98■□□□□ 0.63
ALDH1A3-206ENST00000560555 REREQ9P2R6 1566 aa18.98■□□□□ 0.63
ALDH1A3-206ENST00000560555 TCOF1Q13428 1488 aaKnown RBP18.97■□□□□ 0.63
ALDH1A3-206ENST00000560555 ATP7AQ04656 1500 aa18.97■□□□□ 0.63
ALDH1A3-206ENST00000560555 PTPN23Q9H3S7 1636 aa18.96■□□□□ 0.63
ALDH1A3-206ENST00000560555 RSPH4AQ5TD94 716 aa18.96■□□□□ 0.63
ALDH1A3-206ENST00000560555 RTEL1-TNFRSF6BF6WH68 1400 aa18.95■□□□□ 0.62
ALDH1A3-206ENST00000560555 CCDC141Q6ZP82 1450 aa18.95■□□□□ 0.62
ALDH1A3-206ENST00000560555 NCOA1Q15788 1441 aa18.94■□□□□ 0.62
ALDH1A3-206ENST00000560555 ABCC5O15440 1437 aa18.93■□□□□ 0.62
ALDH1A3-206ENST00000560555 AGLP35573 1532 aa18.93■□□□□ 0.62
ALDH1A3-206ENST00000560555 ESF1Q9H501 851 aaKnown RBP18.92■□□□□ 0.62
ALDH1A3-206ENST00000560555 SETD1BQ9UPS6 1966 aaKnown RBP18.92■□□□□ 0.62
ALDH1A3-206ENST00000560555 PLXNC1O60486 1568 aa18.91■□□□□ 0.62
ALDH1A3-206ENST00000560555 MYT1LQ9UL68 1186 aa18.91■□□□□ 0.62
ALDH1A3-206ENST00000560555 ZNF335Q9H4Z2 1342 aaPredicted RBP18.91■□□□□ 0.62
ALDH1A3-206ENST00000560555 ADGBQ8N7X0 1667 aa18.91■□□□□ 0.62
ALDH1A3-206ENST00000560555 MAST1Q9Y2H9 1570 aa18.9■□□□□ 0.62
ALDH1A3-206ENST00000560555 A2MP01023 1474 aa18.89■□□□□ 0.61
ALDH1A3-206ENST00000560555 DNMT1P26358 1616 aaKnown RBP18.87■□□□□ 0.61
ALDH1A3-206ENST00000560555 NCKAP5LQ9HCH0 1330 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms