RNA–Protein interactions for RNA: ENST00000559304.5

KNSTRN-206, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-206ENST00000559304 RICTORQ6R327 1708 aa17.13■□□□□ 0.33
KNSTRN-206ENST00000559304 ZFYVE16Q7Z3T8 1539 aa17.13■□□□□ 0.33
KNSTRN-206ENST00000559304 DENND4BO75064 1496 aaPredicted RBP17.12■□□□□ 0.33
KNSTRN-206ENST00000559304 SETD1BQ9UPS6 1966 aaKnown RBP17.12■□□□□ 0.33
KNSTRN-206ENST00000559304 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
KNSTRN-206ENST00000559304 TOM1O60784 492 aa17.11■□□□□ 0.33
KNSTRN-206ENST00000559304 UGGT2Q9NYU1 1516 aa17.1■□□□□ 0.33
KNSTRN-206ENST00000559304 FHOD3Q2V2M9 1422 aa17.08■□□□□ 0.32
KNSTRN-206ENST00000559304 ABCA8O94911 1581 aa17.07■□□□□ 0.32
KNSTRN-206ENST00000559304 MAPK8IP2Q13387 824 aaPredicted RBP17.07■□□□□ 0.32
KNSTRN-206ENST00000559304 SETD1AO15047 1707 aaKnown RBP17.07■□□□□ 0.32
KNSTRN-206ENST00000559304 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
KNSTRN-206ENST00000559304 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
KNSTRN-206ENST00000559304 POTEAQ6S8J7 498 aa17.04■□□□□ 0.32
KNSTRN-206ENST00000559304 CAMSAP1Q5T5Y3 1602 aa17.03■□□□□ 0.32
KNSTRN-206ENST00000559304 NCKAP5LQ9HCH0 1330 aa17.02■□□□□ 0.32
KNSTRN-206ENST00000559304 ARID3CA6NKF2 412 aa17.01■□□□□ 0.31
KNSTRN-206ENST00000559304 KIF27Q86VH2 1401 aa17.01■□□□□ 0.31
KNSTRN-206ENST00000559304 MAGI2Q86UL8 1455 aa17■□□□□ 0.31
KNSTRN-206ENST00000559304 C3P01024 1663 aa16.97■□□□□ 0.31
KNSTRN-206ENST00000559304 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.31
KNSTRN-206ENST00000559304 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.3
KNSTRN-206ENST00000559304 HECW1Q76N89 1606 aa16.95■□□□□ 0.3
KNSTRN-206ENST00000559304 UPF1Q92900 1129 aaKnown RBP eCLIP16.94■□□□□ 0.3
KNSTRN-206ENST00000559304 ATP10AO60312 1499 aa16.93■□□□□ 0.3
KNSTRN-206ENST00000559304 ATP10BO94823 1461 aa16.92■□□□□ 0.3
KNSTRN-206ENST00000559304 CFAP74Q9C0B2 1584 aa16.91■□□□□ 0.3
KNSTRN-206ENST00000559304 PTPRKQ15262 1439 aa16.91■□□□□ 0.3
KNSTRN-206ENST00000559304 ALKQ9UM73 1620 aa16.9■□□□□ 0.3
KNSTRN-206ENST00000559304 PKD2Q13563 968 aa16.89■□□□□ 0.29
KNSTRN-206ENST00000559304 CPS1P31327 1500 aa16.89■□□□□ 0.29
KNSTRN-206ENST00000559304 PLA2R1Q13018 1463 aa16.85■□□□□ 0.29
KNSTRN-206ENST00000559304 GOLGA3Q08378 1498 aa16.83■□□□□ 0.28
KNSTRN-206ENST00000559304 TCOF1Q13428 1488 aaKnown RBP16.83■□□□□ 0.28
KNSTRN-206ENST00000559304 ESF1Q9H501 851 aaKnown RBP16.82■□□□□ 0.28
KNSTRN-206ENST00000559304 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
KNSTRN-206ENST00000559304 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
KNSTRN-206ENST00000559304 SUPT6HQ7KZ85 1726 aaKnown RBP16.78■□□□□ 0.28
KNSTRN-206ENST00000559304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
KNSTRN-206ENST00000559304 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
KNSTRN-206ENST00000559304 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
KNSTRN-206ENST00000559304 NPATQ14207 1427 aa16.75■□□□□ 0.27
KNSTRN-206ENST00000559304 ZNF142P52746 1687 aaPredicted RBP16.73■□□□□ 0.27
KNSTRN-206ENST00000559304 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
KNSTRN-206ENST00000559304 CNTLNQ9NXG0 1405 aa16.7■□□□□ 0.26
KNSTRN-206ENST00000559304 MYO3AQ8NEV4 1616 aa16.7■□□□□ 0.26
KNSTRN-206ENST00000559304 CEP170BQ9Y4F5 1589 aaPredicted RBP16.7■□□□□ 0.26
KNSTRN-206ENST00000559304 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
KNSTRN-206ENST00000559304 AGLP35573 1532 aa16.68■□□□□ 0.26
KNSTRN-206ENST00000559304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.68■□□□□ 0.267e-7■■□□□ 13.6
KNSTRN-206ENST00000559304 RNF17Q9BXT8 1623 aaKnown RBP16.67■□□□□ 0.26
KNSTRN-206ENST00000559304 CTTNBP2Q8WZ74 1663 aa16.67■□□□□ 0.26
KNSTRN-206ENST00000559304 IFFO2Q5TF58 517 aa16.67■□□□□ 0.26
KNSTRN-206ENST00000559304 REREQ9P2R6 1566 aa16.65■□□□□ 0.26
KNSTRN-206ENST00000559304 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
KNSTRN-206ENST00000559304 DIP2CQ9Y2E4 1556 aa16.64■□□□□ 0.25
KNSTRN-206ENST00000559304 MYT1LQ9UL68 1186 aa16.64■□□□□ 0.25
KNSTRN-206ENST00000559304 LRRC7Q96NW7 1537 aa16.63■□□□□ 0.25
KNSTRN-206ENST00000559304 MROH2AA6NES4 1674 aa16.62■□□□□ 0.25
KNSTRN-206ENST00000559304 NEURL4Q96JN8 1562 aa16.61■□□□□ 0.25
KNSTRN-206ENST00000559304 RAPGEF6Q8TEU7 1601 aa16.61■□□□□ 0.25
KNSTRN-206ENST00000559304 POLR1AO95602 1720 aaPredicted RBP16.61■□□□□ 0.25
KNSTRN-206ENST00000559304 ZMYM3Q14202 1370 aa16.6■□□□□ 0.25
KNSTRN-206ENST00000559304 P3H3Q8IVL6 736 aa16.59■□□□□ 0.25
KNSTRN-206ENST00000559304 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
KNSTRN-206ENST00000559304 PLEKHD1A6NEE1 506 aa16.58■□□□□ 0.24
KNSTRN-206ENST00000559304 ABCA6Q8N139 1617 aa16.57■□□□□ 0.24
KNSTRN-206ENST00000559304 KDM5CP41229 1560 aa16.56■□□□□ 0.24
KNSTRN-206ENST00000559304 SETBP1Q9Y6X0 1596 aa16.55■□□□□ 0.24
KNSTRN-206ENST00000559304 RBM33Q96EV2 1170 aaKnown RBP16.55■□□□□ 0.24
KNSTRN-206ENST00000559304 ZRANB1Q9UGI0 708 aa16.55■□□□□ 0.24
KNSTRN-206ENST00000559304 NUP153P49790 1475 aaKnown RBP16.54■□□□□ 0.24
KNSTRN-206ENST00000559304 AFAP1Q8N556 730 aa16.54■□□□□ 0.24
KNSTRN-206ENST00000559304 PLCH2O75038 1416 aa16.53■□□□□ 0.24
KNSTRN-206ENST00000559304 DNMT1P26358 1616 aaKnown RBP16.53■□□□□ 0.24
KNSTRN-206ENST00000559304 SYNMO15061 1565 aa16.53■□□□□ 0.24
KNSTRN-206ENST00000559304 A2ML1A8K2U0 1454 aa16.51■□□□□ 0.23
KNSTRN-206ENST00000559304 STRCP1A6NGW2 1772 aa16.5■□□□□ 0.23
KNSTRN-206ENST00000559304 ZNF772Q68DY9 489 aaPredicted RBP16.49■□□□□ 0.23
KNSTRN-206ENST00000559304 FAM135BQ49AJ0 1406 aa16.48■□□□□ 0.23
KNSTRN-206ENST00000559304 RXRBP28702 533 aa16.47■□□□□ 0.23
KNSTRN-206ENST00000559304 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
KNSTRN-206ENST00000559304 CLTCQ00610 1675 aaKnown RBP16.46■□□□□ 0.23
KNSTRN-206ENST00000559304 CDK12Q9NYV4 1490 aaPredicted RBP16.45■□□□□ 0.22
KNSTRN-206ENST00000559304 MLH3Q9UHC1 1453 aa16.45■□□□□ 0.22
KNSTRN-206ENST00000559304 NPHP4O75161 1426 aaPredicted RBP16.45■□□□□ 0.22
KNSTRN-206ENST00000559304 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
KNSTRN-206ENST00000559304 CDK13Q14004 1512 aaKnown RBP16.42■□□□□ 0.22
KNSTRN-206ENST00000559304 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
KNSTRN-206ENST00000559304 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
KNSTRN-206ENST00000559304 MED14O60244 1454 aa16.4■□□□□ 0.22
KNSTRN-206ENST00000559304 ROBO1Q9Y6N7 1651 aa16.4■□□□□ 0.22
KNSTRN-206ENST00000559304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.39■□□□□ 0.21
KNSTRN-206ENST00000559304 JCADQ9P266 1359 aa16.39■□□□□ 0.21
KNSTRN-206ENST00000559304 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
KNSTRN-206ENST00000559304 IQGAP1P46940 1657 aa16.39■□□□□ 0.21
KNSTRN-206ENST00000559304 LRP6O75581 1613 aa16.37■□□□□ 0.21
KNSTRN-206ENST00000559304 DEPDC5O75140 1603 aa16.37■□□□□ 0.21
KNSTRN-206ENST00000559304 ABCC1P33527 1531 aa16.36■□□□□ 0.21
KNSTRN-206ENST00000559304 ITSN2Q9NZM3 1697 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms