RNA–Protein interactions for RNA: ENST00000560006.1

SEMA6D-214, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-214ENST00000560006 RTN4Q9NQC3 1192 aaKnown RBP9.08□□□□□ -0.96
SEMA6D-214ENST00000560006 AMER1Q5JTC6 1135 aaPredicted RBP9.07□□□□□ -0.96
SEMA6D-214ENST00000560006 ZNF710Q8N1W2 664 aa9.07□□□□□ -0.96
SEMA6D-214ENST00000560006 CIZ1Q9ULV3 898 aaPredicted RBP9.06□□□□□ -0.96
SEMA6D-214ENST00000560006 TMEM92Q6UXU6 159 aa9.05□□□□□ -0.96
SEMA6D-214ENST00000560006 ERBB3P21860 1342 aa9.05□□□□□ -0.96
SEMA6D-214ENST00000560006 EFCAB3Q8N7B9 438 aa9.04□□□□□ -0.96
SEMA6D-214ENST00000560006 ERCC6Q03468 1493 aa9.02□□□□□ -0.96
SEMA6D-214ENST00000560006 VARS2Q5ST30 1063 aaKnown RBP9.02□□□□□ -0.97
SEMA6D-214ENST00000560006 MICALL2Q8IY33 904 aa9.02□□□□□ -0.97
SEMA6D-214ENST00000560006 RNF166Q96A37 237 aaPredicted RBP9.02□□□□□ -0.97
SEMA6D-214ENST00000560006 ZSWIM6Q9HCJ5 1215 aa9.01□□□□□ -0.97
SEMA6D-214ENST00000560006 RIMBP2O15034 1052 aa9□□□□□ -0.97
SEMA6D-214ENST00000560006 KIF21AQ7Z4S6 1674 aa8.98□□□□□ -0.97
SEMA6D-214ENST00000560006 GPR153Q6NV75 609 aa8.98□□□□□ -0.97
SEMA6D-214ENST00000560006 ZNF687Q8N1G0 1237 aa8.98□□□□□ -0.97
SEMA6D-214ENST00000560006 TRIM41Q8WV44 630 aa8.98□□□□□ -0.97
SEMA6D-214ENST00000560006 CUX2O14529 1486 aa8.97□□□□□ -0.97
SEMA6D-214ENST00000560006 MS4A4AQ96JQ5 239 aa8.97□□□□□ -0.97
SEMA6D-214ENST00000560006 MYT1LQ9UL68 1186 aa8.96□□□□□ -0.98
SEMA6D-214ENST00000560006 NESP48681 1621 aa8.94□□□□□ -0.98
SEMA6D-214ENST00000560006 SOX12O15370 315 aa8.93□□□□□ -0.98
SEMA6D-214ENST00000560006 RNF25Q96BH1 459 aaPredicted RBP8.93□□□□□ -0.98
SEMA6D-214ENST00000560006 SMARCA4P51532 1647 aa8.93□□□□□ -0.98
SEMA6D-214ENST00000560006 THOC2Q8NI27 1593 aaKnown RBP8.92□□□□□ -0.98
SEMA6D-214ENST00000560006 SMARCA2P51531 1590 aa8.91□□□□□ -0.98
SEMA6D-214ENST00000560006 PTGER2P43116 358 aa8.9□□□□□ -0.98
SEMA6D-214ENST00000560006 PHF8Q9UPP1 1060 aa8.89□□□□□ -0.99
SEMA6D-214ENST00000560006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.88□□□□□ -0.99
SEMA6D-214ENST00000560006 RIOK3O14730 519 aaKnown RBP8.88□□□□□ -0.99
SEMA6D-214ENST00000560006 ZFP91Q96JP5 570 aaPredicted RBP8.88□□□□□ -0.99
SEMA6D-214ENST00000560006 HMGXB3Q12766 1538 aa8.86□□□□□ -0.99
SEMA6D-214ENST00000560006 ARSIQ5FYB1 569 aa8.86□□□□□ -0.99
SEMA6D-214ENST00000560006 ATAD2BQ9ULI0 1458 aa8.85□□□□□ -0.99
SEMA6D-214ENST00000560006 VGFO15240 615 aaPredicted RBP8.85□□□□□ -0.99
SEMA6D-214ENST00000560006 NCAPD3P42695 1498 aa8.84□□□□□ -0.99
SEMA6D-214ENST00000560006 ZNF316A6NFI3 1004 aaPredicted RBP8.84□□□□□ -0.99
SEMA6D-214ENST00000560006 FBXO22Q8NEZ5 403 aa8.83□□□□□ -1
SEMA6D-214ENST00000560006 KHSRPQ92945 711 aaKnown RBP eCLIP8.83□□□□□ -1
SEMA6D-214ENST00000560006 BAZ1BQ9UIG0 1483 aaKnown RBP8.82□□□□□ -1
SEMA6D-214ENST00000560006 LSM11P83369 360 aaKnown RBP eCLIP8.81□□□□□ -1
SEMA6D-214ENST00000560006 KIF3CO14782 793 aa8.8□□□□□ -1
SEMA6D-214ENST00000560006 ANKRD13DQ6ZTN6 518 aa8.8□□□□□ -1
SEMA6D-214ENST00000560006 LAMC3Q9Y6N6 1575 aa8.8□□□□□ -1
SEMA6D-214ENST00000560006 NLRP6P59044 892 aa8.78□□□□□ -1
SEMA6D-214ENST00000560006 BAZ1AQ9NRL2 1556 aaPredicted RBP8.78□□□□□ -1
SEMA6D-214ENST00000560006 POTEEQ6S8J3 1075 aa8.77□□□□□ -1.01
SEMA6D-214ENST00000560006 PBX2P40425 430 aa8.76□□□□□ -1.01
SEMA6D-214ENST00000560006 MFRPQ9BY79 579 aa8.75□□□□□ -1.01
SEMA6D-214ENST00000560006 WIZO95785 1651 aa8.75□□□□□ -1.01
SEMA6D-214ENST00000560006 BCL11BQ9C0K0 894 aaPredicted RBP8.74□□□□□ -1.01
SEMA6D-214ENST00000560006 MROH2BQ7Z745 1585 aa8.73□□□□□ -1.01
SEMA6D-214ENST00000560006 C2orf72A6NCS6 295 aa8.73□□□□□ -1.01
SEMA6D-214ENST00000560006 NUDT7P0C024 238 aa8.73□□□□□ -1.01
SEMA6D-214ENST00000560006 PKD2Q13563 968 aa8.73□□□□□ -1.01
SEMA6D-214ENST00000560006 PEG3Q9GZU2 1588 aa8.73□□□□□ -1.01
SEMA6D-214ENST00000560006 SLC34A2O95436 690 aa8.72□□□□□ -1.01
SEMA6D-214ENST00000560006 PRDM2Q13029 1718 aa8.71□□□□□ -1.01
SEMA6D-214ENST00000560006 LHX6Q9UPM6 363 aa8.71□□□□□ -1.02
SEMA6D-214ENST00000560006 PCDHGA4Q9Y5G9 962 aa8.7□□□□□ -1.02
SEMA6D-214ENST00000560006 AXIN2Q9Y2T1 843 aa8.68□□□□□ -1.02
SEMA6D-214ENST00000560006 WDR62O43379 1518 aa8.67□□□□□ -1.02
SEMA6D-214ENST00000560006 MRC2Q9UBG0 1479 aa8.67□□□□□ -1.02
SEMA6D-214ENST00000560006 STK24Q9Y6E0 443 aa8.67□□□□□ -1.02
SEMA6D-214ENST00000560006 PDS5BQ9NTI5 1447 aa8.66□□□□□ -1.02
SEMA6D-214ENST00000560006 ECM2O94769 699 aaPredicted RBP8.66□□□□□ -1.02
SEMA6D-214ENST00000560006 PLA2G2EQ9NZK7 142 aa8.66□□□□□ -1.02
SEMA6D-214ENST00000560006 KDM4FA0A1W2PPD8 638 aa8.65□□□□□ -1.02
SEMA6D-214ENST00000560006 TAOK2Q9UL54 1235 aa8.65□□□□□ -1.02
SEMA6D-214ENST00000560006 ADGRD1Q6QNK2 874 aa8.64□□□□□ -1.03
SEMA6D-214ENST00000560006 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
SEMA6D-214ENST00000560006 STK25O00506 426 aa8.62□□□□□ -1.03
SEMA6D-214ENST00000560006 CEP164Q9UPV0 1460 aa8.62□□□□□ -1.03
SEMA6D-214ENST00000560006 RIMBP3CA6NJZ7 1639 aa8.62□□□□□ -1.03
SEMA6D-214ENST00000560006 RIMBP3BA6NNM3 1639 aa8.62□□□□□ -1.03
SEMA6D-214ENST00000560006 RIMBP3Q9UFD9 1639 aa8.62□□□□□ -1.03
SEMA6D-214ENST00000560006 ARHGAP33O14559 1287 aa8.61□□□□□ -1.03
SEMA6D-214ENST00000560006 CHD1O14646 1710 aa8.6□□□□□ -1.03
SEMA6D-214ENST00000560006 HRO43593 1189 aa8.6□□□□□ -1.03
SEMA6D-214ENST00000560006 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
SEMA6D-214ENST00000560006 TK2O00142 265 aa8.59□□□□□ -1.03
SEMA6D-214ENST00000560006 TMC2Q8TDI7 906 aa8.59□□□□□ -1.03
SEMA6D-214ENST00000560006 CADPSQ9ULU8 1353 aa8.58□□□□□ -1.04
SEMA6D-214ENST00000560006 RGL2O15211 777 aa8.57□□□□□ -1.04
SEMA6D-214ENST00000560006 DMRTA1Q5VZB9 504 aa8.57□□□□□ -1.04
SEMA6D-214ENST00000560006 PTCD2Q8WV60 388 aaKnown RBP8.57□□□□□ -1.04
SEMA6D-214ENST00000560006 FANCD2Q9BXW9 1451 aa8.57□□□□□ -1.04
SEMA6D-214ENST00000560006 PPP1R37O75864 691 aa8.55□□□□□ -1.04
SEMA6D-214ENST00000560006 PSEN2P49810 448 aa8.54□□□□□ -1.04
SEMA6D-214ENST00000560006 URB2Q14146 1524 aaKnown RBP8.54□□□□□ -1.04
SEMA6D-214ENST00000560006 SLC24A1O60721 1099 aa8.51□□□□□ -1.05
SEMA6D-214ENST00000560006 FOXK1P85037 733 aa8.51□□□□□ -1.05
SEMA6D-214ENST00000560006 EIF4G3O43432 1585 aaKnown RBP8.51□□□□□ -1.05
SEMA6D-214ENST00000560006 TOP2AP11388 1531 aaKnown RBP8.49□□□□□ -1.05
SEMA6D-214ENST00000560006 PPP4R3BQ5MIZ7 849 aa8.49□□□□□ -1.05
SEMA6D-214ENST00000560006 KCTD12Q96CX2 325 aaKnown RBP8.48□□□□□ -1.05
SEMA6D-214ENST00000560006 ARHGEF11O15085 1522 aa8.48□□□□□ -1.05
SEMA6D-214ENST00000560006 PLPP6Q8IY26 295 aa8.47□□□□□ -1.05
SEMA6D-214ENST00000560006 ZNF608Q9ULD9 1512 aaPredicted RBP8.47□□□□□ -1.05
SEMA6D-214ENST00000560006 CFTRP13569 1480 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms