RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 ITSN2Q9NZM3 1697 aa15.98■□□□□ 0.15
SNRPA1-211ENST00000560433 HNRNPMP52272 730 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNRPA1-211ENST00000560433 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
SNRPA1-211ENST00000560433 NEUROD1Q13562 356 aa15.97■□□□□ 0.15
SNRPA1-211ENST00000560433 MAPKBP1O60336 1514 aa15.97■□□□□ 0.15
SNRPA1-211ENST00000560433 KDM6BO15054 1643 aa15.97■□□□□ 0.15
SNRPA1-211ENST00000560433 TRIM52Q96A61 297 aa15.96■□□□□ 0.15
SNRPA1-211ENST00000560433 TTC37Q6PGP7 1564 aa15.96■□□□□ 0.15
SNRPA1-211ENST00000560433 KDM5BQ9UGL1 1544 aa15.96■□□□□ 0.14
SNRPA1-211ENST00000560433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNRPA1-211ENST00000560433 DNMT1P26358 1616 aaKnown RBP15.95■□□□□ 0.14
SNRPA1-211ENST00000560433 UHRF1BP1LA0JNW5 1464 aa15.95■□□□□ 0.14
SNRPA1-211ENST00000560433 CDC42BPBQ9Y5S2 1711 aa15.93■□□□□ 0.14
SNRPA1-211ENST00000560433 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
SNRPA1-211ENST00000560433 ARHGAP5Q13017 1502 aa15.9■□□□□ 0.14
SNRPA1-211ENST00000560433 FOXD1Q16676 465 aa15.89■□□□□ 0.13
SNRPA1-211ENST00000560433 AKNAQ7Z591 1439 aa15.89■□□□□ 0.13
SNRPA1-211ENST00000560433 CYB5RLQ6IPT4 315 aa15.88■□□□□ 0.13
SNRPA1-211ENST00000560433 GCC2Q8IWJ2 1684 aa15.88■□□□□ 0.13
SNRPA1-211ENST00000560433 SAMD9LQ8IVG5 1584 aa15.88■□□□□ 0.13
SNRPA1-211ENST00000560433 PREX2Q70Z35 1606 aa15.88■□□□□ 0.13
SNRPA1-211ENST00000560433 TSPY4P0CV99 314 aa15.87■□□□□ 0.13
SNRPA1-211ENST00000560433 TSPY10P0CW01 314 aa15.87■□□□□ 0.13
SNRPA1-211ENST00000560433 NCOA1Q15788 1441 aa15.86■□□□□ 0.13
SNRPA1-211ENST00000560433 NPM1P06748 294 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNRPA1-211ENST00000560433 ROCK1Q13464 1354 aa15.85■□□□□ 0.13
SNRPA1-211ENST00000560433 ASXL2Q76L83 1435 aa15.84■□□□□ 0.13
SNRPA1-211ENST00000560433 MYO5CQ9NQX4 1742 aa15.84■□□□□ 0.13
SNRPA1-211ENST00000560433 MBD5Q9P267 1494 aa15.84■□□□□ 0.13
SNRPA1-211ENST00000560433 WDR7Q9Y4E6 1490 aa15.84■□□□□ 0.13
SNRPA1-211ENST00000560433 SYCP2Q9BX26 1530 aa15.84■□□□□ 0.13
SNRPA1-211ENST00000560433 C9orf84Q5VXU9 1444 aa15.84■□□□□ 0.13
SNRPA1-211ENST00000560433 CROCC2H7BZ55 1655 aa15.83■□□□□ 0.13
SNRPA1-211ENST00000560433 MPHOSPH9Q99550 1183 aa15.83■□□□□ 0.12
SNRPA1-211ENST00000560433 ANKRD30AQ9BXX3 1397 aa15.82■□□□□ 0.12
SNRPA1-211ENST00000560433 PLCH2O75038 1416 aa15.82■□□□□ 0.12
SNRPA1-211ENST00000560433 DENND4BO75064 1496 aaPredicted RBP15.81■□□□□ 0.12
SNRPA1-211ENST00000560433 ARHGEF12Q9NZN5 1544 aa15.8■□□□□ 0.12
SNRPA1-211ENST00000560433 EFCAB2Q5VUJ9 269 aa15.8■□□□□ 0.12
SNRPA1-211ENST00000560433 ADGBQ8N7X0 1667 aa15.79■□□□□ 0.12
SNRPA1-211ENST00000560433 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
SNRPA1-211ENST00000560433 SLC4A1APQ9BWU0 796 aaKnown RBP15.79■□□□□ 0.12
SNRPA1-211ENST00000560433 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
SNRPA1-211ENST00000560433 ADGRL2O95490 1459 aa15.78■□□□□ 0.12
SNRPA1-211ENST00000560433 ANKRD50Q9ULJ7 1429 aa15.77■□□□□ 0.12
SNRPA1-211ENST00000560433 AFAP1Q8N556 730 aa15.77■□□□□ 0.12
SNRPA1-211ENST00000560433 KIF15Q9NS87 1388 aa15.77■□□□□ 0.11
SNRPA1-211ENST00000560433 ARHGEF5Q12774 1597 aa15.76■□□□□ 0.11
SNRPA1-211ENST00000560433 RIMBP3CA6NJZ7 1639 aa15.75■□□□□ 0.11
SNRPA1-211ENST00000560433 RIMBP3BA6NNM3 1639 aa15.75■□□□□ 0.11
SNRPA1-211ENST00000560433 RIMBP3Q9UFD9 1639 aa15.75■□□□□ 0.11
SNRPA1-211ENST00000560433 TRAPPC8Q9Y2L5 1435 aa15.75■□□□□ 0.11
SNRPA1-211ENST00000560433 SHANK2Q9UPX8 1470 aa15.74■□□□□ 0.11
SNRPA1-211ENST00000560433 RSPH4AQ5TD94 716 aa15.73■□□□□ 0.11
SNRPA1-211ENST00000560433 MYT1LQ9UL68 1186 aa15.72■□□□□ 0.11
SNRPA1-211ENST00000560433 FANCAO15360 1455 aa15.72■□□□□ 0.11
SNRPA1-211ENST00000560433 TONSLQ96HA7 1378 aa15.71■□□□□ 0.11
SNRPA1-211ENST00000560433 DIEXFQ68CQ4 756 aaKnown RBP15.71■□□□□ 0.11
SNRPA1-211ENST00000560433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.71■□□□□ 0.11
SNRPA1-211ENST00000560433 NUP155O75694 1391 aa15.71■□□□□ 0.11
SNRPA1-211ENST00000560433 KIAA1107Q9UPP5 1409 aa15.71■□□□□ 0.11
SNRPA1-211ENST00000560433 ABCA9Q8IUA7 1624 aa15.71■□□□□ 0.1
SNRPA1-211ENST00000560433 ABCC1P33527 1531 aa15.7■□□□□ 0.1
SNRPA1-211ENST00000560433 PZPP20742 1482 aa15.7■□□□□ 0.1
SNRPA1-211ENST00000560433 PKD2Q13563 968 aa15.69■□□□□ 0.1
SNRPA1-211ENST00000560433 PLEKHH2Q8IVE3 1493 aa15.68■□□□□ 0.1
SNRPA1-211ENST00000560433 PPP1R15AO75807 674 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-211ENST00000560433 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
SNRPA1-211ENST00000560433 CD109Q6YHK3 1445 aa15.67■□□□□ 0.1
SNRPA1-211ENST00000560433 SPAG9O60271 1321 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-211ENST00000560433 SCAPERQ9BY12 1400 aa15.67■□□□□ 0.1
SNRPA1-211ENST00000560433 ADGRL1O94910 1474 aa15.66■□□□□ 0.1
SNRPA1-211ENST00000560433 ANKRD30BQ9BXX2 1392 aa15.65■□□□□ 0.1
SNRPA1-211ENST00000560433 L3MBTL2Q969R5 705 aa15.62■□□□□ 0.09
SNRPA1-211ENST00000560433 TIMELESSQ9UNS1 1208 aa15.62■□□□□ 0.09
SNRPA1-211ENST00000560433 MAST1Q9Y2H9 1570 aa15.62■□□□□ 0.09
SNRPA1-211ENST00000560433 ARAP3Q8WWN8 1544 aa15.62■□□□□ 0.09
SNRPA1-211ENST00000560433 RAPGEF3O95398 923 aa15.59■□□□□ 0.09
SNRPA1-211ENST00000560433 FAM69CQ0P6D2 419 aa15.59■□□□□ 0.09
SNRPA1-211ENST00000560433 PLXNC1O60486 1568 aa15.58■□□□□ 0.09
SNRPA1-211ENST00000560433 ZFYVE16Q7Z3T8 1539 aa15.57■□□□□ 0.08
SNRPA1-211ENST00000560433 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-211ENST00000560433 DUOX2Q9NRD8 1548 aa15.57■□□□□ 0.08
SNRPA1-211ENST00000560433 FAM135AQ9P2D6 1515 aa15.57■□□□□ 0.08
SNRPA1-211ENST00000560433 RPRD2Q5VT52 1461 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-211ENST00000560433 ATP7AQ04656 1500 aa15.55■□□□□ 0.08
SNRPA1-211ENST00000560433 KIF3BO15066 747 aa15.54■□□□□ 0.08
SNRPA1-211ENST00000560433 ZNF326Q5BKZ1 582 aaKnown RBP15.54■□□□□ 0.08
SNRPA1-211ENST00000560433 RTEL1-TNFRSF6BF6WH68 1400 aa15.53■□□□□ 0.08
SNRPA1-211ENST00000560433 ERBINQ96RT1 1412 aa15.52■□□□□ 0.08
SNRPA1-211ENST00000560433 KDM5DQ9BY66 1539 aa15.52■□□□□ 0.08
SNRPA1-211ENST00000560433 NBPF8Q3BBV2 869 aa15.52■□□□□ 0.08
SNRPA1-211ENST00000560433 TSPOAP1O95153 1857 aa15.52■□□□□ 0.08
SNRPA1-211ENST00000560433 INO80Q9ULG1 1556 aaPredicted RBP15.51■□□□□ 0.07
SNRPA1-211ENST00000560433 ZNF518AQ6AHZ1 1483 aa15.51■□□□□ 0.07
SNRPA1-211ENST00000560433 UNC13BO14795 1591 aa15.5■□□□□ 0.07
SNRPA1-211ENST00000560433 MIER1Q8N108 512 aa15.5■□□□□ 0.07
SNRPA1-211ENST00000560433 KDM2AQ9Y2K7 1162 aa15.5■□□□□ 0.07
SNRPA1-211ENST00000560433 KIDINS220Q9ULH0 1771 aa15.5■□□□□ 0.07
SNRPA1-211ENST00000560433 TEX14Q8IWB6 1497 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms