RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
CTDSPL2-208ENST00000559793 SPOCK2Q92563 424 aa14.14□□□□□ -0.15
CTDSPL2-208ENST00000559793 TSPYL2Q9H2G4 693 aaPredicted RBP14.14□□□□□ -0.15
CTDSPL2-208ENST00000559793 PTPRGP23470 1445 aa14.13□□□□□ -0.15
CTDSPL2-208ENST00000559793 TTBK1Q5TCY1 1321 aaPredicted RBP14.13□□□□□ -0.15
CTDSPL2-208ENST00000559793 CUL7Q14999 1698 aa14.11□□□□□ -0.15
CTDSPL2-208ENST00000559793 KDM6BO15054 1643 aa14.11□□□□□ -0.15
CTDSPL2-208ENST00000559793 CARMIL1Q5VZK9 1371 aa14.1□□□□□ -0.15
CTDSPL2-208ENST00000559793 ZNF579Q8NAF0 562 aaKnown RBP14.1□□□□□ -0.15
CTDSPL2-208ENST00000559793 FAM212AQ96EL1 285 aa14.08□□□□□ -0.16
CTDSPL2-208ENST00000559793 CCDC61Q9Y6R9 512 aa14.07□□□□□ -0.16
CTDSPL2-208ENST00000559793 TNIKQ9UKE5 1360 aa14.07□□□□□ -0.16
CTDSPL2-208ENST00000559793 CARMIL2Q6F5E8 1435 aa14.05□□□□□ -0.16
CTDSPL2-208ENST00000559793 ABCC2Q92887 1545 aa14.05□□□□□ -0.16
CTDSPL2-208ENST00000559793 DCAF8Q5TAQ9 597 aa14.04□□□□□ -0.16
CTDSPL2-208ENST00000559793 ASXL2Q76L83 1435 aa14.03□□□□□ -0.16
CTDSPL2-208ENST00000559793 PHF12Q96QT6 1004 aa14.02□□□□□ -0.17
CTDSPL2-208ENST00000559793 PLB1Q6P1J6 1458 aa14.01□□□□□ -0.17
CTDSPL2-208ENST00000559793 IQGAP2Q13576 1575 aa14□□□□□ -0.17
CTDSPL2-208ENST00000559793 GABBR2O75899 941 aa14□□□□□ -0.17
CTDSPL2-208ENST00000559793 CLCN6P51797 869 aa14□□□□□ -0.17
CTDSPL2-208ENST00000559793 GSE1Q14687 1217 aa14□□□□□ -0.17
CTDSPL2-208ENST00000559793 PPRC1Q5VV67 1664 aaKnown RBP14□□□□□ -0.17
CTDSPL2-208ENST00000559793 GLI2P10070 1586 aa14□□□□□ -0.17
CTDSPL2-208ENST00000559793 DISP1Q96F81 1524 aa14□□□□□ -0.17
CTDSPL2-208ENST00000559793 UHRF1BP1LA0JNW5 1464 aa13.99□□□□□ -0.17
CTDSPL2-208ENST00000559793 UACAQ9BZF9 1416 aa13.99□□□□□ -0.17
CTDSPL2-208ENST00000559793 COL17A1Q9UMD9 1497 aaPredicted RBP13.98□□□□□ -0.17
CTDSPL2-208ENST00000559793 KDM5BQ9UGL1 1544 aa13.95□□□□□ -0.18
CTDSPL2-208ENST00000559793 KIF12Q96FN5 646 aa13.94□□□□□ -0.18
CTDSPL2-208ENST00000559793 EPRSP07814 1512 aaKnown RBP13.94□□□□□ -0.18
CTDSPL2-208ENST00000559793 CIZ1Q9ULV3 898 aaPredicted RBP13.93□□□□□ -0.18
CTDSPL2-208ENST00000559793 UGGT2Q9NYU1 1516 aa13.93□□□□□ -0.18
CTDSPL2-208ENST00000559793 RAPGEF2Q9Y4G8 1499 aa13.93□□□□□ -0.18
CTDSPL2-208ENST00000559793 ILDR1Q86SU0 546 aaPredicted RBP13.92□□□□□ -0.18
CTDSPL2-208ENST00000559793 MAP3K4Q9Y6R4 1608 aa13.91□□□□□ -0.18
CTDSPL2-208ENST00000559793 ADGRL1O94910 1474 aa13.91□□□□□ -0.18
CTDSPL2-208ENST00000559793 ZCCHC11Q5TAX3 1644 aaKnown RBP13.9□□□□□ -0.18
CTDSPL2-208ENST00000559793 MAP3K13O43283 966 aa13.88□□□□□ -0.19
CTDSPL2-208ENST00000559793 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
CTDSPL2-208ENST00000559793 KIAA0556O60303 1618 aa13.87□□□□□ -0.19
CTDSPL2-208ENST00000559793 PYGBP11216 843 aa13.87□□□□□ -0.19
CTDSPL2-208ENST00000559793 TEX14Q8IWB6 1497 aa13.87□□□□□ -0.19
CTDSPL2-208ENST00000559793 MS4A3Q96HJ5 214 aa13.86□□□□□ -0.19
CTDSPL2-208ENST00000559793 CHRM1P11229 460 aaPredicted RBP13.85□□□□□ -0.19
CTDSPL2-208ENST00000559793 KCNH8Q96L42 1107 aa13.85□□□□□ -0.19
CTDSPL2-208ENST00000559793 SGIP1Q9BQI5 828 aa13.84□□□□□ -0.19
CTDSPL2-208ENST00000559793 WDR7Q9Y4E6 1490 aa13.84□□□□□ -0.19
CTDSPL2-208ENST00000559793 PCDHB13Q9Y5F0 798 aa13.81□□□□□ -0.2
CTDSPL2-208ENST00000559793 CD109Q6YHK3 1445 aa13.81□□□□□ -0.2
CTDSPL2-208ENST00000559793 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
CTDSPL2-208ENST00000559793 MAGI3Q5TCQ9 1506 aa13.79□□□□□ -0.2
CTDSPL2-208ENST00000559793 ABCA8O94911 1581 aa13.79□□□□□ -0.2
CTDSPL2-208ENST00000559793 GOLGA3Q08378 1498 aa13.78□□□□□ -0.2
CTDSPL2-208ENST00000559793 HECW2Q9P2P5 1572 aa13.78□□□□□ -0.2
CTDSPL2-208ENST00000559793 CFAP43Q8NDM7 1665 aa13.77□□□□□ -0.21
CTDSPL2-208ENST00000559793 IFNL1Q8IU54 200 aa13.76□□□□□ -0.21
CTDSPL2-208ENST00000559793 PKD2Q13563 968 aa13.74□□□□□ -0.21
CTDSPL2-208ENST00000559793 P3H3Q8IVL6 736 aa13.74□□□□□ -0.21
CTDSPL2-208ENST00000559793 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
CTDSPL2-208ENST00000559793 ARID3CA6NKF2 412 aa13.73□□□□□ -0.21
CTDSPL2-208ENST00000559793 DCBLD2Q96PD2 775 aa13.73□□□□□ -0.21
CTDSPL2-208ENST00000559793 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
CTDSPL2-208ENST00000559793 TRPC6Q9Y210 931 aa13.72□□□□□ -0.21
CTDSPL2-208ENST00000559793 PCDHB8Q9UN66 801 aa13.71□□□□□ -0.21
CTDSPL2-208ENST00000559793 ATP10BO94823 1461 aa13.71□□□□□ -0.21
CTDSPL2-208ENST00000559793 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
CTDSPL2-208ENST00000559793 ARAP3Q8WWN8 1544 aa13.69□□□□□ -0.22
CTDSPL2-208ENST00000559793 FAM9AQ8IZU1 332 aaPredicted RBP13.69□□□□□ -0.22
CTDSPL2-208ENST00000559793 KIF21BO75037 1637 aa13.68□□□□□ -0.22
CTDSPL2-208ENST00000559793 TIE1P35590 1138 aa13.67□□□□□ -0.22
CTDSPL2-208ENST00000559793 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
CTDSPL2-208ENST00000559793 RAPGEF3O95398 923 aa13.66□□□□□ -0.22
CTDSPL2-208ENST00000559793 ASTLQ6HA08 431 aaPredicted RBP13.65□□□□□ -0.22
CTDSPL2-208ENST00000559793 PHLDB1Q86UU1 1377 aa13.64□□□□□ -0.23
CTDSPL2-208ENST00000559793 ATMINO43313 823 aaPredicted RBP13.64□□□□□ -0.23
CTDSPL2-208ENST00000559793 BMP2KQ9NSY1 1161 aaPredicted RBP13.64□□□□□ -0.23
CTDSPL2-208ENST00000559793 ABCA9Q8IUA7 1624 aa13.64□□□□□ -0.23
CTDSPL2-208ENST00000559793 RNF25Q96BH1 459 aaPredicted RBP13.62□□□□□ -0.23
CTDSPL2-208ENST00000559793 ADAMTSL3P82987 1691 aa13.6□□□□□ -0.23
CTDSPL2-208ENST00000559793 TTLL13PA6NNM8 815 aa13.6□□□□□ -0.23
CTDSPL2-208ENST00000559793 PTPRMP28827 1452 aa13.6□□□□□ -0.23
CTDSPL2-208ENST00000559793 SAMD9Q5K651 1589 aa13.59□□□□□ -0.23
CTDSPL2-208ENST00000559793 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
CTDSPL2-208ENST00000559793 NEO1Q92859 1461 aa13.59□□□□□ -0.23
CTDSPL2-208ENST00000559793 RAPGEF6Q8TEU7 1601 aa13.58□□□□□ -0.24
CTDSPL2-208ENST00000559793 RIOK3O14730 519 aaKnown RBP13.58□□□□□ -0.24
CTDSPL2-208ENST00000559793 RANGAP1P46060 587 aaPredicted RBP13.58□□□□□ -0.24
CTDSPL2-208ENST00000559793 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
CTDSPL2-208ENST00000559793 PDAP1Q13442 181 aaKnown RBP13.57□□□□□ -0.24
CTDSPL2-208ENST00000559793 FBXO41Q8TF61 875 aa13.57□□□□□ -0.24
CTDSPL2-208ENST00000559793 TMEM106CQ9BVX2 250 aa13.57□□□□□ -0.24
CTDSPL2-208ENST00000559793 PSEN1P49768 467 aa13.56□□□□□ -0.24
CTDSPL2-208ENST00000559793 ARID4BQ4LE39 1312 aaPredicted RBP13.56□□□□□ -0.24
CTDSPL2-208ENST00000559793 NUP153P49790 1475 aaKnown RBP13.55□□□□□ -0.24
CTDSPL2-208ENST00000559793 PLEKHD1A6NEE1 506 aa13.55□□□□□ -0.24
CTDSPL2-208ENST00000559793 RGL2O15211 777 aa13.55□□□□□ -0.24
CTDSPL2-208ENST00000559793 BCORL1Q5H9F3 1711 aa13.55□□□□□ -0.24
CTDSPL2-208ENST00000559793 FRMPD1Q5SYB0 1578 aa13.54□□□□□ -0.24
CTDSPL2-208ENST00000559793 FHOD3Q2V2M9 1422 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms