RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 ATP10AO60312 1499 aa12.85□□□□□ -0.35
HMG20A-207ENST00000559035 SCAPERQ9BY12 1400 aa12.85□□□□□ -0.35
HMG20A-207ENST00000559035 MYO5CQ9NQX4 1742 aa12.85□□□□□ -0.35
HMG20A-207ENST00000559035 PLEKHD1A6NEE1 506 aa12.84□□□□□ -0.35
HMG20A-207ENST00000559035 CSRNP3Q8WYN3 585 aa12.84□□□□□ -0.35
HMG20A-207ENST00000559035 SPATA31D1Q6ZQQ2 1576 aa12.84□□□□□ -0.35
HMG20A-207ENST00000559035 DIP2CQ9Y2E4 1556 aa12.83□□□□□ -0.36
HMG20A-207ENST00000559035 EEA1Q15075 1411 aa12.83□□□□□ -0.36
HMG20A-207ENST00000559035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.83□□□□□ -0.36
HMG20A-207ENST00000559035 HNRNPUL2Q1KMD3 747 aaKnown RBP12.83□□□□□ -0.36
HMG20A-207ENST00000559035 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
HMG20A-207ENST00000559035 KIF14Q15058 1648 aa12.81□□□□□ -0.36
HMG20A-207ENST00000559035 ZNF518AQ6AHZ1 1483 aa12.81□□□□□ -0.36
HMG20A-207ENST00000559035 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
HMG20A-207ENST00000559035 LTBP4Q8N2S1 1624 aa12.8□□□□□ -0.36
HMG20A-207ENST00000559035 C3P01024 1663 aa12.8□□□□□ -0.36
HMG20A-207ENST00000559035 PTPRTO14522 1441 aa12.79□□□□□ -0.36
HMG20A-207ENST00000559035 UHRF1BP1Q6BDS2 1440 aa12.79□□□□□ -0.36
HMG20A-207ENST00000559035 SOCS7O14512 581 aa12.79□□□□□ -0.36
HMG20A-207ENST00000559035 DISP3Q9P2K9 1392 aa12.79□□□□□ -0.36
HMG20A-207ENST00000559035 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
HMG20A-207ENST00000559035 AGLP35573 1532 aa12.78□□□□□ -0.36
HMG20A-207ENST00000559035 MLECQ14165 292 aa12.78□□□□□ -0.36
HMG20A-207ENST00000559035 PLPPR3Q6T4P5 718 aa12.78□□□□□ -0.36
HMG20A-207ENST00000559035 SETD1BQ9UPS6 1966 aaKnown RBP12.76□□□□□ -0.37
HMG20A-207ENST00000559035 MLH3Q9UHC1 1453 aa12.76□□□□□ -0.37
HMG20A-207ENST00000559035 ABCC1P33527 1531 aa12.75□□□□□ -0.37
HMG20A-207ENST00000559035 CEBPAP49715 358 aaPredicted RBP12.75□□□□□ -0.37
HMG20A-207ENST00000559035 NCOA1Q15788 1441 aa12.75□□□□□ -0.37
HMG20A-207ENST00000559035 LRRIQ1Q96JM4 1722 aa12.75□□□□□ -0.37
HMG20A-207ENST00000559035 TROQ12816 1431 aaPredicted RBP12.74□□□□□ -0.37
HMG20A-207ENST00000559035 PREX2Q70Z35 1606 aa12.73□□□□□ -0.37
HMG20A-207ENST00000559035 ARHGAP5Q13017 1502 aa12.73□□□□□ -0.37
HMG20A-207ENST00000559035 DMRT2Q9Y5R5 561 aa12.73□□□□□ -0.37
HMG20A-207ENST00000559035 CDC42BPBQ9Y5S2 1711 aa12.73□□□□□ -0.37
HMG20A-207ENST00000559035 ITSN2Q9NZM3 1697 aa12.73□□□□□ -0.37
HMG20A-207ENST00000559035 ARHGAP35Q9NRY4 1499 aa12.72□□□□□ -0.37
HMG20A-207ENST00000559035 FMN1Q68DA7 1419 aa12.72□□□□□ -0.37
HMG20A-207ENST00000559035 MROH2AA6NES4 1674 aa12.71□□□□□ -0.37
HMG20A-207ENST00000559035 EFCAB2Q5VUJ9 269 aa12.71□□□□□ -0.37
HMG20A-207ENST00000559035 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.38
HMG20A-207ENST00000559035 RANGAP1P46060 587 aaPredicted RBP12.7□□□□□ -0.38
HMG20A-207ENST00000559035 TRAPPC8Q9Y2L5 1435 aa12.7□□□□□ -0.38
HMG20A-207ENST00000559035 ZNF142P52746 1687 aaPredicted RBP12.69□□□□□ -0.38
HMG20A-207ENST00000559035 CNTLNQ9NXG0 1405 aa12.68□□□□□ -0.38
HMG20A-207ENST00000559035 AFAP1Q8N556 730 aa12.67□□□□□ -0.38
HMG20A-207ENST00000559035 NPATQ14207 1427 aa12.67□□□□□ -0.38
HMG20A-207ENST00000559035 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
HMG20A-207ENST00000559035 PLXNC1O60486 1568 aa12.66□□□□□ -0.38
HMG20A-207ENST00000559035 CLIP1P30622 1438 aa12.66□□□□□ -0.38
HMG20A-207ENST00000559035 MYO3AQ8NEV4 1616 aa12.66□□□□□ -0.38
HMG20A-207ENST00000559035 CDC42BPAQ5VT25 1732 aa12.65□□□□□ -0.38
HMG20A-207ENST00000559035 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
HMG20A-207ENST00000559035 PLA2R1Q13018 1463 aa12.64□□□□□ -0.39
HMG20A-207ENST00000559035 TCOF1Q13428 1488 aaKnown RBP12.64□□□□□ -0.39
HMG20A-207ENST00000559035 INO80Q9ULG1 1556 aaPredicted RBP12.62□□□□□ -0.39
HMG20A-207ENST00000559035 CDK11AQ9UQ88 783 aaPredicted RBP12.61□□□□□ -0.39
HMG20A-207ENST00000559035 CEP170BQ9Y4F5 1589 aaPredicted RBP12.6□□□□□ -0.39
HMG20A-207ENST00000559035 CCDC18Q5T9S5 1454 aa12.6□□□□□ -0.39
HMG20A-207ENST00000559035 SYCP2Q9BX26 1530 aa12.6□□□□□ -0.39
HMG20A-207ENST00000559035 CLTCQ00610 1675 aaKnown RBP12.58□□□□□ -0.4
HMG20A-207ENST00000559035 CASKIN1Q8WXD9 1431 aa12.58□□□□□ -0.4
HMG20A-207ENST00000559035 ZNF335Q9H4Z2 1342 aaPredicted RBP12.58□□□□□ -0.4
HMG20A-207ENST00000559035 ATP7AQ04656 1500 aa12.57□□□□□ -0.4
HMG20A-207ENST00000559035 PTPRKQ15262 1439 aa12.57□□□□□ -0.4
HMG20A-207ENST00000559035 SUPT6HQ7KZ85 1726 aaKnown RBP12.56□□□□□ -0.4
HMG20A-207ENST00000559035 MED1Q15648 1581 aaPredicted RBP12.56□□□□□ -0.4
HMG20A-207ENST00000559035 ZMYM3Q14202 1370 aa12.56□□□□□ -0.4
HMG20A-207ENST00000559035 NEURL4Q96JN8 1562 aa12.55□□□□□ -0.4
HMG20A-207ENST00000559035 FYCO1Q9BQS8 1478 aa12.54□□□□□ -0.4
HMG20A-207ENST00000559035 GPATCH8Q9UKJ3 1502 aaKnown RBP12.53□□□□□ -0.4
HMG20A-207ENST00000559035 KIAA1107Q9UPP5 1409 aa12.53□□□□□ -0.4
HMG20A-207ENST00000559035 A2MP01023 1474 aa12.53□□□□□ -0.4
HMG20A-207ENST00000559035 DNMT1P26358 1616 aaKnown RBP12.52□□□□□ -0.4
HMG20A-207ENST00000559035 POLR1AO95602 1720 aaPredicted RBP12.52□□□□□ -0.41
HMG20A-207ENST00000559035 ESF1Q9H501 851 aaKnown RBP12.52□□□□□ -0.41
HMG20A-207ENST00000559035 MYT1LQ9UL68 1186 aa12.52□□□□□ -0.41
HMG20A-207ENST00000559035 ATP1B4Q9UN42 357 aaPredicted RBP12.52□□□□□ -0.41
HMG20A-207ENST00000559035 NCKAP5LQ9HCH0 1330 aa12.52□□□□□ -0.41
HMG20A-207ENST00000559035 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
HMG20A-207ENST00000559035 PKD2Q13563 968 aa12.51□□□□□ -0.41
HMG20A-207ENST00000559035 A2ML1A8K2U0 1454 aa12.51□□□□□ -0.41
HMG20A-207ENST00000559035 ADGBQ8N7X0 1667 aa12.51□□□□□ -0.41
HMG20A-207ENST00000559035 PLEKHH2Q8IVE3 1493 aa12.5□□□□□ -0.41
HMG20A-207ENST00000559035 CPS1P31327 1500 aa12.5□□□□□ -0.41
HMG20A-207ENST00000559035 UBAP1LF5GYI3 381 aa12.49□□□□□ -0.41
HMG20A-207ENST00000559035 FAM135AQ9P2D6 1515 aa12.48□□□□□ -0.41
HMG20A-207ENST00000559035 SPAG9O60271 1321 aaKnown RBP12.48□□□□□ -0.41
HMG20A-207ENST00000559035 UBTFP17480 764 aaKnown RBP12.48□□□□□ -0.41
HMG20A-207ENST00000559035 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
HMG20A-207ENST00000559035 TIAM1Q13009 1591 aa12.45□□□□□ -0.42
HMG20A-207ENST00000559035 PPP6R1Q9UPN7 881 aa12.45□□□□□ -0.42
HMG20A-207ENST00000559035 MBD5Q9P267 1494 aa12.45□□□□□ -0.42
HMG20A-207ENST00000559035 SHANK2Q9UPX8 1470 aa12.45□□□□□ -0.42
HMG20A-207ENST00000559035 KDM5DQ9BY66 1539 aa12.44□□□□□ -0.42
HMG20A-207ENST00000559035 PZPP20742 1482 aa12.44□□□□□ -0.42
HMG20A-207ENST00000559035 DEPDC5O75140 1603 aa12.44□□□□□ -0.42
HMG20A-207ENST00000559035 MED14O60244 1454 aa12.42□□□□□ -0.42
HMG20A-207ENST00000559035 HSPA1LP34931 641 aa12.42□□□□□ -0.42
HMG20A-207ENST00000559035 HNRNPMP52272 730 aaKnown RBP eCLIP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms