RNA–Protein interactions for RNA: ENST00000559833.5

TRIP4-208, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-208ENST00000559833 KDM6BO15054 1643 aa14.92□□□□□ -0.02
TRIP4-208ENST00000559833 ZCCHC11Q5TAX3 1644 aaKnown RBP14.92□□□□□ -0.02
TRIP4-208ENST00000559833 EPRSP07814 1512 aaKnown RBP14.92□□□□□ -0.02
TRIP4-208ENST00000559833 GOLGA3Q08378 1498 aa14.91□□□□□ -0.02
TRIP4-208ENST00000559833 CSRNP3Q8WYN3 585 aa14.88□□□□□ -0.03
TRIP4-208ENST00000559833 ABCA8O94911 1581 aa14.88□□□□□ -0.03
TRIP4-208ENST00000559833 MAP3K4Q9Y6R4 1608 aa14.88□□□□□ -0.03
TRIP4-208ENST00000559833 COL17A1Q9UMD9 1497 aaPredicted RBP14.85□□□□□ -0.03
TRIP4-208ENST00000559833 WDR7Q9Y4E6 1490 aa14.84□□□□□ -0.03
TRIP4-208ENST00000559833 KDM4FA0A1W2PPD8 638 aa14.84□□□□□ -0.03
TRIP4-208ENST00000559833 EEA1Q15075 1411 aa14.81□□□□□ -0.04
TRIP4-208ENST00000559833 SAMD9Q5K651 1589 aa14.81□□□□□ -0.04
TRIP4-208ENST00000559833 TEX14Q8IWB6 1497 aa14.79□□□□□ -0.04
TRIP4-208ENST00000559833 MAGI3Q5TCQ9 1506 aa14.77□□□□□ -0.04
TRIP4-208ENST00000559833 ATP10BO94823 1461 aa14.77□□□□□ -0.04
TRIP4-208ENST00000559833 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.05
TRIP4-208ENST00000559833 P3H3Q8IVL6 736 aa14.75□□□□□ -0.05
TRIP4-208ENST00000559833 FARP1Q9Y4F1 1045 aaPredicted RBP14.75□□□□□ -0.05
TRIP4-208ENST00000559833 CD109Q6YHK3 1445 aa14.75□□□□□ -0.05
TRIP4-208ENST00000559833 KCNH8Q96L42 1107 aa14.74□□□□□ -0.05
TRIP4-208ENST00000559833 LHX8Q68G74 356 aa14.73□□□□□ -0.05
TRIP4-208ENST00000559833 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
TRIP4-208ENST00000559833 CD44P16070 742 aaKnown RBP14.71□□□□□ -0.05
TRIP4-208ENST00000559833 KIF21BO75037 1637 aa14.69□□□□□ -0.06
TRIP4-208ENST00000559833 RAPGEF6Q8TEU7 1601 aa14.69□□□□□ -0.06
TRIP4-208ENST00000559833 POTEIP0CG38 1075 aa14.68□□□□□ -0.06
TRIP4-208ENST00000559833 ABCA9Q8IUA7 1624 aa14.67□□□□□ -0.06
TRIP4-208ENST00000559833 NUP153P49790 1475 aaKnown RBP14.67□□□□□ -0.06
TRIP4-208ENST00000559833 ARAP3Q8WWN8 1544 aa14.66□□□□□ -0.06
TRIP4-208ENST00000559833 ADGRL1O94910 1474 aa14.66□□□□□ -0.06
TRIP4-208ENST00000559833 PHLDB1Q86UU1 1377 aa14.64□□□□□ -0.07
TRIP4-208ENST00000559833 ARID3CA6NKF2 412 aa14.64□□□□□ -0.07
TRIP4-208ENST00000559833 FHOD3Q2V2M9 1422 aa14.64□□□□□ -0.07
TRIP4-208ENST00000559833 EFCAB5A4FU69 1503 aa14.62□□□□□ -0.07
TRIP4-208ENST00000559833 NEO1Q92859 1461 aa14.59□□□□□ -0.07
TRIP4-208ENST00000559833 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.08
TRIP4-208ENST00000559833 ILDR1Q86SU0 546 aaPredicted RBP14.57□□□□□ -0.08
TRIP4-208ENST00000559833 PLEKHD1A6NEE1 506 aa14.56□□□□□ -0.08
TRIP4-208ENST00000559833 CLCN6P51797 869 aa14.56□□□□□ -0.08
TRIP4-208ENST00000559833 CREBZFQ9NS37 354 aa14.55□□□□□ -0.08
TRIP4-208ENST00000559833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRIP4-208ENST00000559833 ARHGAP35Q9NRY4 1499 aa14.53□□□□□ -0.08
TRIP4-208ENST00000559833 RAPGEF3O95398 923 aa14.53□□□□□ -0.08
TRIP4-208ENST00000559833 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
TRIP4-208ENST00000559833 FRMPD1Q5SYB0 1578 aa14.51□□□□□ -0.09
TRIP4-208ENST00000559833 ZNF579Q8NAF0 562 aaKnown RBP14.51□□□□□ -0.09
TRIP4-208ENST00000559833 FMN1Q68DA7 1419 aa14.49□□□□□ -0.09
TRIP4-208ENST00000559833 CDK13Q14004 1512 aaKnown RBP14.49□□□□□ -0.09
TRIP4-208ENST00000559833 AKNAQ7Z591 1439 aa14.49□□□□□ -0.09
TRIP4-208ENST00000559833 TTC37Q6PGP7 1564 aa14.47□□□□□ -0.09
TRIP4-208ENST00000559833 RICTORQ6R327 1708 aa14.47□□□□□ -0.09
TRIP4-208ENST00000559833 ADAMTSL3P82987 1691 aa14.47□□□□□ -0.09
TRIP4-208ENST00000559833 FANCAO15360 1455 aa14.47□□□□□ -0.09
TRIP4-208ENST00000559833 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
TRIP4-208ENST00000559833 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
TRIP4-208ENST00000559833 PLCH2O75038 1416 aa14.46□□□□□ -0.09
TRIP4-208ENST00000559833 DENND4BO75064 1496 aaPredicted RBP14.45□□□□□ -0.1
TRIP4-208ENST00000559833 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
TRIP4-208ENST00000559833 CFAP74Q9C0B2 1584 aa14.45□□□□□ -0.1
TRIP4-208ENST00000559833 HECW1Q76N89 1606 aa14.44□□□□□ -0.1
TRIP4-208ENST00000559833 HECW2Q9P2P5 1572 aa14.44□□□□□ -0.1
TRIP4-208ENST00000559833 ZMYM4Q5VZL5 1548 aa14.42□□□□□ -0.1
TRIP4-208ENST00000559833 BCORL1Q5H9F3 1711 aa14.42□□□□□ -0.1
TRIP4-208ENST00000559833 DCBLD2Q96PD2 775 aa14.42□□□□□ -0.1
TRIP4-208ENST00000559833 LRRIQ1Q96JM4 1722 aa14.41□□□□□ -0.1
TRIP4-208ENST00000559833 SPDYE4A6NLX3 237 aa14.41□□□□□ -0.1
TRIP4-208ENST00000559833 CDK11AQ9UQ88 783 aaPredicted RBP14.41□□□□□ -0.1
TRIP4-208ENST00000559833 PTPRMP28827 1452 aa14.4□□□□□ -0.1
TRIP4-208ENST00000559833 MAGI2Q86UL8 1455 aa14.4□□□□□ -0.1
TRIP4-208ENST00000559833 ARHGEF40Q8TER5 1519 aa14.4□□□□□ -0.1
TRIP4-208ENST00000559833 TROQ12816 1431 aaPredicted RBP14.38□□□□□ -0.11
TRIP4-208ENST00000559833 SCAPERQ9BY12 1400 aa14.38□□□□□ -0.11
TRIP4-208ENST00000559833 KIF14Q15058 1648 aa14.37□□□□□ -0.11
TRIP4-208ENST00000559833 ATP1B4Q9UN42 357 aaPredicted RBP14.37□□□□□ -0.11
TRIP4-208ENST00000559833 CASKIN1Q8WXD9 1431 aa14.37□□□□□ -0.11
TRIP4-208ENST00000559833 YEATS2Q9ULM3 1422 aa14.37□□□□□ -0.11
TRIP4-208ENST00000559833 SIGLEC1Q9BZZ2 1709 aa14.36□□□□□ -0.11
TRIP4-208ENST00000559833 MYO5CQ9NQX4 1742 aa14.36□□□□□ -0.11
TRIP4-208ENST00000559833 POGZQ7Z3K3 1410 aa14.36□□□□□ -0.11
TRIP4-208ENST00000559833 EFCAB2Q5VUJ9 269 aa14.36□□□□□ -0.11
TRIP4-208ENST00000559833 MADDQ8WXG6 1647 aa14.36□□□□□ -0.11
TRIP4-208ENST00000559833 GALR2O43603 387 aaPredicted RBP14.35□□□□□ -0.11
TRIP4-208ENST00000559833 ZFYVE16Q7Z3T8 1539 aa14.34□□□□□ -0.11
TRIP4-208ENST00000559833 ARID4BQ4LE39 1312 aaPredicted RBP14.33□□□□□ -0.12
TRIP4-208ENST00000559833 CDC42BPBQ9Y5S2 1711 aa14.32□□□□□ -0.12
TRIP4-208ENST00000559833 CLIP1P30622 1438 aa14.32□□□□□ -0.12
TRIP4-208ENST00000559833 PCF11O94913 1555 aaKnown RBP14.31□□□□□ -0.12
TRIP4-208ENST00000559833 ATP10AO60312 1499 aa14.31□□□□□ -0.12
TRIP4-208ENST00000559833 CCDC18Q5T9S5 1454 aa14.31□□□□□ -0.12
TRIP4-208ENST00000559833 KDM5CP41229 1560 aa14.3□□□□□ -0.12
TRIP4-208ENST00000559833 MNX1P50219 401 aaPredicted RBP14.29□□□□□ -0.12
TRIP4-208ENST00000559833 ZNF518AQ6AHZ1 1483 aa14.29□□□□□ -0.12
TRIP4-208ENST00000559833 ARHGAP5Q13017 1502 aa14.28□□□□□ -0.12
TRIP4-208ENST00000559833 RIMS1Q86UR5 1692 aaKnown RBP14.28□□□□□ -0.12
TRIP4-208ENST00000559833 AFAP1Q8N556 730 aa14.28□□□□□ -0.12
TRIP4-208ENST00000559833 FYCO1Q9BQS8 1478 aa14.28□□□□□ -0.12
TRIP4-208ENST00000559833 PREX2Q70Z35 1606 aa14.26□□□□□ -0.13
TRIP4-208ENST00000559833 ARHGEF12Q9NZN5 1544 aa14.26□□□□□ -0.13
TRIP4-208ENST00000559833 LMTK3Q96Q04 1460 aa14.26□□□□□ -0.13
TRIP4-208ENST00000559833 PHF12Q96QT6 1004 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms