RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 BIVM-ERCC5R4GMW8 1640 aa12□□□□□ -0.49
HERC1-208ENST00000560462 NCOA1Q15788 1441 aa12□□□□□ -0.49
HERC1-208ENST00000560462 IQGAP2Q13576 1575 aa11.98□□□□□ -0.49
HERC1-208ENST00000560462 SIGLEC1Q9BZZ2 1709 aa11.97□□□□□ -0.49
HERC1-208ENST00000560462 ARHGEF12Q9NZN5 1544 aa11.96□□□□□ -0.5
HERC1-208ENST00000560462 POTEAQ6S8J7 498 aa11.95□□□□□ -0.5
HERC1-208ENST00000560462 KIAA0556O60303 1618 aa11.93□□□□□ -0.5
HERC1-208ENST00000560462 DENND4BO75064 1496 aaPredicted RBP11.93□□□□□ -0.5
HERC1-208ENST00000560462 ZFYVE16Q7Z3T8 1539 aa11.92□□□□□ -0.5
HERC1-208ENST00000560462 ABCA9Q8IUA7 1624 aa11.92□□□□□ -0.5
HERC1-208ENST00000560462 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
HERC1-208ENST00000560462 IGF1RP08069 1367 aa11.92□□□□□ -0.5
HERC1-208ENST00000560462 FHOD3Q2V2M9 1422 aa11.91□□□□□ -0.5
HERC1-208ENST00000560462 EFCAB5A4FU69 1503 aa11.91□□□□□ -0.5
HERC1-208ENST00000560462 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
HERC1-208ENST00000560462 POTEDQ86YR6 584 aa11.89□□□□□ -0.51
HERC1-208ENST00000560462 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
HERC1-208ENST00000560462 RICTORQ6R327 1708 aa11.89□□□□□ -0.51
HERC1-208ENST00000560462 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
HERC1-208ENST00000560462 ZMYM4Q5VZL5 1548 aa11.87□□□□□ -0.51
HERC1-208ENST00000560462 CAMSAP1Q5T5Y3 1602 aa11.87□□□□□ -0.51
HERC1-208ENST00000560462 MAGI2Q86UL8 1455 aa11.87□□□□□ -0.51
HERC1-208ENST00000560462 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
HERC1-208ENST00000560462 UGGT2Q9NYU1 1516 aa11.86□□□□□ -0.51
HERC1-208ENST00000560462 PTPRKQ15262 1439 aa11.85□□□□□ -0.51
HERC1-208ENST00000560462 TRAPPC8Q9Y2L5 1435 aa11.85□□□□□ -0.51
HERC1-208ENST00000560462 ABCA8O94911 1581 aa11.84□□□□□ -0.51
HERC1-208ENST00000560462 CARMIL1Q5VZK9 1371 aa11.82□□□□□ -0.52
HERC1-208ENST00000560462 PKD2Q13563 968 aa11.82□□□□□ -0.52
HERC1-208ENST00000560462 IFFO2Q5TF58 517 aa11.81□□□□□ -0.52
HERC1-208ENST00000560462 CPS1P31327 1500 aa11.81□□□□□ -0.52
HERC1-208ENST00000560462 C9orf84Q5VXU9 1444 aa11.8□□□□□ -0.52
HERC1-208ENST00000560462 ARID3CA6NKF2 412 aa11.8□□□□□ -0.52
HERC1-208ENST00000560462 ATP10AO60312 1499 aa11.8□□□□□ -0.52
HERC1-208ENST00000560462 ALKQ9UM73 1620 aa11.78□□□□□ -0.52
HERC1-208ENST00000560462 KIF27Q86VH2 1401 aa11.78□□□□□ -0.52
HERC1-208ENST00000560462 C3P01024 1663 aa11.78□□□□□ -0.52
HERC1-208ENST00000560462 HECW1Q76N89 1606 aa11.77□□□□□ -0.53
HERC1-208ENST00000560462 PLA2R1Q13018 1463 aa11.76□□□□□ -0.53
HERC1-208ENST00000560462 ESF1Q9H501 851 aaKnown RBP11.76□□□□□ -0.53
HERC1-208ENST00000560462 ATP10BO94823 1461 aa11.75□□□□□ -0.53
HERC1-208ENST00000560462 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
HERC1-208ENST00000560462 CFAP74Q9C0B2 1584 aa11.74□□□□□ -0.53
HERC1-208ENST00000560462 SHANK2Q9UPX8 1470 aa11.73□□□□□ -0.53
HERC1-208ENST00000560462 RAPGEF2Q9Y4G8 1499 aa11.73□□□□□ -0.53
HERC1-208ENST00000560462 NPATQ14207 1427 aa11.69□□□□□ -0.54
HERC1-208ENST00000560462 GOLGA3Q08378 1498 aa11.69□□□□□ -0.54
HERC1-208ENST00000560462 SLC24A1O60721 1099 aa11.68□□□□□ -0.54
HERC1-208ENST00000560462 TRIM52Q96A61 297 aa11.68□□□□□ -0.54
HERC1-208ENST00000560462 RNF216Q9NWF9 866 aaPredicted RBP11.68□□□□□ -0.54
HERC1-208ENST00000560462 AMER1Q5JTC6 1135 aaPredicted RBP11.66□□□□□ -0.54
HERC1-208ENST00000560462 FAM9AQ8IZU1 332 aaPredicted RBP11.66□□□□□ -0.54
HERC1-208ENST00000560462 SCAPERQ9BY12 1400 aa11.66□□□□□ -0.54
HERC1-208ENST00000560462 CNTLNQ9NXG0 1405 aa11.66□□□□□ -0.54
HERC1-208ENST00000560462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
HERC1-208ENST00000560462 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
HERC1-208ENST00000560462 RBM33Q96EV2 1170 aaKnown RBP11.64□□□□□ -0.55
HERC1-208ENST00000560462 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
HERC1-208ENST00000560462 ZNF142P52746 1687 aaPredicted RBP11.63□□□□□ -0.55
HERC1-208ENST00000560462 SUPT6HQ7KZ85 1726 aaKnown RBP11.63□□□□□ -0.55
HERC1-208ENST00000560462 CEP170BQ9Y4F5 1589 aaPredicted RBP11.62□□□□□ -0.55
HERC1-208ENST00000560462 AGLP35573 1532 aa11.62□□□□□ -0.55
HERC1-208ENST00000560462 LRRC7Q96NW7 1537 aa11.62□□□□□ -0.55
HERC1-208ENST00000560462 RNF17Q9BXT8 1623 aaKnown RBP11.62□□□□□ -0.55
HERC1-208ENST00000560462 MYO3AQ8NEV4 1616 aa11.6□□□□□ -0.55
HERC1-208ENST00000560462 VWDEQ8N2E2 1590 aa11.59□□□□□ -0.55
HERC1-208ENST00000560462 SETBP1Q9Y6X0 1596 aa11.59□□□□□ -0.55
HERC1-208ENST00000560462 REREQ9P2R6 1566 aa11.58□□□□□ -0.56
HERC1-208ENST00000560462 ZMYM3Q14202 1370 aa11.57□□□□□ -0.56
HERC1-208ENST00000560462 MAPK8IP2Q13387 824 aaPredicted RBP11.57□□□□□ -0.56
HERC1-208ENST00000560462 ZNF772Q68DY9 489 aaPredicted RBP11.57□□□□□ -0.56
HERC1-208ENST00000560462 RTN4Q9NQC3 1192 aaKnown RBP11.57□□□□□ -0.56
HERC1-208ENST00000560462 MYT1LQ9UL68 1186 aa11.57□□□□□ -0.56
HERC1-208ENST00000560462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.56□□□□□ -0.56
HERC1-208ENST00000560462 NEURL4Q96JN8 1562 aa11.56□□□□□ -0.56
HERC1-208ENST00000560462 DIP2CQ9Y2E4 1556 aa11.55□□□□□ -0.56
HERC1-208ENST00000560462 RXRBP28702 533 aa11.55□□□□□ -0.56
HERC1-208ENST00000560462 ZNF518AQ6AHZ1 1483 aa11.55□□□□□ -0.56
HERC1-208ENST00000560462 MROH2AA6NES4 1674 aa11.55□□□□□ -0.56
HERC1-208ENST00000560462 PLEKHD1A6NEE1 506 aa11.54□□□□□ -0.56
HERC1-208ENST00000560462 FAM135BQ49AJ0 1406 aa11.53□□□□□ -0.56
HERC1-208ENST00000560462 CDK12Q9NYV4 1490 aaPredicted RBP11.53□□□□□ -0.56
HERC1-208ENST00000560462 POLR1AO95602 1720 aaPredicted RBP11.53□□□□□ -0.56
HERC1-208ENST00000560462 SYNMO15061 1565 aa11.52□□□□□ -0.57
HERC1-208ENST00000560462 AFAP1Q8N556 730 aa11.51□□□□□ -0.57
HERC1-208ENST00000560462 A2ML1A8K2U0 1454 aa11.51□□□□□ -0.57
HERC1-208ENST00000560462 KDM5CP41229 1560 aa11.5□□□□□ -0.57
HERC1-208ENST00000560462 PLCH2O75038 1416 aa11.5□□□□□ -0.57
HERC1-208ENST00000560462 DNMT1P26358 1616 aaKnown RBP11.49□□□□□ -0.57
HERC1-208ENST00000560462 MEX3CQ5U5Q3 659 aaKnown RBP11.49□□□□□ -0.57
HERC1-208ENST00000560462 ABCA6Q8N139 1617 aa11.49□□□□□ -0.57
HERC1-208ENST00000560462 RAPGEF6Q8TEU7 1601 aa11.49□□□□□ -0.57
HERC1-208ENST00000560462 CTTNBP2Q8WZ74 1663 aa11.49□□□□□ -0.57
HERC1-208ENST00000560462 ANKLE2Q86XL3 938 aa11.48□□□□□ -0.57
HERC1-208ENST00000560462 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
HERC1-208ENST00000560462 NPHP4O75161 1426 aaPredicted RBP11.47□□□□□ -0.57
HERC1-208ENST00000560462 JCADQ9P266 1359 aa11.47□□□□□ -0.57
HERC1-208ENST00000560462 EFCAB2Q5VUJ9 269 aa11.47□□□□□ -0.57
HERC1-208ENST00000560462 CDK13Q14004 1512 aaKnown RBP11.46□□□□□ -0.57
HERC1-208ENST00000560462 NUP153P49790 1475 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms