RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 ZFYVE16Q7Z3T8 1539 aa17.8■□□□□ 0.44
APH1B-208ENST00000560353 EFCAB5A4FU69 1503 aa17.79■□□□□ 0.44
APH1B-208ENST00000560353 ZMYM4Q5VZL5 1548 aa17.79■□□□□ 0.44
APH1B-208ENST00000560353 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
APH1B-208ENST00000560353 PREX1Q8TCU6 1659 aa17.77■□□□□ 0.44
APH1B-208ENST00000560353 PLEKHD1A6NEE1 506 aa17.77■□□□□ 0.44
APH1B-208ENST00000560353 FER1L4A9Z1Z3 1794 aa17.76■□□□□ 0.43
APH1B-208ENST00000560353 CFAP74Q9C0B2 1584 aa17.75■□□□□ 0.43
APH1B-208ENST00000560353 CEBPAP49715 358 aaPredicted RBP17.75■□□□□ 0.43
APH1B-208ENST00000560353 PTPRTO14522 1441 aa17.74■□□□□ 0.43
APH1B-208ENST00000560353 STRCQ7RTU9 1775 aa17.74■□□□□ 0.43
APH1B-208ENST00000560353 SIGLEC1Q9BZZ2 1709 aa17.74■□□□□ 0.43
APH1B-208ENST00000560353 PRXQ9BXM0 1461 aa17.74■□□□□ 0.43
APH1B-208ENST00000560353 UHRF1BP1Q6BDS2 1440 aa17.73■□□□□ 0.43
APH1B-208ENST00000560353 ARHGEF12Q9NZN5 1544 aa17.73■□□□□ 0.43
APH1B-208ENST00000560353 RAPGEF6Q8TEU7 1601 aa17.73■□□□□ 0.43
APH1B-208ENST00000560353 IQSEC2Q5JU85 1478 aa17.72■□□□□ 0.43
APH1B-208ENST00000560353 ATP10AO60312 1499 aa17.7■□□□□ 0.42
APH1B-208ENST00000560353 NUP153P49790 1475 aaKnown RBP17.7■□□□□ 0.42
APH1B-208ENST00000560353 HECW1Q76N89 1606 aa17.69■□□□□ 0.42
APH1B-208ENST00000560353 C9orf84Q5VXU9 1444 aa17.67■□□□□ 0.42
APH1B-208ENST00000560353 SCAPERQ9BY12 1400 aa17.67■□□□□ 0.42
APH1B-208ENST00000560353 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
APH1B-208ENST00000560353 LTBP4Q8N2S1 1624 aa17.67■□□□□ 0.42
APH1B-208ENST00000560353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.66■□□□□ 0.42
APH1B-208ENST00000560353 SAMD9Q5K651 1589 aa17.66■□□□□ 0.42
APH1B-208ENST00000560353 CNKSR2Q8WXI2 1034 aa17.64■□□□□ 0.41
APH1B-208ENST00000560353 SETD1BQ9UPS6 1966 aaKnown RBP17.64■□□□□ 0.41
APH1B-208ENST00000560353 UBAP1LF5GYI3 381 aa17.61■□□□□ 0.41
APH1B-208ENST00000560353 PLCH2O75038 1416 aa17.6■□□□□ 0.41
APH1B-208ENST00000560353 EFCAB2Q5VUJ9 269 aa17.58■□□□□ 0.4
APH1B-208ENST00000560353 ESF1Q9H501 851 aaKnown RBP17.57■□□□□ 0.4
APH1B-208ENST00000560353 NCOA1Q15788 1441 aa17.56■□□□□ 0.4
APH1B-208ENST00000560353 TRAPPC8Q9Y2L5 1435 aa17.56■□□□□ 0.4
APH1B-208ENST00000560353 ZNF518AQ6AHZ1 1483 aa17.52■□□□□ 0.4
APH1B-208ENST00000560353 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.4
APH1B-208ENST00000560353 MYT1LQ9UL68 1186 aa17.52■□□□□ 0.4
APH1B-208ENST00000560353 AFAP1Q8N556 730 aa17.51■□□□□ 0.39
APH1B-208ENST00000560353 ZNF335Q9H4Z2 1342 aaPredicted RBP17.49■□□□□ 0.39
APH1B-208ENST00000560353 C3P01024 1663 aa17.49■□□□□ 0.39
APH1B-208ENST00000560353 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
APH1B-208ENST00000560353 REREQ9P2R6 1566 aa17.47■□□□□ 0.39
APH1B-208ENST00000560353 CNTLNQ9NXG0 1405 aa17.46■□□□□ 0.39
APH1B-208ENST00000560353 NCKAP5LQ9HCH0 1330 aa17.46■□□□□ 0.38
APH1B-208ENST00000560353 CAMSAP1Q5T5Y3 1602 aa17.45■□□□□ 0.38
APH1B-208ENST00000560353 KDM5CP41229 1560 aa17.45■□□□□ 0.38
APH1B-208ENST00000560353 AGLP35573 1532 aa17.44■□□□□ 0.38
APH1B-208ENST00000560353 HSPA1LP34931 641 aa17.44■□□□□ 0.38
APH1B-208ENST00000560353 PKD2Q13563 968 aa17.44■□□□□ 0.38
APH1B-208ENST00000560353 CDK11AQ9UQ88 783 aaPredicted RBP17.43■□□□□ 0.38
APH1B-208ENST00000560353 NPATQ14207 1427 aa17.43■□□□□ 0.38
APH1B-208ENST00000560353 MED1Q15648 1581 aaPredicted RBP17.43■□□□□ 0.38
APH1B-208ENST00000560353 DIP2CQ9Y2E4 1556 aa17.43■□□□□ 0.38
APH1B-208ENST00000560353 CDK13Q14004 1512 aaKnown RBP17.42■□□□□ 0.38
APH1B-208ENST00000560353 MLH3Q9UHC1 1453 aa17.42■□□□□ 0.38
APH1B-208ENST00000560353 MYO5CQ9NQX4 1742 aa17.41■□□□□ 0.38
APH1B-208ENST00000560353 TOM1O60784 492 aa17.39■□□□□ 0.37
APH1B-208ENST00000560353 PIP4K2BP78356 416 aa17.39■□□□□ 0.37
APH1B-208ENST00000560353 ARHGAP5Q13017 1502 aa17.38■□□□□ 0.37
APH1B-208ENST00000560353 PLA2R1Q13018 1463 aa17.37■□□□□ 0.37
APH1B-208ENST00000560353 ATP1B4Q9UN42 357 aaPredicted RBP17.36■□□□□ 0.37
APH1B-208ENST00000560353 ZMYM3Q14202 1370 aa17.36■□□□□ 0.37
APH1B-208ENST00000560353 ABCA6Q8N139 1617 aa17.36■□□□□ 0.37
APH1B-208ENST00000560353 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
APH1B-208ENST00000560353 TCOF1Q13428 1488 aaKnown RBP17.33■□□□□ 0.37
APH1B-208ENST00000560353 KIF14Q15058 1648 aa17.31■□□□□ 0.36
APH1B-208ENST00000560353 TROQ12816 1431 aaPredicted RBP17.3■□□□□ 0.36
APH1B-208ENST00000560353 MROH2AA6NES4 1674 aa17.3■□□□□ 0.36
APH1B-208ENST00000560353 CLIP1P30622 1438 aa17.3■□□□□ 0.36
APH1B-208ENST00000560353 HOXD11P31277 338 aaPredicted RBP17.28■□□□□ 0.36
APH1B-208ENST00000560353 FMN1Q68DA7 1419 aa17.27■□□□□ 0.35
APH1B-208ENST00000560353 CPS1P31327 1500 aa17.26■□□□□ 0.35
APH1B-208ENST00000560353 CEP170BQ9Y4F5 1589 aaPredicted RBP17.26■□□□□ 0.35
APH1B-208ENST00000560353 ZNF142P52746 1687 aaPredicted RBP17.26■□□□□ 0.35
APH1B-208ENST00000560353 EEA1Q15075 1411 aa17.24■□□□□ 0.35
APH1B-208ENST00000560353 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
APH1B-208ENST00000560353 ABCC1P33527 1531 aa17.24■□□□□ 0.35
APH1B-208ENST00000560353 KIDINS220Q9ULH0 1771 aa17.24■□□□□ 0.35
APH1B-208ENST00000560353 MYO3AQ8NEV4 1616 aa17.24■□□□□ 0.35
APH1B-208ENST00000560353 SHANK2Q9UPX8 1470 aa17.23■□□□□ 0.35
APH1B-208ENST00000560353 CDC42BPBQ9Y5S2 1711 aa17.21■□□□□ 0.35
APH1B-208ENST00000560353 SUPT6HQ7KZ85 1726 aaKnown RBP17.21■□□□□ 0.35
APH1B-208ENST00000560353 SPAG9O60271 1321 aaKnown RBP17.2■□□□□ 0.34
APH1B-208ENST00000560353 ITSN2Q9NZM3 1697 aa17.19■□□□□ 0.34
APH1B-208ENST00000560353 A2ML1A8K2U0 1454 aa17.18■□□□□ 0.34
APH1B-208ENST00000560353 CLTCQ00610 1675 aaKnown RBP17.17■□□□□ 0.34
APH1B-208ENST00000560353 GGT6Q6P531 493 aa17.17■□□□□ 0.34
APH1B-208ENST00000560353 PREX2Q70Z35 1606 aa17.17■□□□□ 0.34
APH1B-208ENST00000560353 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
APH1B-208ENST00000560353 RGS17Q9UGC6 210 aaPredicted RBP17.15■□□□□ 0.34
APH1B-208ENST00000560353 ANKLE2Q86XL3 938 aa17.14■□□□□ 0.33
APH1B-208ENST00000560353 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
APH1B-208ENST00000560353 DNMT1P26358 1616 aaKnown RBP17.14■□□□□ 0.33
APH1B-208ENST00000560353 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
APH1B-208ENST00000560353 KCNA4P22459 653 aa17.13■□□□□ 0.33
APH1B-208ENST00000560353 A2MP01023 1474 aa17.12■□□□□ 0.33
APH1B-208ENST00000560353 NPM3O75607 178 aaKnown RBP17.12■□□□□ 0.33
APH1B-208ENST00000560353 ALKQ9UM73 1620 aa17.11■□□□□ 0.33
APH1B-208ENST00000560353 HNRNPMP52272 730 aaKnown RBP eCLIP17.11■□□□□ 0.33
APH1B-208ENST00000560353 NEURL4Q96JN8 1562 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms