RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 LMTK3Q96Q04 1460 aa17.53■□□□□ 0.4
CDC42BPB-207ENST00000560492 ATP1B4Q9UN42 357 aaPredicted RBP17.53■□□□□ 0.4
CDC42BPB-207ENST00000560492 EFCAB5A4FU69 1503 aa17.52■□□□□ 0.4
CDC42BPB-207ENST00000560492 ZFYVE16Q7Z3T8 1539 aa17.52■□□□□ 0.4
CDC42BPB-207ENST00000560492 MLECQ14165 292 aa17.52■□□□□ 0.4
CDC42BPB-207ENST00000560492 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.4
CDC42BPB-207ENST00000560492 FER1L4A9Z1Z3 1794 aa17.52■□□□□ 0.4
CDC42BPB-207ENST00000560492 CDK13Q14004 1512 aaKnown RBP17.51■□□□□ 0.39
CDC42BPB-207ENST00000560492 HSPA2P54652 639 aa17.49■□□□□ 0.39
CDC42BPB-207ENST00000560492 ZMYM4Q5VZL5 1548 aa17.48■□□□□ 0.39
CDC42BPB-207ENST00000560492 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
CDC42BPB-207ENST00000560492 HECW1Q76N89 1606 aa17.47■□□□□ 0.39
CDC42BPB-207ENST00000560492 SIGLEC1Q9BZZ2 1709 aa17.47■□□□□ 0.39
CDC42BPB-207ENST00000560492 MYO5CQ9NQX4 1742 aa17.47■□□□□ 0.39
CDC42BPB-207ENST00000560492 SCAPERQ9BY12 1400 aa17.44■□□□□ 0.38
CDC42BPB-207ENST00000560492 MYT1LQ9UL68 1186 aa17.43■□□□□ 0.38
CDC42BPB-207ENST00000560492 MAGI2Q86UL8 1455 aa17.43■□□□□ 0.38
CDC42BPB-207ENST00000560492 UBTFP17480 764 aaKnown RBP17.42■□□□□ 0.38
CDC42BPB-207ENST00000560492 PLCH2O75038 1416 aa17.39■□□□□ 0.38
CDC42BPB-207ENST00000560492 PPP4R3CPQ6ZMV5 832 aa17.39■□□□□ 0.37
CDC42BPB-207ENST00000560492 KIF14Q15058 1648 aa17.39■□□□□ 0.37
CDC42BPB-207ENST00000560492 EFCAB2Q5VUJ9 269 aa17.38■□□□□ 0.37
CDC42BPB-207ENST00000560492 PREX1Q8TCU6 1659 aa17.38■□□□□ 0.37
CDC42BPB-207ENST00000560492 FMN1Q68DA7 1419 aa17.38■□□□□ 0.37
CDC42BPB-207ENST00000560492 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
CDC42BPB-207ENST00000560492 C9orf84Q5VXU9 1444 aa17.37■□□□□ 0.37
CDC42BPB-207ENST00000560492 ATP10AO60312 1499 aa17.37■□□□□ 0.37
CDC42BPB-207ENST00000560492 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
CDC42BPB-207ENST00000560492 ARHGEF12Q9NZN5 1544 aa17.33■□□□□ 0.37
CDC42BPB-207ENST00000560492 CLIP1P30622 1438 aa17.33■□□□□ 0.36
CDC42BPB-207ENST00000560492 CERKQ8TCT0 537 aa17.33■□□□□ 0.36
CDC42BPB-207ENST00000560492 ZNF518AQ6AHZ1 1483 aa17.32■□□□□ 0.36
CDC42BPB-207ENST00000560492 CEBPAP49715 358 aaPredicted RBP17.32■□□□□ 0.36
CDC42BPB-207ENST00000560492 ARHGAP35Q9NRY4 1499 aa17.31■□□□□ 0.36
CDC42BPB-207ENST00000560492 LRRIQ1Q96JM4 1722 aa17.3■□□□□ 0.36
CDC42BPB-207ENST00000560492 TROQ12816 1431 aaPredicted RBP17.29■□□□□ 0.36
CDC42BPB-207ENST00000560492 ESF1Q9H501 851 aaKnown RBP17.28■□□□□ 0.36
CDC42BPB-207ENST00000560492 UHRF1BP1Q6BDS2 1440 aa17.28■□□□□ 0.36
CDC42BPB-207ENST00000560492 CDC42BPBQ9Y5S2 1711 aa17.27■□□□□ 0.36
CDC42BPB-207ENST00000560492 AFAP1Q8N556 730 aa17.27■□□□□ 0.36
CDC42BPB-207ENST00000560492 KDM5CP41229 1560 aa17.26■□□□□ 0.35
CDC42BPB-207ENST00000560492 DIP2CQ9Y2E4 1556 aa17.26■□□□□ 0.35
CDC42BPB-207ENST00000560492 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
CDC42BPB-207ENST00000560492 SETD1BQ9UPS6 1966 aaKnown RBP17.24■□□□□ 0.35
CDC42BPB-207ENST00000560492 C3P01024 1663 aa17.24■□□□□ 0.35
CDC42BPB-207ENST00000560492 STRCQ7RTU9 1775 aa17.24■□□□□ 0.35
CDC42BPB-207ENST00000560492 PREX2Q70Z35 1606 aa17.24■□□□□ 0.35
CDC42BPB-207ENST00000560492 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
CDC42BPB-207ENST00000560492 ABCC1P33527 1531 aa17.19■□□□□ 0.34
CDC42BPB-207ENST00000560492 REREQ9P2R6 1566 aa17.19■□□□□ 0.34
CDC42BPB-207ENST00000560492 CDC42BPAQ5VT25 1732 aa17.18■□□□□ 0.34
CDC42BPB-207ENST00000560492 CCDC18Q5T9S5 1454 aa17.18■□□□□ 0.34
CDC42BPB-207ENST00000560492 ZNF777Q9ULD5 760 aaPredicted RBP17.17■□□□□ 0.34
CDC42BPB-207ENST00000560492 MLH3Q9UHC1 1453 aa17.17■□□□□ 0.34
CDC42BPB-207ENST00000560492 DISP3Q9P2K9 1392 aa17.16■□□□□ 0.34
CDC42BPB-207ENST00000560492 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
CDC42BPB-207ENST00000560492 KIDINS220Q9ULH0 1771 aa17.15■□□□□ 0.34
CDC42BPB-207ENST00000560492 SUPT6HQ7KZ85 1726 aaKnown RBP17.14■□□□□ 0.33
CDC42BPB-207ENST00000560492 AGLP35573 1532 aa17.13■□□□□ 0.33
CDC42BPB-207ENST00000560492 CASKIN1Q8WXD9 1431 aa17.13■□□□□ 0.33
CDC42BPB-207ENST00000560492 PTPRTO14522 1441 aa17.1■□□□□ 0.33
CDC42BPB-207ENST00000560492 CNTLNQ9NXG0 1405 aa17.1■□□□□ 0.33
CDC42BPB-207ENST00000560492 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
CDC42BPB-207ENST00000560492 SAMD9LQ8IVG5 1584 aa17.09■□□□□ 0.33
CDC42BPB-207ENST00000560492 MROH2AA6NES4 1674 aa17.09■□□□□ 0.33
CDC42BPB-207ENST00000560492 FYCO1Q9BQS8 1478 aa17.08■□□□□ 0.32
CDC42BPB-207ENST00000560492 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-207ENST00000560492 SPATA31D1Q6ZQQ2 1576 aa17.07■□□□□ 0.32
CDC42BPB-207ENST00000560492 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-207ENST00000560492 CAMSAP1Q5T5Y3 1602 aa17.07■□□□□ 0.32
CDC42BPB-207ENST00000560492 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
CDC42BPB-207ENST00000560492 HNRNPMP52272 730 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDC42BPB-207ENST00000560492 NCOA1Q15788 1441 aa17.04■□□□□ 0.32
CDC42BPB-207ENST00000560492 ATP7AQ04656 1500 aa17.04■□□□□ 0.32
CDC42BPB-207ENST00000560492 ILDR2Q71H61 639 aa17.03■□□□□ 0.32
CDC42BPB-207ENST00000560492 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
CDC42BPB-207ENST00000560492 LTBP4Q8N2S1 1624 aa17.02■□□□□ 0.31
CDC42BPB-207ENST00000560492 NPATQ14207 1427 aa17.02■□□□□ 0.31
CDC42BPB-207ENST00000560492 MYO3AQ8NEV4 1616 aa17.01■□□□□ 0.31
CDC42BPB-207ENST00000560492 CFDP1Q9UEE9 299 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPB-207ENST00000560492 ZMYM3Q14202 1370 aa17.01■□□□□ 0.31
CDC42BPB-207ENST00000560492 CCNB3Q8WWL7 1395 aa17.01■□□□□ 0.31
CDC42BPB-207ENST00000560492 GPATCH8Q9UKJ3 1502 aaKnown RBP17.01■□□□□ 0.31
CDC42BPB-207ENST00000560492 GGT6Q6P531 493 aa17■□□□□ 0.31
CDC42BPB-207ENST00000560492 PLEKHH2Q8IVE3 1493 aa16.99■□□□□ 0.31
CDC42BPB-207ENST00000560492 NCKAP5LQ9HCH0 1330 aa16.99■□□□□ 0.31
CDC42BPB-207ENST00000560492 INO80Q9ULG1 1556 aaPredicted RBP16.99■□□□□ 0.31
CDC42BPB-207ENST00000560492 MTUS2Q5JR59 1369 aa16.99■□□□□ 0.31
CDC42BPB-207ENST00000560492 A2MP01023 1474 aa16.99■□□□□ 0.31
CDC42BPB-207ENST00000560492 ZNF142P52746 1687 aaPredicted RBP16.98■□□□□ 0.31
CDC42BPB-207ENST00000560492 ADGBQ8N7X0 1667 aa16.98■□□□□ 0.31
CDC42BPB-207ENST00000560492 IQSEC2Q5JU85 1478 aa16.98■□□□□ 0.31
CDC42BPB-207ENST00000560492 SOCS7O14512 581 aa16.97■□□□□ 0.31
CDC42BPB-207ENST00000560492 CEP170BQ9Y4F5 1589 aaPredicted RBP16.97■□□□□ 0.31
CDC42BPB-207ENST00000560492 PLXNC1O60486 1568 aa16.95■□□□□ 0.3
CDC42BPB-207ENST00000560492 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
CDC42BPB-207ENST00000560492 UBAP1LF5GYI3 381 aa16.95■□□□□ 0.3
CDC42BPB-207ENST00000560492 ZNF335Q9H4Z2 1342 aaPredicted RBP16.95■□□□□ 0.3
CDC42BPB-207ENST00000560492 CACNB1Q02641 598 aaPredicted RBP16.94■□□□□ 0.3
CDC42BPB-207ENST00000560492 KIAA1107Q9UPP5 1409 aa16.94■□□□□ 0.3
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