RNA–Protein interactions for RNA: ENST00000560335.5

NUMB-232, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-232ENST00000560335 PTPN23Q9H3S7 1636 aa10.24□□□□□ -0.77
NUMB-232ENST00000560335 UHRF1BP1LA0JNW5 1464 aa10.23□□□□□ -0.77
NUMB-232ENST00000560335 MIER1Q8N108 512 aa10.22□□□□□ -0.77
NUMB-232ENST00000560335 ZCCHC11Q5TAX3 1644 aaKnown RBP10.22□□□□□ -0.77
NUMB-232ENST00000560335 CDK11AQ9UQ88 783 aaPredicted RBP10.22□□□□□ -0.77
NUMB-232ENST00000560335 NAIPQ13075 1403 aa10.21□□□□□ -0.77
NUMB-232ENST00000560335 KDM5BQ9UGL1 1544 aa10.2□□□□□ -0.78
NUMB-232ENST00000560335 GCC2Q8IWJ2 1684 aa10.2□□□□□ -0.78
NUMB-232ENST00000560335 ATP10BO94823 1461 aa10.2□□□□□ -0.78
NUMB-232ENST00000560335 ROCK1Q13464 1354 aa10.19□□□□□ -0.78
NUMB-232ENST00000560335 NPM1P06748 294 aaKnown RBP eCLIP10.18□□□□□ -0.78
NUMB-232ENST00000560335 TONSLQ96HA7 1378 aa10.17□□□□□ -0.78
NUMB-232ENST00000560335 PTPRKQ15262 1439 aa10.17□□□□□ -0.78
NUMB-232ENST00000560335 KIF13AQ9H1H9 1805 aa10.16□□□□□ -0.78
NUMB-232ENST00000560335 ASXL2Q76L83 1435 aa10.16□□□□□ -0.78
NUMB-232ENST00000560335 PPP1R15AO75807 674 aaPredicted RBP10.16□□□□□ -0.78
NUMB-232ENST00000560335 GTF3C3Q9Y5Q9 886 aa10.15□□□□□ -0.78
NUMB-232ENST00000560335 TRHP20396 242 aaPredicted RBP10.14□□□□□ -0.79
NUMB-232ENST00000560335 KIF14Q15058 1648 aa10.14□□□□□ -0.79
NUMB-232ENST00000560335 TROQ12816 1431 aaPredicted RBP10.13□□□□□ -0.79
NUMB-232ENST00000560335 DIP2BQ9P265 1576 aa10.12□□□□□ -0.79
NUMB-232ENST00000560335 ITSN2Q9NZM3 1697 aa10.12□□□□□ -0.79
NUMB-232ENST00000560335 KCNH8Q96L42 1107 aa10.12□□□□□ -0.79
NUMB-232ENST00000560335 ABCC10Q5T3U5 1492 aa10.12□□□□□ -0.79
NUMB-232ENST00000560335 DNMT1P26358 1616 aaKnown RBP10.12□□□□□ -0.79
NUMB-232ENST00000560335 WDR7Q9Y4E6 1490 aa10.11□□□□□ -0.79
NUMB-232ENST00000560335 DAPK1P53355 1430 aa10.1□□□□□ -0.79
NUMB-232ENST00000560335 FAM69CQ0P6D2 419 aa10.1□□□□□ -0.79
NUMB-232ENST00000560335 SIN3AQ96ST3 1273 aa10.1□□□□□ -0.79
NUMB-232ENST00000560335 TSPOAP1O95153 1857 aa10.1□□□□□ -0.79
NUMB-232ENST00000560335 YTHDC1Q96MU7 727 aaKnown RBP10.09□□□□□ -0.79
NUMB-232ENST00000560335 CCER2I3L3R5 266 aa10.08□□□□□ -0.8
NUMB-232ENST00000560335 PLEKHD1A6NEE1 506 aa10.07□□□□□ -0.8
NUMB-232ENST00000560335 ADGRL2O95490 1459 aa10.07□□□□□ -0.8
NUMB-232ENST00000560335 TTC37Q6PGP7 1564 aa10.07□□□□□ -0.8
NUMB-232ENST00000560335 ABCC5O15440 1437 aa10.06□□□□□ -0.8
NUMB-232ENST00000560335 GLI2P10070 1586 aa10.06□□□□□ -0.8
NUMB-232ENST00000560335 PPRC1Q5VV67 1664 aaKnown RBP10.06□□□□□ -0.8
NUMB-232ENST00000560335 SHANK2Q9UPX8 1470 aa10.06□□□□□ -0.8
NUMB-232ENST00000560335 MAP3K4Q9Y6R4 1608 aa10.05□□□□□ -0.8
NUMB-232ENST00000560335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.04□□□□□ -0.8
NUMB-232ENST00000560335 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
NUMB-232ENST00000560335 MPHOSPH9Q99550 1183 aa10.04□□□□□ -0.8
NUMB-232ENST00000560335 RRP7BPQ9NSQ0 103 aa10.04□□□□□ -0.8
NUMB-232ENST00000560335 ADGBQ8N7X0 1667 aa10.04□□□□□ -0.8
NUMB-232ENST00000560335 GPATCH8Q9UKJ3 1502 aaKnown RBP10.04□□□□□ -0.8
NUMB-232ENST00000560335 ABCA9Q8IUA7 1624 aa10.04□□□□□ -0.8
NUMB-232ENST00000560335 CAMSAP2Q08AD1 1489 aa10.03□□□□□ -0.8
NUMB-232ENST00000560335 ANP32CO43423 234 aa10.03□□□□□ -0.8
NUMB-232ENST00000560335 CFDP1Q9UEE9 299 aaPredicted RBP10.03□□□□□ -0.8
NUMB-232ENST00000560335 RPRD2Q5VT52 1461 aaKnown RBP10.03□□□□□ -0.8
NUMB-232ENST00000560335 TRIM52Q96A61 297 aa10.02□□□□□ -0.81
NUMB-232ENST00000560335 ZNF644Q9H582 1327 aaPredicted RBP10.02□□□□□ -0.81
NUMB-232ENST00000560335 ANKRD30BQ9BXX2 1392 aa10.01□□□□□ -0.81
NUMB-232ENST00000560335 ANKRD30AQ9BXX3 1397 aa10.01□□□□□ -0.81
NUMB-232ENST00000560335 DENND4BO75064 1496 aaPredicted RBP10.01□□□□□ -0.81
NUMB-232ENST00000560335 CROCC2H7BZ55 1655 aa10.01□□□□□ -0.81
NUMB-232ENST00000560335 CDC42BPBQ9Y5S2 1711 aa10.01□□□□□ -0.81
NUMB-232ENST00000560335 NCOA1Q15788 1441 aa10.01□□□□□ -0.81
NUMB-232ENST00000560335 CD109Q6YHK3 1445 aa10.01□□□□□ -0.81
NUMB-232ENST00000560335 RSPH4AQ5TD94 716 aa10□□□□□ -0.81
NUMB-232ENST00000560335 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
NUMB-232ENST00000560335 PREX2Q70Z35 1606 aa10□□□□□ -0.81
NUMB-232ENST00000560335 DDX10Q13206 875 aaKnown RBP9.99□□□□□ -0.81
NUMB-232ENST00000560335 EIF4G2P78344 907 aaKnown RBP eCLIP9.98□□□□□ -0.81
NUMB-232ENST00000560335 ARHGEF5Q12774 1597 aa9.98□□□□□ -0.81
NUMB-232ENST00000560335 KDM6BO15054 1643 aa9.98□□□□□ -0.81
NUMB-232ENST00000560335 MYO5CQ9NQX4 1742 aa9.97□□□□□ -0.81
NUMB-232ENST00000560335 KDM5DQ9BY66 1539 aa9.97□□□□□ -0.81
NUMB-232ENST00000560335 SAMD9LQ8IVG5 1584 aa9.97□□□□□ -0.81
NUMB-232ENST00000560335 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
NUMB-232ENST00000560335 TEX14Q8IWB6 1497 aa9.96□□□□□ -0.81
NUMB-232ENST00000560335 KIAA1107Q9UPP5 1409 aa9.96□□□□□ -0.82
NUMB-232ENST00000560335 COL17A1Q9UMD9 1497 aaPredicted RBP9.96□□□□□ -0.82
NUMB-232ENST00000560335 SLC4A1APQ9BWU0 796 aaKnown RBP9.96□□□□□ -0.82
NUMB-232ENST00000560335 PLCH2O75038 1416 aa9.95□□□□□ -0.82
NUMB-232ENST00000560335 ANKRD50Q9ULJ7 1429 aa9.95□□□□□ -0.82
NUMB-232ENST00000560335 ARHGAP5Q13017 1502 aa9.95□□□□□ -0.82
NUMB-232ENST00000560335 PZPP20742 1482 aa9.94□□□□□ -0.82
NUMB-232ENST00000560335 C9orf84Q5VXU9 1444 aa9.94□□□□□ -0.82
NUMB-232ENST00000560335 FANCAO15360 1455 aa9.94□□□□□ -0.82
NUMB-232ENST00000560335 PLEKHH2Q8IVE3 1493 aa9.94□□□□□ -0.82
NUMB-232ENST00000560335 ARHGEF12Q9NZN5 1544 aa9.94□□□□□ -0.82
NUMB-232ENST00000560335 TSPY4P0CV99 314 aa9.93□□□□□ -0.82
NUMB-232ENST00000560335 TSPY10P0CW01 314 aa9.93□□□□□ -0.82
NUMB-232ENST00000560335 L3MBTL2Q969R5 705 aa9.93□□□□□ -0.82
NUMB-232ENST00000560335 ARID4BQ4LE39 1312 aaPredicted RBP9.93□□□□□ -0.82
NUMB-232ENST00000560335 CCDC141Q6ZP82 1450 aa9.92□□□□□ -0.82
NUMB-232ENST00000560335 SYCP2Q9BX26 1530 aa9.92□□□□□ -0.82
NUMB-232ENST00000560335 HSPA5P11021 654 aaKnown RBP9.91□□□□□ -0.82
NUMB-232ENST00000560335 HNRNPMP52272 730 aaKnown RBP eCLIP9.91□□□□□ -0.82
NUMB-232ENST00000560335 CNTLNQ9NXG0 1405 aa9.91□□□□□ -0.82
NUMB-232ENST00000560335 MBD5Q9P267 1494 aa9.91□□□□□ -0.82
NUMB-232ENST00000560335 MAST1Q9Y2H9 1570 aa9.91□□□□□ -0.82
NUMB-232ENST00000560335 ABCC1P33527 1531 aa9.9□□□□□ -0.82
NUMB-232ENST00000560335 ARAP3Q8WWN8 1544 aa9.9□□□□□ -0.82
NUMB-232ENST00000560335 NEO1Q92859 1461 aa9.9□□□□□ -0.82
NUMB-232ENST00000560335 UHRF1BP1Q6BDS2 1440 aa9.9□□□□□ -0.82
NUMB-232ENST00000560335 SPATA31E1Q6ZUB1 1445 aa9.9□□□□□ -0.82
NUMB-232ENST00000560335 RAPGEF3O95398 923 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms