RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 CDK13Q14004 1512 aaKnown RBP12.66□□□□□ -0.38
EXD1-204ENST00000558881 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
EXD1-204ENST00000558881 FGD6Q6ZV73 1430 aa12.65□□□□□ -0.38
EXD1-204ENST00000558881 HECW1Q76N89 1606 aa12.65□□□□□ -0.38
EXD1-204ENST00000558881 RAB3GAP2Q9H2M9 1393 aa12.64□□□□□ -0.39
EXD1-204ENST00000558881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.63□□□□□ -0.39
EXD1-204ENST00000558881 EHBP1L1Q8N3D4 1523 aa12.63□□□□□ -0.39
EXD1-204ENST00000558881 SETD5Q9C0A6 1442 aa12.62□□□□□ -0.39
EXD1-204ENST00000558881 MYOM3Q5VTT5 1437 aa12.62□□□□□ -0.39
EXD1-204ENST00000558881 NUP153P49790 1475 aaKnown RBP12.61□□□□□ -0.39
EXD1-204ENST00000558881 ARHGEF11O15085 1522 aa12.6□□□□□ -0.39
EXD1-204ENST00000558881 CARMIL2Q6F5E8 1435 aa12.6□□□□□ -0.39
EXD1-204ENST00000558881 PLB1Q6P1J6 1458 aa12.6□□□□□ -0.39
EXD1-204ENST00000558881 SUPT6HQ7KZ85 1726 aaKnown RBP12.59□□□□□ -0.39
EXD1-204ENST00000558881 PTPRKQ15262 1439 aa12.59□□□□□ -0.39
EXD1-204ENST00000558881 RAPGEF6Q8TEU7 1601 aa12.58□□□□□ -0.4
EXD1-204ENST00000558881 PRG4Q92954 1404 aaPredicted RBP12.55□□□□□ -0.4
EXD1-204ENST00000558881 CDK11AQ9UQ88 783 aaPredicted RBP12.54□□□□□ -0.4
EXD1-204ENST00000558881 PTPN23Q9H3S7 1636 aa12.53□□□□□ -0.4
EXD1-204ENST00000558881 ERICH6Q7L0X2 663 aa12.53□□□□□ -0.4
EXD1-204ENST00000558881 CHIC2Q9UKJ5 165 aa12.52□□□□□ -0.41
EXD1-204ENST00000558881 CHD1O14646 1710 aa12.51□□□□□ -0.41
EXD1-204ENST00000558881 TCOF1Q13428 1488 aaKnown RBP12.51□□□□□ -0.41
EXD1-204ENST00000558881 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
EXD1-204ENST00000558881 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
EXD1-204ENST00000558881 PTPRGP23470 1445 aa12.5□□□□□ -0.41
EXD1-204ENST00000558881 MIA2Q96PC5 1412 aa12.5□□□□□ -0.41
EXD1-204ENST00000558881 ZNF644Q9H582 1327 aaPredicted RBP12.5□□□□□ -0.41
EXD1-204ENST00000558881 TROQ12816 1431 aaPredicted RBP12.49□□□□□ -0.41
EXD1-204ENST00000558881 RRP7BPQ9NSQ0 103 aa12.49□□□□□ -0.41
EXD1-204ENST00000558881 RBM19Q9Y4C8 960 aaKnown RBP12.49□□□□□ -0.41
EXD1-204ENST00000558881 HFM1A2PYH4 1435 aa12.49□□□□□ -0.41
EXD1-204ENST00000558881 ABCA8O94911 1581 aa12.49□□□□□ -0.41
EXD1-204ENST00000558881 NAIPQ13075 1403 aa12.48□□□□□ -0.41
EXD1-204ENST00000558881 ATP10BO94823 1461 aa12.48□□□□□ -0.41
EXD1-204ENST00000558881 SIN3AQ96ST3 1273 aa12.48□□□□□ -0.41
EXD1-204ENST00000558881 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
EXD1-204ENST00000558881 PLEKHD1A6NEE1 506 aa12.46□□□□□ -0.41
EXD1-204ENST00000558881 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
EXD1-204ENST00000558881 ERCC6L2Q5T890 1561 aa12.44□□□□□ -0.42
EXD1-204ENST00000558881 CFDP1Q9UEE9 299 aaPredicted RBP12.44□□□□□ -0.42
EXD1-204ENST00000558881 KIF14Q15058 1648 aa12.43□□□□□ -0.42
EXD1-204ENST00000558881 GPATCH8Q9UKJ3 1502 aaKnown RBP12.43□□□□□ -0.42
EXD1-204ENST00000558881 ZNF777Q9ULD5 760 aaPredicted RBP12.42□□□□□ -0.42
EXD1-204ENST00000558881 SHROOM2Q13796 1616 aa12.42□□□□□ -0.42
EXD1-204ENST00000558881 ABCC5O15440 1437 aa12.42□□□□□ -0.42
EXD1-204ENST00000558881 DAPK1P53355 1430 aa12.41□□□□□ -0.42
EXD1-204ENST00000558881 UACAQ9BZF9 1416 aa12.41□□□□□ -0.42
EXD1-204ENST00000558881 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
EXD1-204ENST00000558881 TRIM52Q96A61 297 aa12.38□□□□□ -0.43
EXD1-204ENST00000558881 CLASP1Q7Z460 1538 aa12.38□□□□□ -0.43
EXD1-204ENST00000558881 KDM6BO15054 1643 aa12.38□□□□□ -0.43
EXD1-204ENST00000558881 ADCY10Q96PN6 1610 aa12.38□□□□□ -0.43
EXD1-204ENST00000558881 ABCC10Q5T3U5 1492 aa12.38□□□□□ -0.43
EXD1-204ENST00000558881 CAMSAP2Q08AD1 1489 aa12.37□□□□□ -0.43
EXD1-204ENST00000558881 AKNAQ7Z591 1439 aa12.37□□□□□ -0.43
EXD1-204ENST00000558881 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
EXD1-204ENST00000558881 FANCIQ9NVI1 1328 aa12.37□□□□□ -0.43
EXD1-204ENST00000558881 BCANQ96GW7 911 aa12.36□□□□□ -0.43
EXD1-204ENST00000558881 ROCK1Q13464 1354 aa12.36□□□□□ -0.43
EXD1-204ENST00000558881 DNMT1P26358 1616 aaKnown RBP12.35□□□□□ -0.43
EXD1-204ENST00000558881 SPINK5Q9NQ38 1064 aaPredicted RBP12.34□□□□□ -0.43
EXD1-204ENST00000558881 PROM2Q8N271 834 aa12.33□□□□□ -0.44
EXD1-204ENST00000558881 GCC2Q8IWJ2 1684 aa12.33□□□□□ -0.44
EXD1-204ENST00000558881 DENND4BO75064 1496 aaPredicted RBP12.32□□□□□ -0.44
EXD1-204ENST00000558881 MPHOSPH9Q99550 1183 aa12.32□□□□□ -0.44
EXD1-204ENST00000558881 TIMELESSQ9UNS1 1208 aa12.32□□□□□ -0.44
EXD1-204ENST00000558881 ITSN2Q9NZM3 1697 aa12.32□□□□□ -0.44
EXD1-204ENST00000558881 ABCC2Q92887 1545 aa12.32□□□□□ -0.44
EXD1-204ENST00000558881 PPP1R15AO75807 674 aaPredicted RBP12.32□□□□□ -0.44
EXD1-204ENST00000558881 VASPP50552 380 aaPredicted RBP12.32□□□□□ -0.44
EXD1-204ENST00000558881 POLA2Q14181 598 aa12.32□□□□□ -0.44
EXD1-204ENST00000558881 HNRNPMP52272 730 aaKnown RBP eCLIP12.31□□□□□ -0.44
EXD1-204ENST00000558881 KCNH8Q96L42 1107 aa12.31□□□□□ -0.44
EXD1-204ENST00000558881 NCOA1Q15788 1441 aa12.31□□□□□ -0.44
EXD1-204ENST00000558881 CDC42BPAQ5VT25 1732 aa12.3□□□□□ -0.44
EXD1-204ENST00000558881 NEFLP07196 543 aa12.3□□□□□ -0.44
EXD1-204ENST00000558881 TONSLQ96HA7 1378 aa12.27□□□□□ -0.44
EXD1-204ENST00000558881 ANKRD30AQ9BXX3 1397 aa12.26□□□□□ -0.45
EXD1-204ENST00000558881 TSPY4P0CV99 314 aa12.26□□□□□ -0.45
EXD1-204ENST00000558881 TSPY10P0CW01 314 aa12.26□□□□□ -0.45
EXD1-204ENST00000558881 UHRF1BP1LA0JNW5 1464 aa12.26□□□□□ -0.45
EXD1-204ENST00000558881 ADGRL2O95490 1459 aa12.26□□□□□ -0.45
EXD1-204ENST00000558881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.25□□□□□ -0.45
EXD1-204ENST00000558881 MBD5Q9P267 1494 aa12.25□□□□□ -0.45
EXD1-204ENST00000558881 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
EXD1-204ENST00000558881 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
EXD1-204ENST00000558881 C9orf84Q5VXU9 1444 aa12.25□□□□□ -0.45
EXD1-204ENST00000558881 KDM5BQ9UGL1 1544 aa12.24□□□□□ -0.45
EXD1-204ENST00000558881 CAPN15O75808 1086 aa12.24□□□□□ -0.45
EXD1-204ENST00000558881 TTC37Q6PGP7 1564 aa12.24□□□□□ -0.45
EXD1-204ENST00000558881 ZCCHC11Q5TAX3 1644 aaKnown RBP12.23□□□□□ -0.45
EXD1-204ENST00000558881 DEKP35659 375 aaKnown RBP12.23□□□□□ -0.45
EXD1-204ENST00000558881 SAMD9LQ8IVG5 1584 aa12.23□□□□□ -0.45
EXD1-204ENST00000558881 CROCC2H7BZ55 1655 aa12.23□□□□□ -0.45
EXD1-204ENST00000558881 CDC42BPBQ9Y5S2 1711 aa12.22□□□□□ -0.45
EXD1-204ENST00000558881 HIRIP3Q9BW71 556 aaPredicted RBP12.22□□□□□ -0.45
EXD1-204ENST00000558881 ANKRD30BQ9BXX2 1392 aa12.22□□□□□ -0.45
EXD1-204ENST00000558881 ANKRD50Q9ULJ7 1429 aa12.22□□□□□ -0.45
EXD1-204ENST00000558881 PREX2Q70Z35 1606 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms